RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 U2SURPO15042 1029 aaKnown RBP6.59□□□□□ -1.35
ATPAF1-212ENST00000542495 FRAT2O75474 233 aaPredicted RBP6.59□□□□□ -1.35
ATPAF1-212ENST00000542495 FCHSD2O94868 740 aa6.59□□□□□ -1.35
ATPAF1-212ENST00000542495 BECN1Q14457 450 aa6.59□□□□□ -1.35
ATPAF1-212ENST00000542495 ALDH1L2Q3SY69 923 aa6.59□□□□□ -1.35
ATPAF1-212ENST00000542495 ATF7IPQ6VMQ6 1270 aa6.59□□□□□ -1.35
ATPAF1-212ENST00000542495 MAMSTRQ6ZN01 415 aa6.59□□□□□ -1.35
ATPAF1-212ENST00000542495 HDGFL2Q7Z4V5 671 aaPredicted RBP6.59□□□□□ -1.35
ATPAF1-212ENST00000542495 SMC5Q8IY18 1101 aa6.59□□□□□ -1.35
ATPAF1-212ENST00000542495 FBXO22Q8NEZ5 403 aa6.59□□□□□ -1.35
ATPAF1-212ENST00000542495 ESF1Q9H501 851 aaKnown RBP6.59□□□□□ -1.35
ATPAF1-212ENST00000542495 SMC4Q9NTJ3 1288 aa6.59□□□□□ -1.35
ATPAF1-212ENST00000542495 POGKQ9P215 609 aa6.59□□□□□ -1.35
ATPAF1-212ENST00000542495 DDX19BQ9UMR2 479 aa6.59□□□□□ -1.35
ATPAF1-212ENST00000542495 CPSF1Q10570 1443 aaKnown RBP6.59□□□□□ -1.35
ATPAF1-212ENST00000542495 ZMYND10O75800 440 aa6.59□□□□□ -1.35
ATPAF1-212ENST00000542495 RIPK4P57078 832 aa6.59□□□□□ -1.35
ATPAF1-212ENST00000542495 FBXO31Q5XUX0 539 aaPredicted RBP6.59□□□□□ -1.35
ATPAF1-212ENST00000542495 FTSJ3Q8IY81 847 aaKnown RBP6.59□□□□□ -1.35
ATPAF1-212ENST00000542495 ZNF428Q96B54 188 aa6.59□□□□□ -1.35
ATPAF1-212ENST00000542495 RSPH6AQ9H0K4 717 aa6.59□□□□□ -1.35
ATPAF1-212ENST00000542495 ZBTB40Q9NUA8 1239 aa6.59□□□□□ -1.35
ATPAF1-212ENST00000542495 PIK3R4Q99570 1358 aa6.58□□□□□ -1.36
ATPAF1-212ENST00000542495 KIF16BQ96L93 1317 aa6.58□□□□□ -1.36
ATPAF1-212ENST00000542495 ATMINO43313 823 aaPredicted RBP6.58□□□□□ -1.36
ATPAF1-212ENST00000542495 CABP1Q9NZU7 370 aa6.58□□□□□ -1.36
ATPAF1-212ENST00000542495 POLKQ9UBT6 870 aa6.58□□□□□ -1.36
ATPAF1-212ENST00000542495 NOB1Q9ULX3 412 aaKnown RBP6.58□□□□□ -1.36
ATPAF1-212ENST00000542495 NRXN3Q9Y4C0 1643 aa6.58□□□□□ -1.36
ATPAF1-212ENST00000542495 IPO8O15397 1037 aaKnown RBP6.57□□□□□ -1.36
ATPAF1-212ENST00000542495 C7P10643 843 aa6.57□□□□□ -1.36
ATPAF1-212ENST00000542495 TMEM57Q8N5G2 664 aa6.57□□□□□ -1.36
ATPAF1-212ENST00000542495 IL27Q8NEV9 243 aa6.57□□□□□ -1.36
ATPAF1-212ENST00000542495 SLC39A7Q92504 469 aa6.57□□□□□ -1.36
ATPAF1-212ENST00000542495 TBC1D2Q9BYX2 928 aa6.57□□□□□ -1.36
ATPAF1-212ENST00000542495 UPF2Q9HAU5 1272 aaKnown RBP6.57□□□□□ -1.36
ATPAF1-212ENST00000542495 CCDC61Q9Y6R9 512 aa6.57□□□□□ -1.36
ATPAF1-212ENST00000542495 CDK12Q9NYV4 1490 aaPredicted RBP6.57□□□□□ -1.36
ATPAF1-212ENST00000542495 EDC4Q6P2E9 1401 aaKnown RBP6.57□□□□□ -1.36
ATPAF1-212ENST00000542495 RIMS2Q9UQ26 1411 aa6.57□□□□□ -1.36
ATPAF1-212ENST00000542495 STRCQ7RTU9 1775 aa6.57□□□□□ -1.36
ATPAF1-212ENST00000542495 AATKQ6ZMQ8 1374 aa6.57□□□□□ -1.36
ATPAF1-212ENST00000542495 C3P01024 1663 aa6.57□□□□□ -1.36
ATPAF1-212ENST00000542495 KNDC1Q76NI1 1749 aa6.56□□□□□ -1.36
ATPAF1-212ENST00000542495 PTCH1Q13635 1447 aa6.56□□□□□ -1.36
ATPAF1-212ENST00000542495 NCKAP5LQ9HCH0 1330 aa6.56□□□□□ -1.36
ATPAF1-212ENST00000542495 MAP2P11137 1827 aaKnown RBP6.56□□□□□ -1.36
ATPAF1-212ENST00000542495 ZNF853P0CG23 659 aa6.56□□□□□ -1.36
ATPAF1-212ENST00000542495 NUCB1Q02818 461 aa6.56□□□□□ -1.36
ATPAF1-212ENST00000542495 NFE2L2Q16236 605 aa6.56□□□□□ -1.36
ATPAF1-212ENST00000542495 ITPRIPQ8IWB1 547 aa6.56□□□□□ -1.36
ATPAF1-212ENST00000542495 ARHGAP45Q92619 1136 aa6.56□□□□□ -1.36
ATPAF1-212ENST00000542495 SIRT1Q96EB6 747 aa6.56□□□□□ -1.36
ATPAF1-212ENST00000542495 MON2Q7Z3U7 1717 aa6.56□□□□□ -1.36
ATPAF1-212ENST00000542495 TECPR2O15040 1411 aa6.56□□□□□ -1.36
ATPAF1-212ENST00000542495 VAMP4O75379 141 aa6.55□□□□□ -1.36
ATPAF1-212ENST00000542495 PRKAR2BP31323 418 aa6.55□□□□□ -1.36
ATPAF1-212ENST00000542495 IL13P35225 146 aa6.55□□□□□ -1.36
ATPAF1-212ENST00000542495 NLRP6P59044 892 aa6.55□□□□□ -1.36
ATPAF1-212ENST00000542495 CALD1Q05682 793 aaKnown RBP6.55□□□□□ -1.36
ATPAF1-212ENST00000542495 MRPL50Q8N5N7 158 aaKnown RBP6.55□□□□□ -1.36
ATPAF1-212ENST00000542495 EFCAB3Q8N7B9 438 aa6.55□□□□□ -1.36
ATPAF1-212ENST00000542495 PHF8Q9UPP1 1060 aa6.55□□□□□ -1.36
ATPAF1-212ENST00000542495 AKAP12Q02952 1782 aa6.55□□□□□ -1.36
ATPAF1-212ENST00000542495 POTEFA5A3E0 1075 aa6.54□□□□□ -1.36
ATPAF1-212ENST00000542495 ZBTB7BO15156 539 aaPredicted RBP6.54□□□□□ -1.36
ATPAF1-212ENST00000542495 WAPLQ7Z5K2 1190 aa6.54□□□□□ -1.36
ATPAF1-212ENST00000542495 PHACTR3Q96KR7 559 aa6.54□□□□□ -1.36
ATPAF1-212ENST00000542495 C22orf23Q9BZE7 217 aa6.54□□□□□ -1.36
ATPAF1-212ENST00000542495 IFT57Q9NWB7 429 aa6.54□□□□□ -1.36
ATPAF1-212ENST00000542495 NCOA3Q9Y6Q9 1424 aa6.54□□□□□ -1.36
ATPAF1-212ENST00000542495 NRKQ7Z2Y5 1582 aa6.54□□□□□ -1.36
ATPAF1-212ENST00000542495 CPS1P31327 1500 aa6.54□□□□□ -1.36
ATPAF1-212ENST00000542495 WASLO00401 505 aaPredicted RBP6.54□□□□□ -1.36
ATPAF1-212ENST00000542495 RBM25P49756 843 aaKnown RBP6.54□□□□□ -1.36
ATPAF1-212ENST00000542495 MMRN1Q13201 1228 aa6.54□□□□□ -1.36
ATPAF1-212ENST00000542495 CHMP4BQ9H444 224 aaKnown RBP6.54□□□□□ -1.36
ATPAF1-212ENST00000542495 SCUBE2Q9NQ36 999 aa6.54□□□□□ -1.36
ATPAF1-212ENST00000542495 BRPF3Q9ULD4 1205 aa6.54□□□□□ -1.36
ATPAF1-212ENST00000542495 KIF24Q5T7B8 1368 aa6.53□□□□□ -1.36
ATPAF1-212ENST00000542495 ABCC4O15439 1325 aa6.53□□□□□ -1.36
ATPAF1-212ENST00000542495 SOX12O15370 315 aa6.53□□□□□ -1.36
ATPAF1-212ENST00000542495 FBLN1P23142 703 aa6.53□□□□□ -1.36
ATPAF1-212ENST00000542495 GNAI1P63096 354 aa6.53□□□□□ -1.36
ATPAF1-212ENST00000542495 BARGINQ6ZT62 677 aa6.53□□□□□ -1.36
ATPAF1-212ENST00000542495 CHD1LQ86WJ1 897 aa6.53□□□□□ -1.36
ATPAF1-212ENST00000542495 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.53□□□□□ -1.36
ATPAF1-212ENST00000542495 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.53□□□□□ -1.36
ATPAF1-212ENST00000542495 MS4A3Q96HJ5 214 aa6.53□□□□□ -1.36
ATPAF1-212ENST00000542495 SLKQ9H2G2 1235 aaPredicted RBP6.53□□□□□ -1.36
ATPAF1-212ENST00000542495 ARIH1Q9Y4X5 557 aaPredicted RBP6.53□□□□□ -1.36
ATPAF1-212ENST00000542495 METP08581 1390 aa6.53□□□□□ -1.36
ATPAF1-212ENST00000542495 DLG5Q8TDM6 1919 aa6.53□□□□□ -1.36
ATPAF1-212ENST00000542495 DDIT3P35638 169 aa6.52□□□□□ -1.37
ATPAF1-212ENST00000542495 MFSD10Q14728 455 aa6.52□□□□□ -1.37
ATPAF1-212ENST00000542495 BMP2KLQ5H9B9 411 aa6.52□□□□□ -1.37
ATPAF1-212ENST00000542495 SMYD5Q6GMV2 418 aa6.52□□□□□ -1.37
ATPAF1-212ENST00000542495 IFNL1Q8IU54 200 aa6.52□□□□□ -1.37
ATPAF1-212ENST00000542495 SNX21Q969T3 373 aa6.52□□□□□ -1.37
ATPAF1-212ENST00000542495 GCC1Q96CN9 775 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms