RNA–Protein interactions for RNA: ENST00000542155.5

GTDC1-219, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GTDC1, Length 2,677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-219ENST00000542155 RAPGEF4Q8WZA2 1011 aa22.56■■□□□ 1.2
GTDC1-219ENST00000542155 SLIT2O94813 1529 aa22.56■■□□□ 1.2
GTDC1-219ENST00000542155 NRAPQ86VF7 1730 aa22.56■■□□□ 1.2
GTDC1-219ENST00000542155 CRB1P82279 1406 aa22.56■■□□□ 1.2
GTDC1-219ENST00000542155 PLEKHO1Q53GL0 409 aaPredicted RBP22.54■■□□□ 1.2
GTDC1-219ENST00000542155 NGLY1Q96IV0 654 aa22.54■■□□□ 1.2
GTDC1-219ENST00000542155 E9PSI1 815 aa22.53■■□□□ 1.2
GTDC1-219ENST00000542155 TATP17735 454 aaPredicted RBP22.53■■□□□ 1.2
GTDC1-219ENST00000542155 ZNF530Q6P9A1 599 aaPredicted RBP22.53■■□□□ 1.2
GTDC1-219ENST00000542155 IL17REQ8NFR9 667 aa22.53■■□□□ 1.2
GTDC1-219ENST00000542155 GNAT3A8MTJ3 354 aa22.52■■□□□ 1.2
GTDC1-219ENST00000542155 TSR2Q969E8 191 aaKnown RBP22.52■■□□□ 1.2
GTDC1-219ENST00000542155 BCL9LQ86UU0 1499 aa22.52■■□□□ 1.2
GTDC1-219ENST00000542155 AMOTQ4VCS5 1084 aa22.52■■□□□ 1.2
GTDC1-219ENST00000542155 NWD2Q9ULI1 1742 aa22.51■■□□□ 1.19
GTDC1-219ENST00000542155 LGR6Q9HBX8 967 aa22.51■■□□□ 1.19
GTDC1-219ENST00000542155 MAP3K5Q99683 1374 aa22.51■■□□□ 1.19
GTDC1-219ENST00000542155 LMOD3Q0VAK6 560 aa22.5■■□□□ 1.19
GTDC1-219ENST00000542155 FNBP4Q8N3X1 1017 aaPredicted RBP22.5■■□□□ 1.19
GTDC1-219ENST00000542155 LAS1LQ9Y4W2 734 aaKnown RBP22.5■■□□□ 1.19
GTDC1-219ENST00000542155 IL2RBP14784 551 aa22.49■■□□□ 1.19
GTDC1-219ENST00000542155 OVOS2A0A0G2JMS6 1433 aa22.49■■□□□ 1.19
GTDC1-219ENST00000542155 CYP27B1O15528 508 aa22.48■■□□□ 1.19
GTDC1-219ENST00000542155 MPRIPQ6WCQ1 1025 aa22.48■■□□□ 1.19
GTDC1-219ENST00000542155 UNC5CLQ8IV45 518 aa22.48■■□□□ 1.19
GTDC1-219ENST00000542155 IL16Q14005 1332 aa22.48■■□□□ 1.19
GTDC1-219ENST00000542155 AKAP4Q5JQC9 854 aa22.48■■□□□ 1.19
GTDC1-219ENST00000542155 RTF1Q92541 710 aaKnown RBP22.48■■□□□ 1.19
GTDC1-219ENST00000542155 SPATA31A1Q5TZJ5 1347 aa22.47■■□□□ 1.19
GTDC1-219ENST00000542155 FANCIQ9NVI1 1328 aa22.47■■□□□ 1.19
GTDC1-219ENST00000542155 ZNF853P0CG23 659 aa22.47■■□□□ 1.19
GTDC1-219ENST00000542155 PKD1L3Q7Z443 1732 aa22.47■■□□□ 1.19
GTDC1-219ENST00000542155 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.46■■□□□ 1.19
GTDC1-219ENST00000542155 HTATSF1O43719 755 aaKnown RBP22.46■■□□□ 1.19
GTDC1-219ENST00000542155 MEX3CQ5U5Q3 659 aaKnown RBP22.46■■□□□ 1.19
GTDC1-219ENST00000542155 MIS18AQ9NYP9 233 aa22.46■■□□□ 1.19
GTDC1-219ENST00000542155 SPATA31A5Q5VU36 1347 aa22.46■■□□□ 1.19
GTDC1-219ENST00000542155 SPATA31A7Q8IWB4 1347 aa22.46■■□□□ 1.19
GTDC1-219ENST00000542155 PARP4Q9UKK3 1724 aaKnown RBP22.46■■□□□ 1.19
GTDC1-219ENST00000542155 SPG7Q9UQ90 795 aa22.45■■□□□ 1.19
GTDC1-219ENST00000542155 SUPT16HQ9Y5B9 1047 aaKnown RBP22.45■■□□□ 1.19
GTDC1-219ENST00000542155 PHKG2P15735 406 aa22.45■■□□□ 1.18
GTDC1-219ENST00000542155 DISP2A7MBM2 1401 aa22.45■■□□□ 1.18
GTDC1-219ENST00000542155 C1orf141Q5JVX7 400 aa22.44■■□□□ 1.18
GTDC1-219ENST00000542155 ZCRB1Q8TBF4 217 aaKnown RBP22.44■■□□□ 1.18
GTDC1-219ENST00000542155 MBIPQ9NS73 344 aa22.44■■□□□ 1.18
GTDC1-219ENST00000542155 USP21Q9UK80 565 aa22.44■■□□□ 1.18
GTDC1-219ENST00000542155 VIRMAQ69YN4 1812 aaKnown RBP22.44■■□□□ 1.18
GTDC1-219ENST00000542155 CFAP44Q96MT7 982 aa22.44■■□□□ 1.18
GTDC1-219ENST00000542155 SHANK3Q9BYB0 1731 aa22.44■■□□□ 1.18
GTDC1-219ENST00000542155 MYH16Q9H6N6 1097 aa22.44■■□□□ 1.18
GTDC1-219ENST00000542155 IFT57Q9NWB7 429 aa22.44■■□□□ 1.18
GTDC1-219ENST00000542155 CCDC9Q9Y3X0 531 aaKnown RBP22.44■■□□□ 1.18
GTDC1-219ENST00000542155 CEMIPQ8WUJ3 1361 aa22.43■■□□□ 1.18
GTDC1-219ENST00000542155 LRRC37A3O60309 1634 aa22.42■■□□□ 1.18
GTDC1-219ENST00000542155 RNMTO43148 476 aaKnown RBP22.42■■□□□ 1.18
GTDC1-219ENST00000542155 AFF2P51816 1311 aa22.42■■□□□ 1.18
GTDC1-219ENST00000542155 FBXO41Q8TF61 875 aa22.42■■□□□ 1.18
GTDC1-219ENST00000542155 CHL1O00533 1208 aa22.41■■□□□ 1.18
GTDC1-219ENST00000542155 GNAI1P63096 354 aa22.41■■□□□ 1.18
GTDC1-219ENST00000542155 EXOSC9Q06265 439 aaKnown RBP22.41■■□□□ 1.18
GTDC1-219ENST00000542155 IFNL2Q8IZJ0 200 aa22.41■■□□□ 1.18
GTDC1-219ENST00000542155 KDM6AO15550 1401 aaPredicted RBP22.41■■□□□ 1.18
GTDC1-219ENST00000542155 CALD1Q05682 793 aaKnown RBP22.41■■□□□ 1.18
GTDC1-219ENST00000542155 VPS72Q15906 364 aa22.41■■□□□ 1.18
GTDC1-219ENST00000542155 DDX54Q8TDD1 881 aaKnown RBP22.41■■□□□ 1.18
GTDC1-219ENST00000542155 RCAN3Q9UKA8 241 aa22.4■■□□□ 1.18
GTDC1-219ENST00000542155 PLEKHG2Q9H7P9 1386 aa22.39■■□□□ 1.18
GTDC1-219ENST00000542155 WNK3Q9BYP7 1800 aa22.39■■□□□ 1.18
GTDC1-219ENST00000542155 KRT24Q2M2I5 525 aa22.38■■□□□ 1.17
GTDC1-219ENST00000542155 ADAMTS7Q9UKP4 1686 aa22.38■■□□□ 1.17
GTDC1-219ENST00000542155 TSPYL6Q8N831 410 aa22.37■■□□□ 1.17
GTDC1-219ENST00000542155 THRAP3Q9Y2W1 955 aaKnown RBP22.37■■□□□ 1.17
GTDC1-219ENST00000542155 PCDH11XQ9BZA7 1347 aa22.37■■□□□ 1.17
GTDC1-219ENST00000542155 PCDH11YQ9BZA8 1340 aa22.37■■□□□ 1.17
GTDC1-219ENST00000542155 FAM98CQ17RN3 349 aaKnown RBP22.36■■□□□ 1.17
GTDC1-219ENST00000542155 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.36■■□□□ 1.17
GTDC1-219ENST00000542155 SCN11AQ9UI33 1791 aa22.36■■□□□ 1.17
GTDC1-219ENST00000542155 TAF7Q15545 349 aaPredicted RBP22.36■■□□□ 1.17
GTDC1-219ENST00000542155 C8orf58Q8NAV2 365 aa22.35■■□□□ 1.17
GTDC1-219ENST00000542155 ELL2O00472 640 aaPredicted RBP22.35■■□□□ 1.17
GTDC1-219ENST00000542155 BARGINQ6ZT62 677 aa22.35■■□□□ 1.17
GTDC1-219ENST00000542155 TSPYL4Q9UJ04 414 aa22.34■■□□□ 1.17
GTDC1-219ENST00000542155 KCNQ3O43525 872 aa22.34■■□□□ 1.17
GTDC1-219ENST00000542155 DCAF5Q96JK2 942 aa22.34■■□□□ 1.17
GTDC1-219ENST00000542155 EXOC5O00471 708 aa22.33■■□□□ 1.17
GTDC1-219ENST00000542155 TEFQ10587 303 aa22.33■■□□□ 1.17
GTDC1-219ENST00000542155 BCAR3O75815 825 aa22.33■■□□□ 1.16
GTDC1-219ENST00000542155 NKX1-1Q15270 411 aaPredicted RBP22.33■■□□□ 1.16
GTDC1-219ENST00000542155 NFATC2IPQ8NCF5 419 aa22.33■■□□□ 1.16
GTDC1-219ENST00000542155 SIPA1L3O60292 1781 aaPredicted RBP22.32■■□□□ 1.16
GTDC1-219ENST00000542155 GLI3P10071 1580 aa22.31■■□□□ 1.16
GTDC1-219ENST00000542155 GJD4Q96KN9 370 aaPredicted RBP22.31■■□□□ 1.16
GTDC1-219ENST00000542155 SLC52A2Q9HAB3 445 aa22.31■■□□□ 1.16
GTDC1-219ENST00000542155 RNF123Q5XPI4 1314 aa22.3■■□□□ 1.16
GTDC1-219ENST00000542155 IRX6P78412 446 aaPredicted RBP22.3■■□□□ 1.16
GTDC1-219ENST00000542155 CDCA7Q9BWT1 371 aaPredicted RBP22.3■■□□□ 1.16
GTDC1-219ENST00000542155 ATRNO75882 1429 aa22.3■■□□□ 1.16
GTDC1-219ENST00000542155 VAMP4O75379 141 aa22.3■■□□□ 1.16
GTDC1-219ENST00000542155 RARSP54136 660 aaKnown RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms