RNA–Protein interactions for RNA: ENST00000542095.6

NECAP1-206, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,385 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-206ENST00000542095 ESCO1Q5FWF5 840 aa13.7□□□□□ -0.22
NECAP1-206ENST00000542095 PSME1Q06323 249 aa13.69□□□□□ -0.22
NECAP1-206ENST00000542095 SMC5Q8IY18 1101 aa13.69□□□□□ -0.22
NECAP1-206ENST00000542095 LRRC37A3O60309 1634 aa13.69□□□□□ -0.22
NECAP1-206ENST00000542095 ZBTB7BO15156 539 aaPredicted RBP13.69□□□□□ -0.22
NECAP1-206ENST00000542095 HTATSF1O43719 755 aaKnown RBP13.69□□□□□ -0.22
NECAP1-206ENST00000542095 NFAT5O94916 1531 aa13.69□□□□□ -0.22
NECAP1-206ENST00000542095 PHRF1Q9P1Y6 1649 aaKnown RBP13.69□□□□□ -0.22
NECAP1-206ENST00000542095 FOXO3O43524 673 aa13.67□□□□□ -0.22
NECAP1-206ENST00000542095 KCNH5Q8NCM2 988 aa13.67□□□□□ -0.22
NECAP1-206ENST00000542095 KIF1AQ12756 1690 aa13.67□□□□□ -0.22
NECAP1-206ENST00000542095 TSPYL4Q9UJ04 414 aa13.66□□□□□ -0.22
NECAP1-206ENST00000542095 KRT24Q2M2I5 525 aa13.66□□□□□ -0.22
NECAP1-206ENST00000542095 IP6K1Q92551 441 aa13.66□□□□□ -0.22
NECAP1-206ENST00000542095 CACNA1FO60840 1977 aa13.65□□□□□ -0.22
NECAP1-206ENST00000542095 GNAT3A8MTJ3 354 aa13.65□□□□□ -0.22
NECAP1-206ENST00000542095 LTV1Q96GA3 475 aaPredicted RBP13.65□□□□□ -0.22
NECAP1-206ENST00000542095 PTPRCP08575 1304 aa13.65□□□□□ -0.22
NECAP1-206ENST00000542095 DAXXQ9UER7 740 aaPredicted RBP13.65□□□□□ -0.22
NECAP1-206ENST00000542095 RGPD2P0DJD1 1756 aa13.64□□□□□ -0.23
NECAP1-206ENST00000542095 TRPM3Q9HCF6 1732 aaPredicted RBP13.64□□□□□ -0.23
NECAP1-206ENST00000542095 MAP3K5Q99683 1374 aa13.64□□□□□ -0.23
NECAP1-206ENST00000542095 NUCB1Q02818 461 aa13.64□□□□□ -0.23
NECAP1-206ENST00000542095 PROSER2Q86WR7 435 aaPredicted RBP13.64□□□□□ -0.23
NECAP1-206ENST00000542095 GCC1Q96CN9 775 aa13.64□□□□□ -0.23
NECAP1-206ENST00000542095 SLIT3O75094 1523 aa13.63□□□□□ -0.23
NECAP1-206ENST00000542095 INTS3Q68E01 1043 aaKnown RBP13.63□□□□□ -0.23
NECAP1-206ENST00000542095 UPF2Q9HAU5 1272 aaKnown RBP13.63□□□□□ -0.23
NECAP1-206ENST00000542095 RGS12O14924 1447 aa13.63□□□□□ -0.23
NECAP1-206ENST00000542095 ORAI2Q96SN7 254 aa13.63□□□□□ -0.23
NECAP1-206ENST00000542095 MIS18AQ9NYP9 233 aa13.63□□□□□ -0.23
NECAP1-206ENST00000542095 USP19O94966 1318 aa13.62□□□□□ -0.23
NECAP1-206ENST00000542095 FAM208AQ9UK61 1670 aaKnown RBP13.62□□□□□ -0.23
NECAP1-206ENST00000542095 C1orf115Q9H7X2 142 aa13.62□□□□□ -0.23
NECAP1-206ENST00000542095 SEC24BO95487 1268 aa13.61□□□□□ -0.23
NECAP1-206ENST00000542095 CHD1LQ86WJ1 897 aa13.61□□□□□ -0.23
NECAP1-206ENST00000542095 MSH6P52701 1360 aa13.61□□□□□ -0.23
NECAP1-206ENST00000542095 BABAM1Q9NWV8 329 aa13.61□□□□□ -0.23
NECAP1-206ENST00000542095 SLC4A2P04920 1241 aa13.6□□□□□ -0.23
NECAP1-206ENST00000542095 NBR1Q14596 966 aa13.6□□□□□ -0.23
NECAP1-206ENST00000542095 USHBP1Q8N6Y0 703 aa13.6□□□□□ -0.23
NECAP1-206ENST00000542095 LNPKQ9C0E8 428 aa13.6□□□□□ -0.23
NECAP1-206ENST00000542095 C19orf44Q9H6X5 657 aa13.6□□□□□ -0.23
NECAP1-206ENST00000542095 C1orf167Q5SNV9 1468 aa13.6□□□□□ -0.23
NECAP1-206ENST00000542095 SOS1Q07889 1333 aaPredicted RBP13.6□□□□□ -0.23
NECAP1-206ENST00000542095 LMO7Q8WWI1 1683 aa13.6□□□□□ -0.23
NECAP1-206ENST00000542095 ZBTB7CA1YPR0 619 aa13.59□□□□□ -0.23
NECAP1-206ENST00000542095 GCP02774 474 aa13.59□□□□□ -0.23
NECAP1-206ENST00000542095 SIRT2Q8IXJ6 389 aa13.59□□□□□ -0.23
NECAP1-206ENST00000542095 IL17REQ8NFR9 667 aa13.59□□□□□ -0.23
NECAP1-206ENST00000542095 TAF7Q15545 349 aaPredicted RBP13.58□□□□□ -0.24
NECAP1-206ENST00000542095 ANKRD45Q5TZF3 282 aa13.58□□□□□ -0.24
NECAP1-206ENST00000542095 NBPF6Q5VWK0 638 aa13.58□□□□□ -0.24
NECAP1-206ENST00000542095 NBPF4Q96M43 638 aa13.58□□□□□ -0.24
NECAP1-206ENST00000542095 STK31Q9BXU1 1019 aa13.58□□□□□ -0.24
NECAP1-206ENST00000542095 ALS2Q96Q42 1657 aa13.58□□□□□ -0.24
NECAP1-206ENST00000542095 STRCP1A6NGW2 1772 aa13.58□□□□□ -0.24
NECAP1-206ENST00000542095 XPCQ01831 940 aaPredicted RBP13.58□□□□□ -0.24
NECAP1-206ENST00000542095 KRT28Q7Z3Y7 464 aa13.58□□□□□ -0.24
NECAP1-206ENST00000542095 CCDC30Q5VVM6 783 aa13.57□□□□□ -0.24
NECAP1-206ENST00000542095 ARHGEF25Q86VW2 580 aa13.57□□□□□ -0.24
NECAP1-206ENST00000542095 N4BP2Q86UW6 1770 aaPredicted RBP13.57□□□□□ -0.24
NECAP1-206ENST00000542095 CAMTA1Q9Y6Y1 1673 aa13.57□□□□□ -0.24
NECAP1-206ENST00000542095 KDM3BQ7LBC6 1761 aa13.57□□□□□ -0.24
NECAP1-206ENST00000542095 RGPD5Q99666 1765 aa13.57□□□□□ -0.24
NECAP1-206ENST00000542095 LMOD2Q6P5Q4 547 aa13.57□□□□□ -0.24
NECAP1-206ENST00000542095 TBC1D32Q96NH3 1257 aa13.57□□□□□ -0.24
NECAP1-206ENST00000542095 SLC4A3P48751 1232 aa13.56□□□□□ -0.24
NECAP1-206ENST00000542095 MST1RQ04912 1400 aa13.56□□□□□ -0.24
NECAP1-206ENST00000542095 MED1Q15648 1581 aaPredicted RBP13.56□□□□□ -0.24
NECAP1-206ENST00000542095 CCT4P50991 539 aaKnown RBP13.56□□□□□ -0.24
NECAP1-206ENST00000542095 RTL5Q5HYW3 569 aaPredicted RBP13.56□□□□□ -0.24
NECAP1-206ENST00000542095 RPAP2Q8IXW5 612 aaPredicted RBP13.56□□□□□ -0.24
NECAP1-206ENST00000542095 CEMIPQ8WUJ3 1361 aa13.56□□□□□ -0.24
NECAP1-206ENST00000542095 DCCP43146 1447 aa13.56□□□□□ -0.24
NECAP1-206ENST00000542095 NCOA3Q9Y6Q9 1424 aa13.56□□□□□ -0.24
NECAP1-206ENST00000542095 NCAPD2Q15021 1401 aa13.55□□□□□ -0.24
NECAP1-206ENST00000542095 ATP10DQ9P241 1426 aa13.55□□□□□ -0.24
NECAP1-206ENST00000542095 ATF3P18847 181 aa13.55□□□□□ -0.24
NECAP1-206ENST00000542095 BECN1Q14457 450 aa13.55□□□□□ -0.24
NECAP1-206ENST00000542095 ANKRD44Q8N8A2 993 aa13.55□□□□□ -0.24
NECAP1-206ENST00000542095 G2E3Q7L622 706 aa13.54□□□□□ -0.24
NECAP1-206ENST00000542095 PLEKHO1Q53GL0 409 aaPredicted RBP13.54□□□□□ -0.24
NECAP1-206ENST00000542095 BMP2KLQ5H9B9 411 aa13.54□□□□□ -0.24
NECAP1-206ENST00000542095 DCTPP1Q9H773 170 aa13.54□□□□□ -0.24
NECAP1-206ENST00000542095 AMOTQ4VCS5 1084 aa13.53□□□□□ -0.24
NECAP1-206ENST00000542095 LRRC59Q96AG4 307 aaKnown RBP13.53□□□□□ -0.24
NECAP1-206ENST00000542095 TMEM94Q12767 1356 aa13.53□□□□□ -0.24
NECAP1-206ENST00000542095 AKAP4Q5JQC9 854 aa13.53□□□□□ -0.24
NECAP1-206ENST00000542095 CEP85Q6P2H3 762 aa13.53□□□□□ -0.24
NECAP1-206ENST00000542095 SLC4A10Q6U841 1118 aa13.53□□□□□ -0.24
NECAP1-206ENST00000542095 ANKRD24Q8TF21 1146 aa13.53□□□□□ -0.24
NECAP1-206ENST00000542095 MEIS3Q99687 375 aa13.53□□□□□ -0.24
NECAP1-206ENST00000542095 PLEKHG5O94827 1062 aa13.52□□□□□ -0.24
NECAP1-206ENST00000542095 MFAP1P55081 439 aaKnown RBP13.52□□□□□ -0.25
NECAP1-206ENST00000542095 FLIIQ13045 1269 aa13.52□□□□□ -0.25
NECAP1-206ENST00000542095 ZNF530Q6P9A1 599 aaPredicted RBP13.52□□□□□ -0.25
NECAP1-206ENST00000542095 F6X3S4 739 aa13.51□□□□□ -0.25
NECAP1-206ENST00000542095 USP35Q9P2H5 1018 aa13.51□□□□□ -0.25
NECAP1-206ENST00000542095 PXDNLA1KZ92 1463 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms