RNA–Protein interactions for RNA: ENST00000541774.5

ERBB2-204, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5 BASIC

Gene ERBB2, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-204ENST00000541774 NGDNQ8NEJ9 315 aaKnown RBP13.04□□□□□ -0.32
ERBB2-204ENST00000541774 ASXL2Q76L83 1435 aa13.04□□□□□ -0.32
ERBB2-204ENST00000541774 GOLIM4O00461 696 aa13.04□□□□□ -0.32
ERBB2-204ENST00000541774 NF2P35240 595 aa13.04□□□□□ -0.32
ERBB2-204ENST00000541774 NUP62CLQ9H1M0 184 aa13.04□□□□□ -0.32
ERBB2-204ENST00000541774 GGNBP2Q9H3C7 697 aa13.04□□□□□ -0.32
ERBB2-204ENST00000541774 CLIP2Q9UDT6 1046 aa13.04□□□□□ -0.32
ERBB2-204ENST00000541774 FANCAO15360 1455 aa13.03□□□□□ -0.32
ERBB2-204ENST00000541774 CCDC186Q7Z3E2 898 aa13.03□□□□□ -0.32
ERBB2-204ENST00000541774 SMC5Q8IY18 1101 aa13.03□□□□□ -0.32
ERBB2-204ENST00000541774 TRAPPC8Q9Y2L5 1435 aa13.03□□□□□ -0.32
ERBB2-204ENST00000541774 IRX5P78411 483 aaPredicted RBP13.03□□□□□ -0.32
ERBB2-204ENST00000541774 SLC4A10Q6U841 1118 aa13.03□□□□□ -0.32
ERBB2-204ENST00000541774 CHD1LQ86WJ1 897 aa13.03□□□□□ -0.32
ERBB2-204ENST00000541774 MVPQ14764 893 aaKnown RBP13.03□□□□□ -0.32
ERBB2-204ENST00000541774 TXNDC2Q86VQ3 553 aa13.03□□□□□ -0.32
ERBB2-204ENST00000541774 RBM33Q96EV2 1170 aaKnown RBP13.03□□□□□ -0.32
ERBB2-204ENST00000541774 MAP3K11Q16584 847 aa13.02□□□□□ -0.32
ERBB2-204ENST00000541774 ZSCAN20P17040 1043 aaPredicted RBP13.02□□□□□ -0.32
ERBB2-204ENST00000541774 SLU7O95391 586 aaKnown RBP13.02□□□□□ -0.33
ERBB2-204ENST00000541774 ZNF445P59923 1031 aa13.02□□□□□ -0.33
ERBB2-204ENST00000541774 EFCC1Q9HA90 598 aa13.02□□□□□ -0.33
ERBB2-204ENST00000541774 SHTN1A0MZ66 631 aa13.02□□□□□ -0.33
ERBB2-204ENST00000541774 MAP2K2P36507 400 aa13.02□□□□□ -0.33
ERBB2-204ENST00000541774 MAPKBP1O60336 1514 aa13.01□□□□□ -0.33
ERBB2-204ENST00000541774 CAMK4Q16566 473 aa13.01□□□□□ -0.33
ERBB2-204ENST00000541774 NUTM2GQ5VZR2 741 aa13.01□□□□□ -0.33
ERBB2-204ENST00000541774 IDI1Q13907 227 aa13.01□□□□□ -0.33
ERBB2-204ENST00000541774 ADGRF5Q8IZF2 1346 aa13.01□□□□□ -0.33
ERBB2-204ENST00000541774 SNX21Q969T3 373 aa13.01□□□□□ -0.33
ERBB2-204ENST00000541774 TSR1Q2NL82 804 aaKnown RBP13□□□□□ -0.33
ERBB2-204ENST00000541774 DYDC1Q8WWB3 177 aa13□□□□□ -0.33
ERBB2-204ENST00000541774 PRAM1Q96QH2 718 aa13□□□□□ -0.33
ERBB2-204ENST00000541774 ATP2B3Q16720 1220 aa13□□□□□ -0.33
ERBB2-204ENST00000541774 DUSP27Q5VZP5 1158 aa13□□□□□ -0.33
ERBB2-204ENST00000541774 GBP6Q6ZN66 633 aa13□□□□□ -0.33
ERBB2-204ENST00000541774 LRRCC1Q9C099 1032 aa13□□□□□ -0.33
ERBB2-204ENST00000541774 TERF2IPQ9NYB0 399 aa13□□□□□ -0.33
ERBB2-204ENST00000541774 DCTN1Q14203 1278 aa13□□□□□ -0.33
ERBB2-204ENST00000541774 PES1O00541 588 aaKnown RBP12.99□□□□□ -0.33
ERBB2-204ENST00000541774 KINO60870 393 aaKnown RBP12.99□□□□□ -0.33
ERBB2-204ENST00000541774 GAS2L2Q8NHY3 880 aa12.99□□□□□ -0.33
ERBB2-204ENST00000541774 SYCP2Q9BX26 1530 aa12.99□□□□□ -0.33
ERBB2-204ENST00000541774 PPP2R1AP30153 589 aa12.99□□□□□ -0.33
ERBB2-204ENST00000541774 ATP6V1AP38606 617 aa12.99□□□□□ -0.33
ERBB2-204ENST00000541774 SNW1Q13573 536 aaKnown RBP12.99□□□□□ -0.33
ERBB2-204ENST00000541774 JAKMIP3Q5VZ66 844 aa12.99□□□□□ -0.33
ERBB2-204ENST00000541774 RUNDC1Q96C34 613 aa12.99□□□□□ -0.33
ERBB2-204ENST00000541774 GCC1Q96CN9 775 aa12.99□□□□□ -0.33
ERBB2-204ENST00000541774 ARFGAP3Q9NP61 516 aa12.99□□□□□ -0.33
ERBB2-204ENST00000541774 RBM28Q9NW13 759 aaKnown RBP12.99□□□□□ -0.33
ERBB2-204ENST00000541774 CCDC34Q96HJ3 373 aa12.99□□□□□ -0.33
ERBB2-204ENST00000541774 EVC2Q86UK5 1308 aa12.98□□□□□ -0.33
ERBB2-204ENST00000541774 ZKSCAN1P17029 563 aaPredicted RBP12.98□□□□□ -0.33
ERBB2-204ENST00000541774 KRT85P78386 507 aa12.98□□□□□ -0.33
ERBB2-204ENST00000541774 C1orf115Q9H7X2 142 aa12.98□□□□□ -0.33
ERBB2-204ENST00000541774 BCCIPQ9P287 314 aaKnown RBP eCLIP12.98□□□□□ -0.33
ERBB2-204ENST00000541774 SFPQP23246 707 aaKnown RBP eCLIP12.98□□□□□ -0.33
ERBB2-204ENST00000541774 ZSCAN26Q16670 478 aa12.98□□□□□ -0.33
ERBB2-204ENST00000541774 RBM42Q9BTD8 480 aaKnown RBP12.98□□□□□ -0.33
ERBB2-204ENST00000541774 TMEM51Q9NW97 253 aa12.98□□□□□ -0.33
ERBB2-204ENST00000541774 ARHGAP29Q52LW3 1261 aa12.98□□□□□ -0.33
ERBB2-204ENST00000541774 LRCH2Q5VUJ6 765 aa12.98□□□□□ -0.33
ERBB2-204ENST00000541774 LRPPRCP42704 1394 aaKnown RBP12.98□□□□□ -0.33
ERBB2-204ENST00000541774 IPO7O95373 1038 aaKnown RBP12.97□□□□□ -0.33
ERBB2-204ENST00000541774 PTGS1P23219 599 aa12.97□□□□□ -0.33
ERBB2-204ENST00000541774 GIMAP6Q6P9H5 292 aa12.97□□□□□ -0.33
ERBB2-204ENST00000541774 LOC102724159A0A0B4J2E5 919 aa12.97□□□□□ -0.33
ERBB2-204ENST00000541774 NEMFO60524 1076 aa12.97□□□□□ -0.33
ERBB2-204ENST00000541774 MCM6Q14566 821 aa12.97□□□□□ -0.33
ERBB2-204ENST00000541774 PWP2Q15269 919 aaKnown RBP12.97□□□□□ -0.33
ERBB2-204ENST00000541774 CCDC171Q6TFL3 1326 aa12.97□□□□□ -0.33
ERBB2-204ENST00000541774 ERBINQ96RT1 1412 aa12.97□□□□□ -0.33
ERBB2-204ENST00000541774 MPHOSPH10O00566 681 aaKnown RBP12.97□□□□□ -0.33
ERBB2-204ENST00000541774 ERC2O15083 957 aa12.97□□□□□ -0.33
ERBB2-204ENST00000541774 TCP11L2Q8N4U5 519 aa12.97□□□□□ -0.33
ERBB2-204ENST00000541774 NEK11Q8NG66 645 aa12.97□□□□□ -0.33
ERBB2-204ENST00000541774 SMARCC1Q92922 1105 aaPredicted RBP12.97□□□□□ -0.33
ERBB2-204ENST00000541774 DHX8Q14562 1220 aaKnown RBP12.97□□□□□ -0.33
ERBB2-204ENST00000541774 RRP12Q5JTH9 1297 aaKnown RBP12.97□□□□□ -0.33
ERBB2-204ENST00000541774 WAPLQ7Z5K2 1190 aa12.97□□□□□ -0.33
ERBB2-204ENST00000541774 CAGE1Q8TC20 777 aa12.97□□□□□ -0.33
ERBB2-204ENST00000541774 CKAP2LQ8IYA6 745 aa12.96□□□□□ -0.33
ERBB2-204ENST00000541774 PLCH2O75038 1416 aa12.96□□□□□ -0.33
ERBB2-204ENST00000541774 KDM2BQ8NHM5 1336 aa12.96□□□□□ -0.33
ERBB2-204ENST00000541774 CASQ1P31415 396 aa12.96□□□□□ -0.33
ERBB2-204ENST00000541774 RNF187Q5TA31 235 aaPredicted RBP12.96□□□□□ -0.33
ERBB2-204ENST00000541774 PPM1EQ8WY54 764 aa12.96□□□□□ -0.33
ERBB2-204ENST00000541774 GBP3Q9H0R5 595 aa12.96□□□□□ -0.33
ERBB2-204ENST00000541774 GBP2P32456 591 aaPredicted RBP12.96□□□□□ -0.34
ERBB2-204ENST00000541774 CHMP4CQ96CF2 233 aa12.96□□□□□ -0.34
ERBB2-204ENST00000541774 CRACR2AQ9BSW2 395 aa12.96□□□□□ -0.34
ERBB2-204ENST00000541774 SKILP12757 684 aa12.95□□□□□ -0.34
ERBB2-204ENST00000541774 ELF2Q15723 593 aa12.95□□□□□ -0.34
ERBB2-204ENST00000541774 CPSF2Q9P2I0 782 aaKnown RBP12.95□□□□□ -0.34
ERBB2-204ENST00000541774 FOSBP53539 338 aa12.94□□□□□ -0.34
ERBB2-204ENST00000541774 CEBPZQ03701 1054 aaKnown RBP12.94□□□□□ -0.34
ERBB2-204ENST00000541774 RPAINQ86UA6 219 aa12.94□□□□□ -0.34
ERBB2-204ENST00000541774 ERO1AQ96HE7 468 aa12.94□□□□□ -0.34
ERBB2-204ENST00000541774 ANTXR1Q9H6X2 564 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms