RNA–Protein interactions for RNA: ENST00000543419.5

ECHDC2-224, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 3

Gene ECHDC2, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-224ENST00000543419 DDX54Q8TDD1 881 aaKnown RBP11.93□□□□□ -0.5
ECHDC2-224ENST00000543419 TESK2Q96S53 571 aa11.93□□□□□ -0.5
ECHDC2-224ENST00000543419 RGPD2P0DJD1 1756 aa11.92□□□□□ -0.5
ECHDC2-224ENST00000543419 FBLN1P23142 703 aa11.92□□□□□ -0.5
ECHDC2-224ENST00000543419 COL23A1Q86Y22 540 aaPredicted RBP11.92□□□□□ -0.5
ECHDC2-224ENST00000543419 TMC1Q8TDI8 760 aa11.92□□□□□ -0.5
ECHDC2-224ENST00000543419 TERF2IPQ9NYB0 399 aa11.92□□□□□ -0.5
ECHDC2-224ENST00000543419 TFCP2L1Q9NZI6 479 aa11.92□□□□□ -0.5
ECHDC2-224ENST00000543419 POLD1P28340 1107 aa11.91□□□□□ -0.5
ECHDC2-224ENST00000543419 NEUROD1Q13562 356 aa11.91□□□□□ -0.5
ECHDC2-224ENST00000543419 CARD11Q9BXL7 1154 aa11.91□□□□□ -0.5
ECHDC2-224ENST00000543419 ZCRB1Q8TBF4 217 aaKnown RBP11.9□□□□□ -0.5
ECHDC2-224ENST00000543419 GIGYF1O75420 1035 aaPredicted RBP11.89□□□□□ -0.51
ECHDC2-224ENST00000543419 NBPF6Q5VWK0 638 aa11.89□□□□□ -0.51
ECHDC2-224ENST00000543419 LTV1Q96GA3 475 aaPredicted RBP11.89□□□□□ -0.51
ECHDC2-224ENST00000543419 NBPF4Q96M43 638 aa11.89□□□□□ -0.51
ECHDC2-224ENST00000543419 RTL1A6NKG5 1358 aa11.89□□□□□ -0.51
ECHDC2-224ENST00000543419 ADCY9O60503 1353 aa11.89□□□□□ -0.51
ECHDC2-224ENST00000543419 CCNL1Q9UK58 526 aaPredicted RBP11.88□□□□□ -0.51
ECHDC2-224ENST00000543419 CGNL1Q0VF96 1302 aa11.87□□□□□ -0.51
ECHDC2-224ENST00000543419 TOGARAM1Q9Y4F4 1720 aa11.87□□□□□ -0.51
ECHDC2-224ENST00000543419 GRIN3BO60391 1043 aa11.87□□□□□ -0.51
ECHDC2-224ENST00000543419 IFFO2Q5TF58 517 aa11.87□□□□□ -0.51
ECHDC2-224ENST00000543419 AMIGO3Q86WK7 504 aa11.87□□□□□ -0.51
ECHDC2-224ENST00000543419 SYTL4Q96C24 671 aaPredicted RBP11.87□□□□□ -0.51
ECHDC2-224ENST00000543419 TAF1LQ8IZX4 1826 aa11.87□□□□□ -0.51
ECHDC2-224ENST00000543419 C5P01031 1676 aa11.87□□□□□ -0.51
ECHDC2-224ENST00000543419 FYB1O15117 783 aa11.86□□□□□ -0.51
ECHDC2-224ENST00000543419 KLHL34Q8N239 644 aa11.86□□□□□ -0.51
ECHDC2-224ENST00000543419 COG3Q96JB2 828 aa11.86□□□□□ -0.51
ECHDC2-224ENST00000543419 CD2APQ9Y5K6 639 aa11.86□□□□□ -0.51
ECHDC2-224ENST00000543419 USP47Q96K76 1375 aa11.86□□□□□ -0.51
ECHDC2-224ENST00000543419 NCAPD2Q15021 1401 aa11.86□□□□□ -0.51
ECHDC2-224ENST00000543419 ATP10DQ9P241 1426 aa11.86□□□□□ -0.51
ECHDC2-224ENST00000543419 AMPHP49418 695 aa11.85□□□□□ -0.51
ECHDC2-224ENST00000543419 RRS1Q15050 365 aaKnown RBP11.85□□□□□ -0.51
ECHDC2-224ENST00000543419 MAP2P11137 1827 aaKnown RBP11.84□□□□□ -0.51
ECHDC2-224ENST00000543419 ST20-MTHFSA0A0A6YYL1 179 aa11.84□□□□□ -0.51
ECHDC2-224ENST00000543419 CYP27B1O15528 508 aa11.84□□□□□ -0.51
ECHDC2-224ENST00000543419 MSL1Q68DK7 614 aa11.84□□□□□ -0.51
ECHDC2-224ENST00000543419 PELP1Q8IZL8 1130 aaKnown RBP11.84□□□□□ -0.51
ECHDC2-224ENST00000543419 INSRP06213 1382 aa11.83□□□□□ -0.52
ECHDC2-224ENST00000543419 PALLDQ8WX93 1383 aa11.83□□□□□ -0.52
ECHDC2-224ENST00000543419 USHBP1Q8N6Y0 703 aa11.83□□□□□ -0.52
ECHDC2-224ENST00000543419 C4BP0C0L5 1744 aa11.83□□□□□ -0.52
ECHDC2-224ENST00000543419 UBR3Q6ZT12 1888 aa11.83□□□□□ -0.52
ECHDC2-224ENST00000543419 KIF24Q5T7B8 1368 aa11.82□□□□□ -0.52
ECHDC2-224ENST00000543419 HSP90AB2PQ58FF8 381 aa11.82□□□□□ -0.52
ECHDC2-224ENST00000543419 PKD1L3Q7Z443 1732 aa11.82□□□□□ -0.52
ECHDC2-224ENST00000543419 ITGB4P16144 1822 aa11.81□□□□□ -0.52
ECHDC2-224ENST00000543419 NKX1-1Q15270 411 aaPredicted RBP11.81□□□□□ -0.52
ECHDC2-224ENST00000543419 FLAD1Q8NFF5 587 aa11.81□□□□□ -0.52
ECHDC2-224ENST00000543419 PCDH11XQ9BZA7 1347 aa11.81□□□□□ -0.52
ECHDC2-224ENST00000543419 PCDH11YQ9BZA8 1340 aa11.81□□□□□ -0.52
ECHDC2-224ENST00000543419 CICQ96RK0 1608 aaPredicted RBP11.8□□□□□ -0.52
ECHDC2-224ENST00000543419 RAPGEF4Q8WZA2 1011 aa11.8□□□□□ -0.52
ECHDC2-224ENST00000543419 GGNBP2Q9H3C7 697 aa11.8□□□□□ -0.52
ECHDC2-224ENST00000543419 FLT4P35916 1363 aa11.79□□□□□ -0.52
ECHDC2-224ENST00000543419 MSH5O43196 834 aa11.79□□□□□ -0.52
ECHDC2-224ENST00000543419 SLC24A1O60721 1099 aa11.79□□□□□ -0.52
ECHDC2-224ENST00000543419 TATP17735 454 aaPredicted RBP11.79□□□□□ -0.52
ECHDC2-224ENST00000543419 SMIM5Q71RC9 77 aa11.79□□□□□ -0.52
ECHDC2-224ENST00000543419 PIGBQ92521 554 aa11.79□□□□□ -0.52
ECHDC2-224ENST00000543419 ANKRD26Q9UPS8 1709 aa11.78□□□□□ -0.52
ECHDC2-224ENST00000543419 HSPA6P17066 643 aa11.78□□□□□ -0.52
ECHDC2-224ENST00000543419 HMGB2P26583 209 aaKnown RBP11.78□□□□□ -0.52
ECHDC2-224ENST00000543419 MPRIPQ6WCQ1 1025 aa11.78□□□□□ -0.52
ECHDC2-224ENST00000543419 CARD14Q9BXL6 1004 aa11.78□□□□□ -0.52
ECHDC2-224ENST00000543419 TONSLQ96HA7 1378 aa11.78□□□□□ -0.52
ECHDC2-224ENST00000543419 SMG6Q86US8 1419 aaKnown RBP11.77□□□□□ -0.52
ECHDC2-224ENST00000543419 KIAA1551Q9HCM1 1747 aa11.77□□□□□ -0.52
ECHDC2-224ENST00000543419 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.77□□□□□ -0.53
ECHDC2-224ENST00000543419 KIF3CO14782 793 aa11.77□□□□□ -0.53
ECHDC2-224ENST00000543419 SSFA2P28290 1259 aa11.77□□□□□ -0.53
ECHDC2-224ENST00000543419 LINC00116Q8NCU8 138 aa11.77□□□□□ -0.53
ECHDC2-224ENST00000543419 SMARCC1Q92922 1105 aaPredicted RBP11.77□□□□□ -0.53
ECHDC2-224ENST00000543419 GPBP1L1Q9HC44 474 aaPredicted RBP11.77□□□□□ -0.53
ECHDC2-224ENST00000543419 IGSF1Q8N6C5 1336 aa11.77□□□□□ -0.53
ECHDC2-224ENST00000543419 KIF13BQ9NQT8 1826 aa11.76□□□□□ -0.53
ECHDC2-224ENST00000543419 KIF20BQ96Q89 1820 aa11.76□□□□□ -0.53
ECHDC2-224ENST00000543419 NSD3Q9BZ95 1437 aa11.76□□□□□ -0.53
ECHDC2-224ENST00000543419 LOC102724428A0A0B4J2F2 783 aa11.75□□□□□ -0.53
ECHDC2-224ENST00000543419 SIK1P57059 783 aa11.75□□□□□ -0.53
ECHDC2-224ENST00000543419 ITPK1Q13572 414 aa11.75□□□□□ -0.53
ECHDC2-224ENST00000543419 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.75□□□□□ -0.534e-7■□□□□ 10.6
ECHDC2-224ENST00000543419 EMILIN1Q9Y6C2 1016 aa11.75□□□□□ -0.53
ECHDC2-224ENST00000543419 AK7Q96M32 723 aa11.74□□□□□ -0.53
ECHDC2-224ENST00000543419 KDRP35968 1356 aa11.74□□□□□ -0.53
ECHDC2-224ENST00000543419 PXDNLA1KZ92 1463 aa11.74□□□□□ -0.53
ECHDC2-224ENST00000543419 TMF1P82094 1093 aa11.73□□□□□ -0.53
ECHDC2-224ENST00000543419 ZNF831Q5JPB2 1677 aa11.73□□□□□ -0.53
ECHDC2-224ENST00000543419 WASHC2AQ641Q2 1341 aa11.73□□□□□ -0.53
ECHDC2-224ENST00000543419 SLC4A9Q96Q91 983 aa11.73□□□□□ -0.53
ECHDC2-224ENST00000543419 EYA1Q99502 592 aa11.73□□□□□ -0.53
ECHDC2-224ENST00000543419 ASAP1Q9ULH1 1129 aa11.73□□□□□ -0.53
ECHDC2-224ENST00000543419 PLEKHG2Q9H7P9 1386 aa11.72□□□□□ -0.53
ECHDC2-224ENST00000543419 PHF14O94880 888 aa11.72□□□□□ -0.53
ECHDC2-224ENST00000543419 DNAJC5GQ8N7S2 189 aa11.72□□□□□ -0.53
ECHDC2-224ENST00000543419 ATG3Q9NT62 314 aa11.72□□□□□ -0.53
ECHDC2-224ENST00000543419 C10orf71Q711Q0 1435 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms