RNA–Protein interactions for RNA: ENST00000542565.1

NCOR2-223, Transcript of nuclear receptor corepressor 2, human

TSL 3

Gene NCOR2, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCOR2-223	ENST00000542565	NHS	Q6T4R5	1651 aa		27.84	■■■□□ 2.05
NCOR2-223	ENST00000542565	PER1	O15534	1290 aa	Predicted RBP	27.84	■■■□□ 2.05
NCOR2-223	ENST00000542565	TAT	P17735	454 aa	Predicted RBP	27.83	■■■□□ 2.05
NCOR2-223	ENST00000542565	KCNQ2	O43526	872 aa		27.81	■■■□□ 2.04
NCOR2-223	ENST00000542565	NUP188	Q5SRE5	1749 aa		27.81	■■■□□ 2.04
NCOR2-223	ENST00000542565	ACSBG1	Q96GR2	724 aa		27.8	■■■□□ 2.04
NCOR2-223	ENST00000542565	SHANK3	Q9BYB0	1731 aa		27.8	■■■□□ 2.04
NCOR2-223	ENST00000542565	EYA1	Q99502	592 aa		27.79	■■■□□ 2.04
NCOR2-223	ENST00000542565	EIF4A2	Q14240	407 aa	Known RBP	27.78	■■■□□ 2.04
NCOR2-223	ENST00000542565	NBPF14	Q5TI25	921 aa		27.78	■■■□□ 2.04
NCOR2-223	ENST00000542565	NPC1L1	Q9UHC9	1359 aa		27.77	■■■□□ 2.04
NCOR2-223	ENST00000542565	PSD	A5PKW4	1024 aa	Predicted RBP	27.77	■■■□□ 2.04
NCOR2-223	ENST00000542565	R3HDM1	Q15032	1099 aa	Known RBP	27.76	■■■□□ 2.03
NCOR2-223	ENST00000542565	PCDH11X	Q9BZA7	1347 aa		27.75	■■■□□ 2.03
NCOR2-223	ENST00000542565	PCDH11Y	Q9BZA8	1340 aa		27.75	■■■□□ 2.03
NCOR2-223	ENST00000542565	PROM2	Q8N271	834 aa		27.73	■■■□□ 2.03
NCOR2-223	ENST00000542565	PLEKHG2	Q9H7P9	1386 aa		27.73	■■■□□ 2.03
NCOR2-223	ENST00000542565	TXNRD1	Q16881	649 aa		27.72	■■■□□ 2.03
NCOR2-223	ENST00000542565	PKD1L3	Q7Z443	1732 aa		27.72	■■■□□ 2.03
NCOR2-223	ENST00000542565	IGSF1	Q8N6C5	1336 aa		27.71	■■■□□ 2.03
NCOR2-223	ENST00000542565	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	27.71	■■■□□ 2.03
NCOR2-223	ENST00000542565	BTAF1	O14981	1849 aa		27.7	■■■□□ 2.02
NCOR2-223	ENST00000542565	CC2D1B	Q5T0F9	858 aa	Known RBP	27.7	■■■□□ 2.02
NCOR2-223	ENST00000542565	SPG7	Q9UQ90	795 aa		27.7	■■■□□ 2.02
NCOR2-223	ENST00000542565	DOT1L	Q8TEK3	1739 aa		27.7	■■■□□ 2.02
NCOR2-223	ENST00000542565	PRIM1	P49642	420 aa	Known RBP	27.69	■■■□□ 2.02
NCOR2-223	ENST00000542565	CYP27B1	O15528	508 aa		27.67	■■■□□ 2.02
NCOR2-223	ENST00000542565	SYTL4	Q96C24	671 aa	Predicted RBP	27.66	■■■□□ 2.02
NCOR2-223	ENST00000542565	MTHFS	P49914	203 aa		27.65	■■■□□ 2.02
NCOR2-223	ENST00000542565	LRP5	O75197	1615 aa		27.64	■■■□□ 2.02
NCOR2-223	ENST00000542565	IL13	P35225	146 aa		27.63	■■■□□ 2.01
NCOR2-223	ENST00000542565	NKX1-1	Q15270	411 aa	Predicted RBP	27.63	■■■□□ 2.01
NCOR2-223	ENST00000542565	ANO8	Q9HCE9	1232 aa	Predicted RBP	27.62	■■■□□ 2.01
NCOR2-223	ENST00000542565	SLC27A3	Q5K4L6	730 aa		27.6	■■■□□ 2.01
NCOR2-223	ENST00000542565	IFNL2	Q8IZJ0	200 aa		27.59	■■■□□ 2.01
NCOR2-223	ENST00000542565	STK32B	Q9NY57	414 aa		27.59	■■■□□ 2.01
NCOR2-223	ENST00000542565	KAT6B	Q8WYB5	2073 aa		27.59	■■■□□ 2.01
NCOR2-223	ENST00000542565	KDR	P35968	1356 aa		27.59	■■■□□ 2.01
NCOR2-223	ENST00000542565	PHKG2	P15735	406 aa		27.58	■■■□□ 2.01
NCOR2-223	ENST00000542565	SLC15A2	Q16348	729 aa		27.57	■■■□□ 2
NCOR2-223	ENST00000542565	PAPPA	Q13219	1627 aa		27.56	■■■□□ 2
NCOR2-223	ENST00000542565	AMOT	Q4VCS5	1084 aa		27.56	■■■□□ 2
NCOR2-223	ENST00000542565	PLEKHO1	Q53GL0	409 aa	Predicted RBP	27.56	■■■□□ 2
NCOR2-223	ENST00000542565	SULT6B1	Q6IMI4	303 aa		27.56	■■■□□ 2
NCOR2-223	ENST00000542565	TOGARAM1	Q9Y4F4	1720 aa		27.55	■■■□□ 2
NCOR2-223	ENST00000542565	AEBP1	Q8IUX7	1158 aa		27.55	■■■□□ 2
NCOR2-223	ENST00000542565	LRRC4B	Q9NT99	713 aa		27.55	■■■□□ 2
NCOR2-223	ENST00000542565	LY75	O60449	1722 aa		27.54	■■■□□ 2
NCOR2-223	ENST00000542565	DIAPH1	O60610	1272 aa	Known RBP	27.54	■■■□□ 2
NCOR2-223	ENST00000542565	CNGB1	Q14028	1251 aa	Predicted RBP	27.54	■■■□□ 2
NCOR2-223	ENST00000542565	MPRIP	Q6WCQ1	1025 aa		27.53	■■■□□ 2
NCOR2-223	ENST00000542565	HSP90AB1	P08238	724 aa	Known RBP	27.51	■■□□□ 1.99
NCOR2-223	ENST00000542565	CASZ1	Q86V15	1759 aa		27.5	■■□□□ 1.99
NCOR2-223	ENST00000542565	COL3A1	P02461	1466 aa	Predicted RBP	27.5	■■□□□ 1.99
NCOR2-223	ENST00000542565	HMGB2	P26583	209 aa	Known RBP	27.49	■■□□□ 1.99
NCOR2-223	ENST00000542565	SMARCC1	Q92922	1105 aa	Predicted RBP	27.49	■■□□□ 1.99
NCOR2-223	ENST00000542565	CCNL1	Q9UK58	526 aa	Predicted RBP	27.49	■■□□□ 1.99
NCOR2-223	ENST00000542565	ITGB4	P16144	1822 aa		27.48	■■□□□ 1.99
NCOR2-223	ENST00000542565	ZNF530	Q6P9A1	599 aa	Predicted RBP	27.48	■■□□□ 1.99
NCOR2-223	ENST00000542565	PIGB	Q92521	554 aa		27.48	■■□□□ 1.99
NCOR2-223	ENST00000542565	PALLD	Q8WX93	1383 aa		27.48	■■□□□ 1.99
NCOR2-223	ENST00000542565	AKT1S1	Q96B36	256 aa		27.47	■■□□□ 1.99
NCOR2-223	ENST00000542565	DCAF5	Q96JK2	942 aa		27.47	■■□□□ 1.99
NCOR2-223	ENST00000542565	SPON1	Q9HCB6	807 aa		27.47	■■□□□ 1.99
NCOR2-223	ENST00000542565	TMOD3	Q9NYL9	352 aa		27.47	■■□□□ 1.99
NCOR2-223	ENST00000542565	ZNF827	Q17R98	1081 aa		27.46	■■□□□ 1.99
NCOR2-223	ENST00000542565	ERVV-2	B6SEH9	535 aa		27.45	■■□□□ 1.98
NCOR2-223	ENST00000542565	C1orf141	Q5JVX7	400 aa		27.45	■■□□□ 1.98
NCOR2-223	ENST00000542565	CFAP53	Q96M91	514 aa		27.45	■■□□□ 1.98
NCOR2-223	ENST00000542565	SRCAP	Q6ZRS2	3230 aa		27.45	■■□□□ 1.98
NCOR2-223	ENST00000542565	PPP2R1A	P30153	589 aa		27.44	■■□□□ 1.98
NCOR2-223	ENST00000542565	PDGFD	Q9GZP0	370 aa	Predicted RBP	27.44	■■□□□ 1.98
NCOR2-223	ENST00000542565	HMOX1	P09601	288 aa		27.43	■■□□□ 1.98
NCOR2-223	ENST00000542565	KCNQ4	P56696	695 aa		27.43	■■□□□ 1.98
NCOR2-223	ENST00000542565	KDM6A	O15550	1401 aa	Predicted RBP	27.41	■■□□□ 1.98
NCOR2-223	ENST00000542565	ZEB1	P37275	1124 aa	Predicted RBP	27.41	■■□□□ 1.98
NCOR2-223	ENST00000542565	QSER1	Q2KHR3	1735 aa		27.4	■■□□□ 1.98
NCOR2-223	ENST00000542565	U2SURP	O15042	1029 aa	Known RBP	27.39	■■□□□ 1.98
NCOR2-223	ENST00000542565	AKAP4	Q5JQC9	854 aa		27.39	■■□□□ 1.98
NCOR2-223	ENST00000542565	MTFR1L	Q9H019	292 aa		27.38	■■□□□ 1.97
NCOR2-223	ENST00000542565	TFCP2L1	Q9NZI6	479 aa		27.38	■■□□□ 1.97
NCOR2-223	ENST00000542565	ZBTB7A	O95365	584 aa		27.37	■■□□□ 1.97
NCOR2-223	ENST00000542565	C5	P01031	1676 aa		27.36	■■□□□ 1.97
NCOR2-223	ENST00000542565	CABP4	P57796	275 aa		27.36	■■□□□ 1.97
NCOR2-223	ENST00000542565	ATG3	Q9NT62	314 aa		27.36	■■□□□ 1.97
NCOR2-223	ENST00000542565	ASAP1	Q9ULH1	1129 aa		27.36	■■□□□ 1.97
NCOR2-223	ENST00000542565	NUDC	Q9Y266	331 aa		27.36	■■□□□ 1.97
NCOR2-223	ENST00000542565	LOC102724428	A0A0B4J2F2	783 aa		27.35	■■□□□ 1.97
NCOR2-223	ENST00000542565	SIK1	P57059	783 aa		27.35	■■□□□ 1.97
NCOR2-223	ENST00000542565	PNPLA7	Q6ZV29	1317 aa		27.35	■■□□□ 1.97
NCOR2-223	ENST00000542565	SLC16A10	Q8TF71	515 aa		27.34	■■□□□ 1.97
NCOR2-223	ENST00000542565	MTHFSD	Q2M296	383 aa	Known RBP	27.33	■■□□□ 1.97
NCOR2-223	ENST00000542565	PPP1R1B	Q9UD71	204 aa	Predicted RBP	27.33	■■□□□ 1.97
NCOR2-223	ENST00000542565	ATF5	Q9Y2D1	282 aa	Predicted RBP	27.32	■■□□□ 1.96
NCOR2-223	ENST00000542565	PTGER2	P43116	358 aa		27.31	■■□□□ 1.96
NCOR2-223	ENST00000542565	TAF1L	Q8IZX4	1826 aa		27.31	■■□□□ 1.96
NCOR2-223	ENST00000542565	DDX10	Q13206	875 aa	Known RBP	27.3	■■□□□ 1.96
NCOR2-223	ENST00000542565	SCN11A	Q9UI33	1791 aa		27.3	■■□□□ 1.96
NCOR2-223	ENST00000542565	TUBGCP6	Q96RT7	1819 aa		27.3	■■□□□ 1.96
NCOR2-223	ENST00000542565	NFATC2IP	Q8NCF5	419 aa		27.29	■■□□□ 1.96

Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms