RNA–Protein interactions for RNA: ENST00000543178.5

CELF1-221, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 4

Gene CELF1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-221ENST00000543178 PPP2R1AP30153 589 aa12.82□□□□□ -0.36
CELF1-221ENST00000543178 RALBP1Q15311 655 aa12.82□□□□□ -0.36
CELF1-221ENST00000543178 ZCRB1Q8TBF4 217 aaKnown RBP12.82□□□□□ -0.36
CELF1-221ENST00000543178 FAM182BQ5T319 152 aa12.81□□□□□ -0.36
CELF1-221ENST00000543178 USHBP1Q8N6Y0 703 aa12.81□□□□□ -0.36
CELF1-221ENST00000543178 DIAPH1O60610 1272 aaKnown RBP12.8□□□□□ -0.36
CELF1-221ENST00000543178 KAT6BQ8WYB5 2073 aa12.8□□□□□ -0.36
CELF1-221ENST00000543178 NHSQ6T4R5 1651 aa12.8□□□□□ -0.36
CELF1-221ENST00000543178 SF3B2Q13435 895 aaKnown RBP12.79□□□□□ -0.36
CELF1-221ENST00000543178 RGPD3A6NKT7 1758 aaPredicted RBP12.79□□□□□ -0.36
CELF1-221ENST00000543178 RGPD4Q7Z3J3 1758 aa12.79□□□□□ -0.36
CELF1-221ENST00000543178 CFAP53Q96M91 514 aa12.78□□□□□ -0.36
CELF1-221ENST00000543178 BCL11BQ9C0K0 894 aaPredicted RBP12.78□□□□□ -0.36
CELF1-221ENST00000543178 PCDH11XQ9BZA7 1347 aa12.78□□□□□ -0.36
CELF1-221ENST00000543178 PCDH11YQ9BZA8 1340 aa12.78□□□□□ -0.36
CELF1-221ENST00000543178 TRIM37O94972 964 aa12.77□□□□□ -0.37
CELF1-221ENST00000543178 BAG6P46379 1132 aa12.77□□□□□ -0.37
CELF1-221ENST00000543178 CNGB1Q14028 1251 aaPredicted RBP12.77□□□□□ -0.37
CELF1-221ENST00000543178 SPG7Q9UQ90 795 aa12.77□□□□□ -0.37
CELF1-221ENST00000543178 NKX1-1Q15270 411 aaPredicted RBP12.76□□□□□ -0.37
CELF1-221ENST00000543178 AMOTQ4VCS5 1084 aa12.76□□□□□ -0.37
CELF1-221ENST00000543178 SULT6B1Q6IMI4 303 aa12.76□□□□□ -0.37
CELF1-221ENST00000543178 DDX54Q8TDD1 881 aaKnown RBP12.76□□□□□ -0.37
CELF1-221ENST00000543178 PLSCR1O15162 318 aa12.75□□□□□ -0.37
CELF1-221ENST00000543178 CYP27B1O15528 508 aa12.75□□□□□ -0.37
CELF1-221ENST00000543178 PLEKHO1Q53GL0 409 aaPredicted RBP12.75□□□□□ -0.37
CELF1-221ENST00000543178 AEBP1Q8IUX7 1158 aa12.75□□□□□ -0.37
CELF1-221ENST00000543178 PRKRIP1Q9H875 184 aaPredicted RBP12.75□□□□□ -0.37
CELF1-221ENST00000543178 NUDCQ9Y266 331 aa12.75□□□□□ -0.37
CELF1-221ENST00000543178 BTAF1O14981 1849 aa12.74□□□□□ -0.37
CELF1-221ENST00000543178 DOT1LQ8TEK3 1739 aa12.74□□□□□ -0.37
CELF1-221ENST00000543178 MYBBP1AQ9BQG0 1328 aaKnown RBP12.74□□□□□ -0.37
CELF1-221ENST00000543178 IFNL2Q8IZJ0 200 aa12.74□□□□□ -0.37
CELF1-221ENST00000543178 ITGB4P16144 1822 aa12.74□□□□□ -0.37
CELF1-221ENST00000543178 RREB1Q92766 1687 aa12.73□□□□□ -0.37
CELF1-221ENST00000543178 APBA3O96018 575 aa12.73□□□□□ -0.37
CELF1-221ENST00000543178 DEFB132Q7Z7B7 95 aa12.73□□□□□ -0.37
CELF1-221ENST00000543178 CAMKK2Q96RR4 588 aa12.73□□□□□ -0.37
CELF1-221ENST00000543178 TOGARAM1Q9Y4F4 1720 aa12.72□□□□□ -0.37
CELF1-221ENST00000543178 KCNQ2O43526 872 aa12.72□□□□□ -0.37
CELF1-221ENST00000543178 HSP90AB1P08238 724 aaKnown RBP12.72□□□□□ -0.37
CELF1-221ENST00000543178 PHKG2P15735 406 aa12.72□□□□□ -0.37
CELF1-221ENST00000543178 HMOX1P09601 288 aa12.71□□□□□ -0.37
CELF1-221ENST00000543178 EN1Q05925 392 aaPredicted RBP12.71□□□□□ -0.37
CELF1-221ENST00000543178 PTF1AQ7RTS3 328 aa12.71□□□□□ -0.37
CELF1-221ENST00000543178 VIRMAQ69YN4 1812 aaKnown RBP12.7□□□□□ -0.38
CELF1-221ENST00000543178 U2SURPO15042 1029 aaKnown RBP12.7□□□□□ -0.38
CELF1-221ENST00000543178 FCHSD2O94868 740 aa12.7□□□□□ -0.38
CELF1-221ENST00000543178 ACSBG1Q96GR2 724 aa12.7□□□□□ -0.38
CELF1-221ENST00000543178 SCN11AQ9UI33 1791 aa12.69□□□□□ -0.38
CELF1-221ENST00000543178 LY75O60449 1722 aa12.69□□□□□ -0.38
CELF1-221ENST00000543178 NUP188Q5SRE5 1749 aa12.69□□□□□ -0.38
CELF1-221ENST00000543178 PRIM1P49642 420 aaKnown RBP12.69□□□□□ -0.38
CELF1-221ENST00000543178 DCAF5Q96JK2 942 aa12.69□□□□□ -0.38
CELF1-221ENST00000543178 RSPH6AQ9H0K4 717 aa12.69□□□□□ -0.38
CELF1-221ENST00000543178 ADAMTS7Q9UKP4 1686 aa12.69□□□□□ -0.38
CELF1-221ENST00000543178 ERVV-2B6SEH9 535 aa12.68□□□□□ -0.38
CELF1-221ENST00000543178 EZH2Q15910 746 aaKnown RBP12.68□□□□□ -0.38
CELF1-221ENST00000543178 AKAP4Q5JQC9 854 aa12.68□□□□□ -0.38
CELF1-221ENST00000543178 ZNF530Q6P9A1 599 aaPredicted RBP12.68□□□□□ -0.38
CELF1-221ENST00000543178 U2AF1L5P0DN76 240 aaPredicted RBP12.67□□□□□ -0.38
CELF1-221ENST00000543178 U2AF1Q01081 240 aaKnown RBP eCLIP12.67□□□□□ -0.38
CELF1-221ENST00000543178 C1orf141Q5JVX7 400 aa12.67□□□□□ -0.38
CELF1-221ENST00000543178 KDM6AO15550 1401 aaPredicted RBP12.66□□□□□ -0.38
CELF1-221ENST00000543178 MTHFSDQ2M296 383 aaKnown RBP12.66□□□□□ -0.38
CELF1-221ENST00000543178 PROM2Q8N271 834 aa12.66□□□□□ -0.38
CELF1-221ENST00000543178 GAS2L2Q8NHY3 880 aa12.66□□□□□ -0.38
CELF1-221ENST00000543178 PNNQ9H307 717 aaKnown RBP12.66□□□□□ -0.38
CELF1-221ENST00000543178 HMGB2P26583 209 aaKnown RBP12.65□□□□□ -0.38
CELF1-221ENST00000543178 PRKAR2BP31323 418 aa12.65□□□□□ -0.38
CELF1-221ENST00000543178 TXNRD1Q16881 649 aa12.65□□□□□ -0.38
CELF1-221ENST00000543178 SLC27A3Q5K4L6 730 aa12.65□□□□□ -0.38
CELF1-221ENST00000543178 SYTL4Q96C24 671 aaPredicted RBP12.65□□□□□ -0.38
CELF1-221ENST00000543178 MPRIPQ6WCQ1 1025 aa12.64□□□□□ -0.39
CELF1-221ENST00000543178 PIGBQ92521 554 aa12.64□□□□□ -0.39
CELF1-221ENST00000543178 SMARCC1Q92922 1105 aaPredicted RBP12.64□□□□□ -0.39
CELF1-221ENST00000543178 PHACTR3Q96KR7 559 aa12.64□□□□□ -0.39
CELF1-221ENST00000543178 MRC1P22897 1456 aa12.64□□□□□ -0.39
CELF1-221ENST00000543178 ZNF831Q5JPB2 1677 aa12.64□□□□□ -0.39
CELF1-221ENST00000543178 ANP32CO43423 234 aa12.63□□□□□ -0.39
CELF1-221ENST00000543178 PLEKHF1Q96S99 279 aa12.63□□□□□ -0.39
CELF1-221ENST00000543178 TMOD3Q9NYL9 352 aa12.63□□□□□ -0.39
CELF1-221ENST00000543178 PAPPAQ13219 1627 aa12.62□□□□□ -0.39
CELF1-221ENST00000543178 DLG5Q8TDM6 1919 aa12.62□□□□□ -0.39
CELF1-221ENST00000543178 MAP3K5Q99683 1374 aa12.62□□□□□ -0.39
CELF1-221ENST00000543178 GNAT3A8MTJ3 354 aa12.62□□□□□ -0.39
CELF1-221ENST00000543178 RNMTO43148 476 aaKnown RBP12.62□□□□□ -0.39
CELF1-221ENST00000543178 HTATSF1O43719 755 aaKnown RBP12.62□□□□□ -0.39
CELF1-221ENST00000543178 NBPF14Q5TI25 921 aa12.62□□□□□ -0.39
CELF1-221ENST00000543178 TAF1LQ8IZX4 1826 aa12.62□□□□□ -0.39
CELF1-221ENST00000543178 SIPA1L3O60292 1781 aaPredicted RBP12.61□□□□□ -0.39
CELF1-221ENST00000543178 NEFMP07197 916 aa12.61□□□□□ -0.39
CELF1-221ENST00000543178 CABP4P57796 275 aa12.61□□□□□ -0.39
CELF1-221ENST00000543178 QSER1Q2KHR3 1735 aa12.6□□□□□ -0.39
CELF1-221ENST00000543178 CEMIPQ8WUJ3 1361 aa12.6□□□□□ -0.39
CELF1-221ENST00000543178 PALLDQ8WX93 1383 aa12.6□□□□□ -0.39
CELF1-221ENST00000543178 SLC52A2Q9HAB3 445 aa12.6□□□□□ -0.39
CELF1-221ENST00000543178 LGR6Q9HBX8 967 aa12.6□□□□□ -0.39
CELF1-221ENST00000543178 NFATC2IPQ8NCF5 419 aa12.59□□□□□ -0.39
CELF1-221ENST00000543178 IL17REQ8NFR9 667 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms