RNA–Protein interactions for RNA: ENST00000541640.5

PRKAB1-206, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,303 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-206ENST00000541640 FLT4P35916 1363 aa16.63■□□□□ 0.25
PRKAB1-206ENST00000541640 MAP3K19Q56UN5 1328 aa16.63■□□□□ 0.25
PRKAB1-206ENST00000541640 RGS12O14924 1447 aa16.62■□□□□ 0.25
PRKAB1-206ENST00000541640 KDM4FA0A1W2PPD8 638 aa16.62■□□□□ 0.25
PRKAB1-206ENST00000541640 MCM10Q7L590 875 aa16.62■□□□□ 0.25
PRKAB1-206ENST00000541640 SLKQ9H2G2 1235 aaPredicted RBP16.62■□□□□ 0.25
PRKAB1-206ENST00000541640 KDRP35968 1356 aa16.62■□□□□ 0.25
PRKAB1-206ENST00000541640 RBM25P49756 843 aaKnown RBP16.61■□□□□ 0.25
PRKAB1-206ENST00000541640 USP54Q70EL1 1684 aa16.61■□□□□ 0.25
PRKAB1-206ENST00000541640 ANKARQ7Z5J8 1434 aa16.61■□□□□ 0.25
PRKAB1-206ENST00000541640 PTPRCP08575 1304 aa16.6■□□□□ 0.25
PRKAB1-206ENST00000541640 NGDNQ8NEJ9 315 aaKnown RBP16.59■□□□□ 0.25
PRKAB1-206ENST00000541640 KRT24Q2M2I5 525 aa16.59■□□□□ 0.25
PRKAB1-206ENST00000541640 MARF1Q9Y4F3 1742 aaKnown RBP16.59■□□□□ 0.25
PRKAB1-206ENST00000541640 IGSF1Q8N6C5 1336 aa16.59■□□□□ 0.25
PRKAB1-206ENST00000541640 ANKLE2Q86XL3 938 aa16.58■□□□□ 0.25
PRKAB1-206ENST00000541640 SOX12O15370 315 aa16.57■□□□□ 0.24
PRKAB1-206ENST00000541640 DCTPP1Q9H773 170 aa16.57■□□□□ 0.24
PRKAB1-206ENST00000541640 ATP10DQ9P241 1426 aa16.57■□□□□ 0.24
PRKAB1-206ENST00000541640 MTHFSDQ2M296 383 aaKnown RBP16.57■□□□□ 0.24
PRKAB1-206ENST00000541640 LRRC37A3O60309 1634 aa16.57■□□□□ 0.24
PRKAB1-206ENST00000541640 ANKRD44Q8N8A2 993 aa16.56■□□□□ 0.24
PRKAB1-206ENST00000541640 AMPHP49418 695 aa16.56■□□□□ 0.24
PRKAB1-206ENST00000541640 RPAP2Q8IXW5 612 aaPredicted RBP16.56■□□□□ 0.24
PRKAB1-206ENST00000541640 GAS2L2Q8NHY3 880 aa16.55■□□□□ 0.24
PRKAB1-206ENST00000541640 RTF1Q92541 710 aaKnown RBP16.55■□□□□ 0.24
PRKAB1-206ENST00000541640 SNX21Q969T3 373 aa16.55■□□□□ 0.24
PRKAB1-206ENST00000541640 EYA1Q99502 592 aa16.55■□□□□ 0.24
PRKAB1-206ENST00000541640 HSCBQ8IWL3 235 aa16.54■□□□□ 0.24
PRKAB1-206ENST00000541640 FOXO3O43524 673 aa16.54■□□□□ 0.24
PRKAB1-206ENST00000541640 MSH6P52701 1360 aa16.54■□□□□ 0.24
PRKAB1-206ENST00000541640 NCOA3Q9Y6Q9 1424 aa16.54■□□□□ 0.24
PRKAB1-206ENST00000541640 HTATSF1O43719 755 aaKnown RBP16.53■□□□□ 0.24
PRKAB1-206ENST00000541640 RTL1A6NKG5 1358 aa16.53■□□□□ 0.24
PRKAB1-206ENST00000541640 TBC1D9Q6ZT07 1266 aa16.53■□□□□ 0.24
PRKAB1-206ENST00000541640 NWD1Q149M9 1564 aa16.52■□□□□ 0.24
PRKAB1-206ENST00000541640 KCNA6P17658 529 aa16.52■□□□□ 0.24
PRKAB1-206ENST00000541640 NLRP6P59044 892 aa16.52■□□□□ 0.24
PRKAB1-206ENST00000541640 CEP85Q6P2H3 762 aa16.52■□□□□ 0.24
PRKAB1-206ENST00000541640 PLEKHM2Q8IWE5 1019 aa16.52■□□□□ 0.24
PRKAB1-206ENST00000541640 CHMP5Q9NZZ3 219 aa16.52■□□□□ 0.24
PRKAB1-206ENST00000541640 TSPYL4Q9UJ04 414 aa16.52■□□□□ 0.24
PRKAB1-206ENST00000541640 SLC4A2P04920 1241 aa16.52■□□□□ 0.23
PRKAB1-206ENST00000541640 EIF5BO60841 1220 aaKnown RBP16.51■□□□□ 0.23
PRKAB1-206ENST00000541640 CDC45O75419 566 aa16.51■□□□□ 0.23
PRKAB1-206ENST00000541640 HOXC9P31274 260 aa16.51■□□□□ 0.23
PRKAB1-206ENST00000541640 MIS18AQ9NYP9 233 aa16.51■□□□□ 0.23
PRKAB1-206ENST00000541640 SPRYD3Q8NCJ5 442 aa16.5■□□□□ 0.23
PRKAB1-206ENST00000541640 KIF2CQ99661 725 aa16.5■□□□□ 0.23
PRKAB1-206ENST00000541640 FAM208AQ9UK61 1670 aaKnown RBP16.5■□□□□ 0.23
PRKAB1-206ENST00000541640 GSPT1P15170 499 aaKnown RBP16.5■□□□□ 0.23
PRKAB1-206ENST00000541640 CHD2O14647 1828 aaKnown RBP16.49■□□□□ 0.23
PRKAB1-206ENST00000541640 MEIS3Q99687 375 aa16.49■□□□□ 0.23
PRKAB1-206ENST00000541640 TTC22Q5TAA0 569 aa16.48■□□□□ 0.23
PRKAB1-206ENST00000541640 NPHP4O75161 1426 aaPredicted RBP16.48■□□□□ 0.23
PRKAB1-206ENST00000541640 DDIT3P35638 169 aa16.48■□□□□ 0.23
PRKAB1-206ENST00000541640 CCT4P50991 539 aaKnown RBP16.48■□□□□ 0.23
PRKAB1-206ENST00000541640 GNAT3A8MTJ3 354 aa16.47■□□□□ 0.23
PRKAB1-206ENST00000541640 CACNA1FO60840 1977 aa16.47■□□□□ 0.23
PRKAB1-206ENST00000541640 SOS1Q07889 1333 aaPredicted RBP16.47■□□□□ 0.23
PRKAB1-206ENST00000541640 HSPA2P54652 639 aa16.47■□□□□ 0.23
PRKAB1-206ENST00000541640 G2E3Q7L622 706 aa16.47■□□□□ 0.23
PRKAB1-206ENST00000541640 MCM4P33991 863 aa16.46■□□□□ 0.23
PRKAB1-206ENST00000541640 ABTB2Q8N961 1025 aa16.46■□□□□ 0.23
PRKAB1-206ENST00000541640 BABAM1Q9NWV8 329 aa16.46■□□□□ 0.23
PRKAB1-206ENST00000541640 LTN1O94822 1766 aa16.46■□□□□ 0.23
PRKAB1-206ENST00000541640 N4BP2Q86UW6 1770 aaPredicted RBP16.46■□□□□ 0.23
PRKAB1-206ENST00000541640 MAP3K5Q99683 1374 aa16.46■□□□□ 0.22
PRKAB1-206ENST00000541640 HMMRO75330 724 aa16.45■□□□□ 0.22
PRKAB1-206ENST00000541640 STK31Q9BXU1 1019 aa16.45■□□□□ 0.22
PRKAB1-206ENST00000541640 C16orf71Q8IYS4 520 aaPredicted RBP16.45■□□□□ 0.22
PRKAB1-206ENST00000541640 NUTM2GQ5VZR2 741 aa16.44■□□□□ 0.22
PRKAB1-206ENST00000541640 CCDC30Q5VVM6 783 aa16.44■□□□□ 0.22
PRKAB1-206ENST00000541640 IL27Q8NEV9 243 aa16.44■□□□□ 0.22
PRKAB1-206ENST00000541640 CIZ1Q9ULV3 898 aaPredicted RBP16.44■□□□□ 0.22
PRKAB1-206ENST00000541640 F6X3S4 739 aa16.43■□□□□ 0.22
PRKAB1-206ENST00000541640 PHF8Q9UPP1 1060 aa16.43■□□□□ 0.22
PRKAB1-206ENST00000541640 SLC4A10Q6U841 1118 aa16.42■□□□□ 0.22
PRKAB1-206ENST00000541640 NFAT5O94916 1531 aa16.42■□□□□ 0.22
PRKAB1-206ENST00000541640 LMTK3Q96Q04 1460 aa16.42■□□□□ 0.22
PRKAB1-206ENST00000541640 HSP90AB1P08238 724 aaKnown RBP16.42■□□□□ 0.22
PRKAB1-206ENST00000541640 IL17REQ8NFR9 667 aa16.42■□□□□ 0.22
PRKAB1-206ENST00000541640 OTUD7AQ8TE49 926 aaPredicted RBP16.42■□□□□ 0.22
PRKAB1-206ENST00000541640 FLIIQ13045 1269 aa16.41■□□□□ 0.22
PRKAB1-206ENST00000541640 BRPF3Q9ULD4 1205 aa16.41■□□□□ 0.22
PRKAB1-206ENST00000541640 PXDNLA1KZ92 1463 aa16.41■□□□□ 0.22
PRKAB1-206ENST00000541640 PHRF1Q9P1Y6 1649 aaKnown RBP16.41■□□□□ 0.22
PRKAB1-206ENST00000541640 K7ELQ4 463 aaPredicted RBP16.41■□□□□ 0.22
PRKAB1-206ENST00000541640 TAF7Q15545 349 aaPredicted RBP16.41■□□□□ 0.22
PRKAB1-206ENST00000541640 ANO8Q9HCE9 1232 aaPredicted RBP16.41■□□□□ 0.22
PRKAB1-206ENST00000541640 SMARCA5O60264 1052 aaPredicted RBP16.4■□□□□ 0.22
PRKAB1-206ENST00000541640 GNAI2P04899 355 aa16.4■□□□□ 0.22
PRKAB1-206ENST00000541640 CD2BP2O95400 341 aaKnown RBP16.4■□□□□ 0.22
PRKAB1-206ENST00000541640 SDSP20132 328 aa16.4■□□□□ 0.22
PRKAB1-206ENST00000541640 IP6K1Q92551 441 aa16.4■□□□□ 0.22
PRKAB1-206ENST00000541640 OSBPL3Q9H4L5 887 aa16.4■□□□□ 0.22
PRKAB1-206ENST00000541640 MED1Q15648 1581 aaPredicted RBP16.39■□□□□ 0.21
PRKAB1-206ENST00000541640 GNAI3P08754 354 aa16.39■□□□□ 0.21
PRKAB1-206ENST00000541640 LTV1Q96GA3 475 aaPredicted RBP16.39■□□□□ 0.21
PRKAB1-206ENST00000541640 USP26Q9BXU7 913 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms