RNA–Protein interactions for RNA: ENST00000542293.5

PAAF1-211, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-211ENST00000542293 PRIM1P49642 420 aaKnown RBP22.79■■□□□ 1.24
PAAF1-211ENST00000542293 ANKRD24Q8TF21 1146 aa22.78■■□□□ 1.24
PAAF1-211ENST00000542293 WDR90Q96KV7 1748 aa22.78■■□□□ 1.24
PAAF1-211ENST00000542293 CCNL1Q9UK58 526 aaPredicted RBP22.78■■□□□ 1.24
PAAF1-211ENST00000542293 WWC3Q9ULE0 1092 aa22.78■■□□□ 1.24
PAAF1-211ENST00000542293 ANKRD36BQ8N2N9 1353 aa22.77■■□□□ 1.24
PAAF1-211ENST00000542293 IGSF1Q8N6C5 1336 aa22.76■■□□□ 1.23
PAAF1-211ENST00000542293 USP54Q70EL1 1684 aa22.75■■□□□ 1.23
PAAF1-211ENST00000542293 TOMM70O94826 608 aa22.75■■□□□ 1.23
PAAF1-211ENST00000542293 PRELPP51888 382 aa22.73■■□□□ 1.23
PAAF1-211ENST00000542293 C5P01031 1676 aa22.73■■□□□ 1.23
PAAF1-211ENST00000542293 MON2Q7Z3U7 1717 aa22.73■■□□□ 1.23
PAAF1-211ENST00000542293 USP31Q70CQ4 1352 aa22.73■■□□□ 1.23
PAAF1-211ENST00000542293 CICQ96RK0 1608 aaPredicted RBP22.72■■□□□ 1.23
PAAF1-211ENST00000542293 EVC2Q86UK5 1308 aa22.72■■□□□ 1.23
PAAF1-211ENST00000542293 KTN1Q86UP2 1357 aaKnown RBP22.72■■□□□ 1.23
PAAF1-211ENST00000542293 TNS4Q8IZW8 715 aa22.71■■□□□ 1.23
PAAF1-211ENST00000542293 HTRA3P83110 453 aa22.7■■□□□ 1.22
PAAF1-211ENST00000542293 JMYQ8N9B5 988 aa22.7■■□□□ 1.22
PAAF1-211ENST00000542293 KLRG1Q96E93 195 aa22.7■■□□□ 1.22
PAAF1-211ENST00000542293 TAF1LQ8IZX4 1826 aa22.69■■□□□ 1.22
PAAF1-211ENST00000542293 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.68■■□□□ 1.22
PAAF1-211ENST00000542293 USP47Q96K76 1375 aa22.67■■□□□ 1.22
PAAF1-211ENST00000542293 NME9Q86XW9 330 aa22.67■■□□□ 1.22
PAAF1-211ENST00000542293 FAM208AQ9UK61 1670 aaKnown RBP22.66■■□□□ 1.22
PAAF1-211ENST00000542293 NMRK2Q9NPI5 230 aa22.66■■□□□ 1.22
PAAF1-211ENST00000542293 TOGARAM1Q9Y4F4 1720 aa22.65■■□□□ 1.22
PAAF1-211ENST00000542293 FLAD1Q8NFF5 587 aa22.65■■□□□ 1.22
PAAF1-211ENST00000542293 AMIGO3Q86WK7 504 aa22.64■■□□□ 1.21
PAAF1-211ENST00000542293 RGPD2P0DJD1 1756 aa22.63■■□□□ 1.21
PAAF1-211ENST00000542293 PCNTO95613 3336 aa22.62■■□□□ 1.21
PAAF1-211ENST00000542293 LTV1Q96GA3 475 aaPredicted RBP22.62■■□□□ 1.21
PAAF1-211ENST00000542293 C4BP0C0L5 1744 aa22.61■■□□□ 1.21
PAAF1-211ENST00000542293 UBR3Q6ZT12 1888 aa22.61■■□□□ 1.21
PAAF1-211ENST00000542293 ZCRB1Q8TBF4 217 aaKnown RBP22.61■■□□□ 1.21
PAAF1-211ENST00000542293 RBM46Q8TBY0 533 aaKnown RBP22.61■■□□□ 1.21
PAAF1-211ENST00000542293 MEGF6O75095 1541 aa22.61■■□□□ 1.21
PAAF1-211ENST00000542293 SBNO2Q9Y2G9 1366 aa22.61■■□□□ 1.21
PAAF1-211ENST00000542293 SMIM5Q71RC9 77 aa22.6■■□□□ 1.21
PAAF1-211ENST00000542293 IP6K1Q92551 441 aa22.6■■□□□ 1.21
PAAF1-211ENST00000542293 KIAA1551Q9HCM1 1747 aa22.59■■□□□ 1.21
PAAF1-211ENST00000542293 CD163L1Q9NR16 1453 aa22.59■■□□□ 1.21
PAAF1-211ENST00000542293 N4BP2Q86UW6 1770 aaPredicted RBP22.56■■□□□ 1.2
PAAF1-211ENST00000542293 PXDNLA1KZ92 1463 aa22.55■■□□□ 1.2
PAAF1-211ENST00000542293 KIF13BQ9NQT8 1826 aa22.55■■□□□ 1.2
PAAF1-211ENST00000542293 PALLDQ8WX93 1383 aa22.55■■□□□ 1.2
PAAF1-211ENST00000542293 PHF14O94880 888 aa22.54■■□□□ 1.2
PAAF1-211ENST00000542293 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.53■■□□□ 1.2
PAAF1-211ENST00000542293 FSTL1Q12841 308 aa22.53■■□□□ 1.2
PAAF1-211ENST00000542293 AK7Q96M32 723 aa22.53■■□□□ 1.2
PAAF1-211ENST00000542293 SLC34A2O95436 690 aa22.51■■□□□ 1.19
PAAF1-211ENST00000542293 BCS1LQ9Y276 419 aa22.51■■□□□ 1.19
PAAF1-211ENST00000542293 HMGB2P26583 209 aaKnown RBP22.5■■□□□ 1.19
PAAF1-211ENST00000542293 ARHGAP27Q6ZUM4 889 aa22.5■■□□□ 1.19
PAAF1-211ENST00000542293 C16orf71Q8IYS4 520 aaPredicted RBP22.5■■□□□ 1.19
PAAF1-211ENST00000542293 EDC4Q6P2E9 1401 aaKnown RBP22.48■■□□□ 1.19
PAAF1-211ENST00000542293 ITGB4P16144 1822 aa22.48■■□□□ 1.19
PAAF1-211ENST00000542293 HOXC9P31274 260 aa22.48■■□□□ 1.19
PAAF1-211ENST00000542293 PKD1L3Q7Z443 1732 aa22.47■■□□□ 1.19
PAAF1-211ENST00000542293 BRCA1P38398 1863 aaKnown RBP22.47■■□□□ 1.19
PAAF1-211ENST00000542293 NSD3Q9BZ95 1437 aa22.47■■□□□ 1.19
PAAF1-211ENST00000542293 KCPQ6ZWJ8 1503 aa22.47■■□□□ 1.19
PAAF1-211ENST00000542293 A0A0G2JLW4 131 aa22.46■■□□□ 1.19
PAAF1-211ENST00000542293 HSPA1AP0DMV8 641 aaKnown RBP22.46■■□□□ 1.19
PAAF1-211ENST00000542293 HSPA1BP0DMV9 641 aaKnown RBP22.46■■□□□ 1.19
PAAF1-211ENST00000542293 SSFA2P28290 1259 aa22.46■■□□□ 1.19
PAAF1-211ENST00000542293 MPRIPQ6WCQ1 1025 aa22.46■■□□□ 1.19
PAAF1-211ENST00000542293 MAP3K19Q56UN5 1328 aa22.46■■□□□ 1.19
PAAF1-211ENST00000542293 MAP2P11137 1827 aaKnown RBP22.45■■□□□ 1.19
PAAF1-211ENST00000542293 C9orf131Q5VYM1 1079 aa22.45■■□□□ 1.18
PAAF1-211ENST00000542293 MMP10P09238 476 aa22.44■■□□□ 1.18
PAAF1-211ENST00000542293 FBLN1P23142 703 aa22.44■■□□□ 1.18
PAAF1-211ENST00000542293 TGFB2P61812 414 aa22.44■■□□□ 1.18
PAAF1-211ENST00000542293 NBPF6Q5VWK0 638 aa22.44■■□□□ 1.18
PAAF1-211ENST00000542293 USHBP1Q8N6Y0 703 aa22.44■■□□□ 1.18
PAAF1-211ENST00000542293 NBPF4Q96M43 638 aa22.44■■□□□ 1.18
PAAF1-211ENST00000542293 SLC12A5Q9H2X9 1139 aa22.44■■□□□ 1.18
PAAF1-211ENST00000542293 PLEKHG2Q9H7P9 1386 aa22.43■■□□□ 1.18
PAAF1-211ENST00000542293 HDGFL2Q7Z4V5 671 aaPredicted RBP22.43■■□□□ 1.18
PAAF1-211ENST00000542293 LINC00116Q8NCU8 138 aa22.43■■□□□ 1.18
PAAF1-211ENST00000542293 TMC1Q8TDI8 760 aa22.43■■□□□ 1.18
PAAF1-211ENST00000542293 C10orf71Q711Q0 1435 aa22.42■■□□□ 1.18
PAAF1-211ENST00000542293 CGNL1Q0VF96 1302 aa22.42■■□□□ 1.18
PAAF1-211ENST00000542293 SMARCC1Q92922 1105 aaPredicted RBP22.42■■□□□ 1.18
PAAF1-211ENST00000542293 A0A1W2PP64 1363 aa22.41■■□□□ 1.18
PAAF1-211ENST00000542293 ARFGEF1Q9Y6D6 1849 aa22.41■■□□□ 1.18
PAAF1-211ENST00000542293 FCHSD2O94868 740 aa22.41■■□□□ 1.18
PAAF1-211ENST00000542293 AMPHP49418 695 aa22.41■■□□□ 1.18
PAAF1-211ENST00000542293 RRAGCQ9HB90 399 aa22.41■■□□□ 1.18
PAAF1-211ENST00000542293 TNRC6CQ9HCJ0 1690 aaKnown RBP22.41■■□□□ 1.18
PAAF1-211ENST00000542293 DPEP1P16444 411 aa22.4■■□□□ 1.18
PAAF1-211ENST00000542293 ROCK2O75116 1388 aaKnown RBP22.39■■□□□ 1.18
PAAF1-211ENST00000542293 KDM2BQ8NHM5 1336 aa22.39■■□□□ 1.18
PAAF1-211ENST00000542293 PCDH11XQ9BZA7 1347 aa22.39■■□□□ 1.18
PAAF1-211ENST00000542293 PCDH11YQ9BZA8 1340 aa22.39■■□□□ 1.18
PAAF1-211ENST00000542293 RAPGEF4Q8WZA2 1011 aa22.39■■□□□ 1.17
PAAF1-211ENST00000542293 L3MBTL2Q969R5 705 aa22.39■■□□□ 1.17
PAAF1-211ENST00000542293 GNPATO15228 680 aa22.37■■□□□ 1.17
PAAF1-211ENST00000542293 CYP27B1O15528 508 aa22.37■■□□□ 1.17
PAAF1-211ENST00000542293 TATP17735 454 aaPredicted RBP22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms