RNA–Protein interactions for RNA: ENST00000543322.5

PTCD2-212, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 2,029 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-212ENST00000543322 RTL1A6NKG5 1358 aa16.01■□□□□ 0.15
PTCD2-212ENST00000543322 IBTKQ9P2D0 1353 aaPredicted RBP16.01■□□□□ 0.15
PTCD2-212ENST00000543322 PRR36Q9H6K5 1346 aa16.01■□□□□ 0.15
PTCD2-212ENST00000543322 GAS2L3Q86XJ1 694 aa16.01■□□□□ 0.15
PTCD2-212ENST00000543322 RPAP2Q8IXW5 612 aaPredicted RBP16.01■□□□□ 0.15
PTCD2-212ENST00000543322 FOXD4L1Q9NU39 408 aa16.01■□□□□ 0.15
PTCD2-212ENST00000543322 TSPOAP1O95153 1857 aa16■□□□□ 0.15
PTCD2-212ENST00000543322 NCKAP5LQ9HCH0 1330 aa16■□□□□ 0.15
PTCD2-212ENST00000543322 FMN2Q9NZ56 1722 aa16■□□□□ 0.15
PTCD2-212ENST00000543322 CHL1O00533 1208 aa16■□□□□ 0.15
PTCD2-212ENST00000543322 EIF4A2Q14240 407 aaKnown RBP16■□□□□ 0.15
PTCD2-212ENST00000543322 CEP85Q6P2H3 762 aa16■□□□□ 0.15
PTCD2-212ENST00000543322 TXNDC2Q86VQ3 553 aa16■□□□□ 0.15
PTCD2-212ENST00000543322 PTPRCP08575 1304 aa16■□□□□ 0.15
PTCD2-212ENST00000543322 AEBP1Q8IUX7 1158 aa15.99■□□□□ 0.15
PTCD2-212ENST00000543322 USP26Q9BXU7 913 aa15.99■□□□□ 0.15
PTCD2-212ENST00000543322 CRB1P82279 1406 aa15.98■□□□□ 0.15
PTCD2-212ENST00000543322 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.98■□□□□ 0.15
PTCD2-212ENST00000543322 TUBGCP6Q96RT7 1819 aa15.98■□□□□ 0.15
PTCD2-212ENST00000543322 GOLGA6L22H0YM25 854 aa15.97■□□□□ 0.15
PTCD2-212ENST00000543322 BAG4O95429 457 aaKnown RBP15.97■□□□□ 0.15
PTCD2-212ENST00000543322 CYP2E1P05181 493 aaPredicted RBP15.97■□□□□ 0.15
PTCD2-212ENST00000543322 KRT24Q2M2I5 525 aa15.97■□□□□ 0.15
PTCD2-212ENST00000543322 KLHL40Q2TBA0 621 aa15.97■□□□□ 0.15
PTCD2-212ENST00000543322 SULT6B1Q6IMI4 303 aa15.97■□□□□ 0.15
PTCD2-212ENST00000543322 C16orf71Q8IYS4 520 aaPredicted RBP15.97■□□□□ 0.15
PTCD2-212ENST00000543322 UBR1Q8IWV7 1749 aa15.97■□□□□ 0.15
PTCD2-212ENST00000543322 AK9Q5TCS8 1911 aa15.96■□□□□ 0.15
PTCD2-212ENST00000543322 OTUD7AQ8TE49 926 aaPredicted RBP15.96■□□□□ 0.15
PTCD2-212ENST00000543322 TTC21BQ7Z4L5 1316 aa15.96■□□□□ 0.15
PTCD2-212ENST00000543322 USP31Q70CQ4 1352 aa15.96■□□□□ 0.14
PTCD2-212ENST00000543322 SDSP20132 328 aa15.95■□□□□ 0.14
PTCD2-212ENST00000543322 ESPNB1AK53 854 aa15.95■□□□□ 0.14
PTCD2-212ENST00000543322 LRRC37A3O60309 1634 aa15.95■□□□□ 0.14
PTCD2-212ENST00000543322 ERBB4Q15303 1308 aa15.95■□□□□ 0.14
PTCD2-212ENST00000543322 ARHGEF10O15013 1369 aa15.94■□□□□ 0.14
PTCD2-212ENST00000543322 ROBO2Q9HCK4 1378 aa15.94■□□□□ 0.14
PTCD2-212ENST00000543322 USP6P35125 1406 aa15.94■□□□□ 0.14
PTCD2-212ENST00000543322 N4BP2Q86UW6 1770 aaPredicted RBP15.94■□□□□ 0.14
PTCD2-212ENST00000543322 NUCB2P80303 420 aa15.94■□□□□ 0.14
PTCD2-212ENST00000543322 MEIS3Q99687 375 aa15.94■□□□□ 0.14
PTCD2-212ENST00000543322 FAM69CQ0P6D2 419 aa15.94■□□□□ 0.14
PTCD2-212ENST00000543322 CASC1Q6TDU7 716 aa15.94■□□□□ 0.14
PTCD2-212ENST00000543322 MCM10Q7L590 875 aa15.94■□□□□ 0.14
PTCD2-212ENST00000543322 FAM208AQ9UK61 1670 aaKnown RBP15.94■□□□□ 0.14
PTCD2-212ENST00000543322 RIMS1Q86UR5 1692 aaKnown RBP15.93■□□□□ 0.14
PTCD2-212ENST00000543322 ADAMTS13Q76LX8 1427 aa15.93■□□□□ 0.14
PTCD2-212ENST00000543322 SMARCA5O60264 1052 aaPredicted RBP15.92■□□□□ 0.14
PTCD2-212ENST00000543322 SSH2Q76I76 1423 aa15.92■□□□□ 0.14
PTCD2-212ENST00000543322 OSBPL3Q9H4L5 887 aa15.92■□□□□ 0.14
PTCD2-212ENST00000543322 CWC22Q9HCG8 908 aaKnown RBP15.92■□□□□ 0.14
PTCD2-212ENST00000543322 PLEKHG3A1L390 1219 aa15.91■□□□□ 0.14
PTCD2-212ENST00000543322 CCDC173Q0VFZ6 552 aa15.91■□□□□ 0.14
PTCD2-212ENST00000543322 PPP1R9BQ96SB3 815 aa15.91■□□□□ 0.14
PTCD2-212ENST00000543322 DDX49Q9Y6V7 483 aaKnown RBP15.91■□□□□ 0.14
PTCD2-212ENST00000543322 XRN1Q8IZH2 1706 aaKnown RBP15.91■□□□□ 0.14
PTCD2-212ENST00000543322 ST18O60284 1047 aa15.9■□□□□ 0.14
PTCD2-212ENST00000543322 HMMRO75330 724 aa15.9■□□□□ 0.14
PTCD2-212ENST00000543322 REC8O95072 547 aa15.9■□□□□ 0.14
PTCD2-212ENST00000543322 HDGFP51858 240 aaKnown RBP15.9■□□□□ 0.14
PTCD2-212ENST00000543322 ACEP12821 1306 aa15.9■□□□□ 0.14
PTCD2-212ENST00000543322 TMEM2Q9UHN6 1383 aa15.9■□□□□ 0.14
PTCD2-212ENST00000543322 ZNF445P59923 1031 aa15.9■□□□□ 0.14
PTCD2-212ENST00000543322 TRIM44Q96DX7 344 aaPredicted RBP15.9■□□□□ 0.14
PTCD2-212ENST00000543322 NAP1L5Q96NT1 182 aaPredicted RBP15.9■□□□□ 0.14
PTCD2-212ENST00000543322 TNRQ92752 1358 aa15.9■□□□□ 0.14
PTCD2-212ENST00000543322 ERC2O15083 957 aa15.89■□□□□ 0.13
PTCD2-212ENST00000543322 MLECQ14165 292 aa15.89■□□□□ 0.13
PTCD2-212ENST00000543322 LMBRD1Q9NUN5 540 aa15.89■□□□□ 0.13
PTCD2-212ENST00000543322 KDRP35968 1356 aa15.89■□□□□ 0.13
PTCD2-212ENST00000543322 NASPP49321 788 aaPredicted RBP15.89■□□□□ 0.13
PTCD2-212ENST00000543322 HSP90AB2PQ58FF8 381 aa15.89■□□□□ 0.13
PTCD2-212ENST00000543322 SLC4A2P04920 1241 aa15.88■□□□□ 0.13
PTCD2-212ENST00000543322 CCT4P50991 539 aaKnown RBP15.88■□□□□ 0.13
PTCD2-212ENST00000543322 MCTP1Q6DN14 999 aa15.88■□□□□ 0.13
PTCD2-212ENST00000543322 SALL3Q9BXA9 1300 aa15.87■□□□□ 0.13
PTCD2-212ENST00000543322 MAP3K19Q56UN5 1328 aa15.87■□□□□ 0.13
PTCD2-212ENST00000543322 APBB1O00213 710 aa15.87■□□□□ 0.13
PTCD2-212ENST00000543322 PDE1AP54750 535 aa15.87■□□□□ 0.13
PTCD2-212ENST00000543322 PKP1Q13835 747 aa15.87■□□□□ 0.13
PTCD2-212ENST00000543322 G2E3Q7L622 706 aa15.86■□□□□ 0.13
PTCD2-212ENST00000543322 UBE2Q2Q8WVN8 375 aa15.86■□□□□ 0.13
PTCD2-212ENST00000543322 SBNO1A3KN83 1393 aa15.86■□□□□ 0.13
PTCD2-212ENST00000543322 FLT4P35916 1363 aa15.86■□□□□ 0.13
PTCD2-212ENST00000543322 PLEKHG1Q9ULL1 1385 aa15.86■□□□□ 0.13
PTCD2-212ENST00000543322 CEP170BQ9Y4F5 1589 aaPredicted RBP15.86■□□□□ 0.13
PTCD2-212ENST00000543322 CYB5RLQ6IPT4 315 aa15.85■□□□□ 0.13
PTCD2-212ENST00000543322 ZGPATQ8N5A5 531 aaKnown RBP15.85■□□□□ 0.13
PTCD2-212ENST00000543322 ZDHHC9Q9Y397 364 aa15.85■□□□□ 0.13
PTCD2-212ENST00000543322 TTC21AQ8NDW8 1320 aa15.85■□□□□ 0.13
PTCD2-212ENST00000543322 CACNA1FO60840 1977 aa15.85■□□□□ 0.13
PTCD2-212ENST00000543322 ZSCAN23Q3MJ62 389 aa15.85■□□□□ 0.13
PTCD2-212ENST00000543322 TSPYL4Q9UJ04 414 aa15.85■□□□□ 0.13
PTCD2-212ENST00000543322 PIK3C2AO00443 1686 aa15.84■□□□□ 0.13
PTCD2-212ENST00000543322 MTHFSDQ2M296 383 aaKnown RBP15.84■□□□□ 0.13
PTCD2-212ENST00000543322 PXDNLA1KZ92 1463 aa15.84■□□□□ 0.13
PTCD2-212ENST00000543322 CAVIN1Q6NZI2 390 aaKnown RBP15.84■□□□□ 0.13
PTCD2-212ENST00000543322 IGSF1Q8N6C5 1336 aa15.83■□□□□ 0.12
PTCD2-212ENST00000543322 PTPRUQ92729 1446 aa15.83■□□□□ 0.12
PTCD2-212ENST00000543322 F6X3S4 739 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms