RNA–Protein interactions for RNA: ENST00000541698.5

PTPN6-215, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-215ENST00000541698 WDR90Q96KV7 1748 aa20.66■□□□□ 0.9
PTPN6-215ENST00000541698 KIAA1210Q9ULL0 1709 aa20.65■□□□□ 0.9
PTPN6-215ENST00000541698 CICQ96RK0 1608 aaPredicted RBP20.64■□□□□ 0.9
PTPN6-215ENST00000541698 IGSF1Q8N6C5 1336 aa20.64■□□□□ 0.89
PTPN6-215ENST00000541698 PRIM1P49642 420 aaKnown RBP20.64■□□□□ 0.89
PTPN6-215ENST00000541698 FLAD1Q8NFF5 587 aa20.62■□□□□ 0.89
PTPN6-215ENST00000541698 RBM46Q8TBY0 533 aaKnown RBP20.62■□□□□ 0.89
PTPN6-215ENST00000541698 DDX54Q8TDD1 881 aaKnown RBP20.62■□□□□ 0.89
PTPN6-215ENST00000541698 NBPF1Q3BBV0 1214 aa20.61■□□□□ 0.89
PTPN6-215ENST00000541698 SYTL4Q96C24 671 aaPredicted RBP20.61■□□□□ 0.89
PTPN6-215ENST00000541698 ANKRD24Q8TF21 1146 aa20.6■□□□□ 0.89
PTPN6-215ENST00000541698 HMGB2P26583 209 aaKnown RBP20.58■□□□□ 0.89
PTPN6-215ENST00000541698 USP31Q70CQ4 1352 aa20.58■□□□□ 0.88
PTPN6-215ENST00000541698 HTRA3P83110 453 aa20.57■□□□□ 0.88
PTPN6-215ENST00000541698 NMRK2Q9NPI5 230 aa20.57■□□□□ 0.88
PTPN6-215ENST00000541698 FSTL1Q12841 308 aa20.56■□□□□ 0.88
PTPN6-215ENST00000541698 WWC3Q9ULE0 1092 aa20.56■□□□□ 0.88
PTPN6-215ENST00000541698 USP47Q96K76 1375 aa20.56■□□□□ 0.88
PTPN6-215ENST00000541698 DOT1LQ8TEK3 1739 aa20.56■□□□□ 0.88
PTPN6-215ENST00000541698 EVC2Q86UK5 1308 aa20.54■□□□□ 0.88
PTPN6-215ENST00000541698 USP54Q70EL1 1684 aa20.53■□□□□ 0.88
PTPN6-215ENST00000541698 KTN1Q86UP2 1357 aaKnown RBP20.52■□□□□ 0.88
PTPN6-215ENST00000541698 C5P01031 1676 aa20.51■□□□□ 0.87
PTPN6-215ENST00000541698 LTN1O94822 1766 aa20.49■□□□□ 0.87
PTPN6-215ENST00000541698 RAB3GAP2Q9H2M9 1393 aa20.49■□□□□ 0.87
PTPN6-215ENST00000541698 C16orf71Q8IYS4 520 aaPredicted RBP20.48■□□□□ 0.87
PTPN6-215ENST00000541698 ZCRB1Q8TBF4 217 aaKnown RBP20.48■□□□□ 0.87
PTPN6-215ENST00000541698 C10orf71Q711Q0 1435 aa20.46■□□□□ 0.87
PTPN6-215ENST00000541698 FAM208AQ9UK61 1670 aaKnown RBP20.46■□□□□ 0.87
PTPN6-215ENST00000541698 AMIGO3Q86WK7 504 aa20.46■□□□□ 0.87
PTPN6-215ENST00000541698 PXDNLA1KZ92 1463 aa20.45■□□□□ 0.86
PTPN6-215ENST00000541698 HSPA1AP0DMV8 641 aaKnown RBP20.45■□□□□ 0.86
PTPN6-215ENST00000541698 HSPA1BP0DMV9 641 aaKnown RBP20.45■□□□□ 0.86
PTPN6-215ENST00000541698 IP6K1Q92551 441 aa20.45■□□□□ 0.86
PTPN6-215ENST00000541698 TAF1LQ8IZX4 1826 aa20.45■□□□□ 0.86
PTPN6-215ENST00000541698 NSD3Q9BZ95 1437 aa20.44■□□□□ 0.86
PTPN6-215ENST00000541698 MON2Q7Z3U7 1717 aa20.44■□□□□ 0.86
PTPN6-215ENST00000541698 NME9Q86XW9 330 aa20.44■□□□□ 0.86
PTPN6-215ENST00000541698 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.44■□□□□ 0.86
PTPN6-215ENST00000541698 PCDH10Q9P2E7 1040 aa20.44■□□□□ 0.86
PTPN6-215ENST00000541698 PLEKHG2Q9H7P9 1386 aa20.44■□□□□ 0.86
PTPN6-215ENST00000541698 TOGARAM1Q9Y4F4 1720 aa20.44■□□□□ 0.86
PTPN6-215ENST00000541698 AK7Q96M32 723 aa20.43■□□□□ 0.86
PTPN6-215ENST00000541698 PALLDQ8WX93 1383 aa20.43■□□□□ 0.86
PTPN6-215ENST00000541698 SBNO2Q9Y2G9 1366 aa20.43■□□□□ 0.86
PTPN6-215ENST00000541698 C4BP0C0L5 1744 aa20.42■□□□□ 0.86
PTPN6-215ENST00000541698 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.42■□□□□ 0.86
PTPN6-215ENST00000541698 TGFB2P61812 414 aa20.42■□□□□ 0.86
PTPN6-215ENST00000541698 SSFA2P28290 1259 aa20.41■□□□□ 0.86
PTPN6-215ENST00000541698 ARHGAP27Q6ZUM4 889 aa20.41■□□□□ 0.86
PTPN6-215ENST00000541698 BCS1LQ9Y276 419 aa20.41■□□□□ 0.86
PTPN6-215ENST00000541698 MEGF6O75095 1541 aa20.41■□□□□ 0.86
PTPN6-215ENST00000541698 KIAA1551Q9HCM1 1747 aa20.41■□□□□ 0.86
PTPN6-215ENST00000541698 UBR3Q6ZT12 1888 aa20.4■□□□□ 0.86
PTPN6-215ENST00000541698 KDM2BQ8NHM5 1336 aa20.4■□□□□ 0.86
PTPN6-215ENST00000541698 KIF13BQ9NQT8 1826 aa20.39■□□□□ 0.86
PTPN6-215ENST00000541698 SMC1BQ8NDV3 1235 aa20.39■□□□□ 0.85
PTPN6-215ENST00000541698 CGNL1Q0VF96 1302 aa20.38■□□□□ 0.85
PTPN6-215ENST00000541698 PHF14O94880 888 aa20.38■□□□□ 0.85
PTPN6-215ENST00000541698 C9orf131Q5VYM1 1079 aa20.38■□□□□ 0.85
PTPN6-215ENST00000541698 LTV1Q96GA3 475 aaPredicted RBP20.38■□□□□ 0.85
PTPN6-215ENST00000541698 CD163L1Q9NR16 1453 aa20.37■□□□□ 0.85
PTPN6-215ENST00000541698 SMIM5Q71RC9 77 aa20.36■□□□□ 0.85
PTPN6-215ENST00000541698 SMARCC1Q92922 1105 aaPredicted RBP20.36■□□□□ 0.85
PTPN6-215ENST00000541698 KCPQ6ZWJ8 1503 aa20.36■□□□□ 0.85
PTPN6-215ENST00000541698 A0A0G2JLW4 131 aa20.35■□□□□ 0.85
PTPN6-215ENST00000541698 MMP10P09238 476 aa20.35■□□□□ 0.85
PTPN6-215ENST00000541698 RRAGCQ9HB90 399 aa20.34■□□□□ 0.85
PTPN6-215ENST00000541698 EDC4Q6P2E9 1401 aaKnown RBP20.33■□□□□ 0.84
PTPN6-215ENST00000541698 N4BP2Q86UW6 1770 aaPredicted RBP20.32■□□□□ 0.84
PTPN6-215ENST00000541698 FCHSD2O94868 740 aa20.32■□□□□ 0.84
PTPN6-215ENST00000541698 HOXC9P31274 260 aa20.32■□□□□ 0.84
PTPN6-215ENST00000541698 TNRC6CQ9HCJ0 1690 aaKnown RBP20.32■□□□□ 0.84
PTPN6-215ENST00000541698 PKD1L3Q7Z443 1732 aa20.31■□□□□ 0.84
PTPN6-215ENST00000541698 DPEP1P16444 411 aa20.31■□□□□ 0.84
PTPN6-215ENST00000541698 MPRIPQ6WCQ1 1025 aa20.31■□□□□ 0.84
PTPN6-215ENST00000541698 MAP3K19Q56UN5 1328 aa20.29■□□□□ 0.84
PTPN6-215ENST00000541698 LINC00116Q8NCU8 138 aa20.29■□□□□ 0.84
PTPN6-215ENST00000541698 PCDH11XQ9BZA7 1347 aa20.28■□□□□ 0.84
PTPN6-215ENST00000541698 PCDH11YQ9BZA8 1340 aa20.28■□□□□ 0.84
PTPN6-215ENST00000541698 BRCA1P38398 1863 aaKnown RBP20.28■□□□□ 0.84
PTPN6-215ENST00000541698 KCNA3P22001 575 aa20.28■□□□□ 0.84
PTPN6-215ENST00000541698 NBPF6Q5VWK0 638 aa20.28■□□□□ 0.84
PTPN6-215ENST00000541698 HDGFL2Q7Z4V5 671 aaPredicted RBP20.28■□□□□ 0.84
PTPN6-215ENST00000541698 RAPGEF4Q8WZA2 1011 aa20.28■□□□□ 0.84
PTPN6-215ENST00000541698 NBPF4Q96M43 638 aa20.28■□□□□ 0.84
PTPN6-215ENST00000541698 NLGN1Q8N2Q7 840 aa20.27■□□□□ 0.84
PTPN6-215ENST00000541698 DCAF5Q96JK2 942 aa20.27■□□□□ 0.84
PTPN6-215ENST00000541698 RNF181Q9P0P0 153 aa20.27■□□□□ 0.84
PTPN6-215ENST00000541698 ARFGEF1Q9Y6D6 1849 aa20.27■□□□□ 0.84
PTPN6-215ENST00000541698 RGPD2P0DJD1 1756 aa20.26■□□□□ 0.83
PTPN6-215ENST00000541698 MAP2P11137 1827 aaKnown RBP20.26■□□□□ 0.83
PTPN6-215ENST00000541698 LOC102724428A0A0B4J2F2 783 aa20.26■□□□□ 0.83
PTPN6-215ENST00000541698 GNPATO15228 680 aa20.26■□□□□ 0.83
PTPN6-215ENST00000541698 SIK1P57059 783 aa20.26■□□□□ 0.83
PTPN6-215ENST00000541698 ZC3H4Q9UPT8 1303 aaKnown RBP20.26■□□□□ 0.83
PTPN6-215ENST00000541698 CCDC87Q9NVE4 849 aa20.25■□□□□ 0.83
PTPN6-215ENST00000541698 CYP27B1O15528 508 aa20.24■□□□□ 0.83
PTPN6-215ENST00000541698 TATP17735 454 aaPredicted RBP20.24■□□□□ 0.83
PTPN6-215ENST00000541698 AMPHP49418 695 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms