RNA–Protein interactions for RNA: ENST00000541614.5

LRTOMT-218, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best) BASIC

Gene LRTOMT, Length 726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-218ENST00000541614 NPC1L1Q9UHC9 1359 aa8.57□□□□□ -1.04
LRTOMT-218ENST00000541614 DOT1LQ8TEK3 1739 aa8.57□□□□□ -1.04
LRTOMT-218ENST00000541614 USHBP1Q8N6Y0 703 aa8.56□□□□□ -1.04
LRTOMT-218ENST00000541614 RAPGEF4Q8WZA2 1011 aa8.56□□□□□ -1.04
LRTOMT-218ENST00000541614 CAMKK2Q96RR4 588 aa8.56□□□□□ -1.04
LRTOMT-218ENST00000541614 BCL11BQ9C0K0 894 aaPredicted RBP8.56□□□□□ -1.04
LRTOMT-218ENST00000541614 BTAF1O14981 1849 aa8.56□□□□□ -1.04
LRTOMT-218ENST00000541614 TATP17735 454 aaPredicted RBP8.55□□□□□ -1.04
LRTOMT-218ENST00000541614 EIF4A2Q14240 407 aaKnown RBP8.55□□□□□ -1.04
LRTOMT-218ENST00000541614 EZH2Q15910 746 aaKnown RBP8.55□□□□□ -1.04
LRTOMT-218ENST00000541614 ZCRB1Q8TBF4 217 aaKnown RBP8.55□□□□□ -1.04
LRTOMT-218ENST00000541614 PLEKHG2Q9H7P9 1386 aa8.55□□□□□ -1.04
LRTOMT-218ENST00000541614 PLSCR1O15162 318 aa8.54□□□□□ -1.04
LRTOMT-218ENST00000541614 PTF1AQ7RTS3 328 aa8.54□□□□□ -1.04
LRTOMT-218ENST00000541614 EYA1Q99502 592 aa8.54□□□□□ -1.04
LRTOMT-218ENST00000541614 IGSF1Q8N6C5 1336 aa8.54□□□□□ -1.04
LRTOMT-218ENST00000541614 DDX54Q8TDD1 881 aaKnown RBP8.53□□□□□ -1.04
LRTOMT-218ENST00000541614 PCDH11XQ9BZA7 1347 aa8.53□□□□□ -1.04
LRTOMT-218ENST00000541614 PCDH11YQ9BZA8 1340 aa8.53□□□□□ -1.04
LRTOMT-218ENST00000541614 KAT6BQ8WYB5 2073 aa8.52□□□□□ -1.05
LRTOMT-218ENST00000541614 TOGARAM1Q9Y4F4 1720 aa8.52□□□□□ -1.05
LRTOMT-218ENST00000541614 KCNQ2O43526 872 aa8.52□□□□□ -1.05
LRTOMT-218ENST00000541614 CC2D1BQ5T0F9 858 aaKnown RBP8.52□□□□□ -1.05
LRTOMT-218ENST00000541614 ACSBG1Q96GR2 724 aa8.52□□□□□ -1.05
LRTOMT-218ENST00000541614 LY75O60449 1722 aa8.51□□□□□ -1.05
LRTOMT-218ENST00000541614 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.51□□□□□ -1.05
LRTOMT-218ENST00000541614 ITGB4P16144 1822 aa8.51□□□□□ -1.05
LRTOMT-218ENST00000541614 SRCAPQ6ZRS2 3230 aa8.51□□□□□ -1.05
LRTOMT-218ENST00000541614 COL3A1P02461 1466 aaPredicted RBP8.51□□□□□ -1.05
LRTOMT-218ENST00000541614 LRP5O75197 1615 aa8.51□□□□□ -1.05
LRTOMT-218ENST00000541614 PAPPAQ13219 1627 aa8.51□□□□□ -1.05
LRTOMT-218ENST00000541614 KDRP35968 1356 aa8.5□□□□□ -1.05
LRTOMT-218ENST00000541614 CYP27B1O15528 508 aa8.5□□□□□ -1.05
LRTOMT-218ENST00000541614 IL13P35225 146 aa8.5□□□□□ -1.05
LRTOMT-218ENST00000541614 MTHFSP49914 203 aa8.5□□□□□ -1.05
LRTOMT-218ENST00000541614 TXNRD1Q16881 649 aa8.5□□□□□ -1.05
LRTOMT-218ENST00000541614 SPG7Q9UQ90 795 aa8.5□□□□□ -1.05
LRTOMT-218ENST00000541614 PSDA5PKW4 1024 aaPredicted RBP8.49□□□□□ -1.05
LRTOMT-218ENST00000541614 R3HDM1Q15032 1099 aaKnown RBP8.49□□□□□ -1.05
LRTOMT-218ENST00000541614 NKX1-1Q15270 411 aaPredicted RBP8.49□□□□□ -1.05
LRTOMT-218ENST00000541614 NBPF14Q5TI25 921 aa8.49□□□□□ -1.05
LRTOMT-218ENST00000541614 PROM2Q8N271 834 aa8.49□□□□□ -1.05
LRTOMT-218ENST00000541614 CASZ1Q86V15 1759 aa8.48□□□□□ -1.05
LRTOMT-218ENST00000541614 ZEB1P37275 1124 aaPredicted RBP8.48□□□□□ -1.05
LRTOMT-218ENST00000541614 PRIM1P49642 420 aaKnown RBP8.48□□□□□ -1.05
LRTOMT-218ENST00000541614 SYTL4Q96C24 671 aaPredicted RBP8.48□□□□□ -1.05
LRTOMT-218ENST00000541614 QSER1Q2KHR3 1735 aa8.47□□□□□ -1.05
LRTOMT-218ENST00000541614 DIAPH1O60610 1272 aaKnown RBP8.47□□□□□ -1.05
LRTOMT-218ENST00000541614 PHKG2P15735 406 aa8.47□□□□□ -1.05
LRTOMT-218ENST00000541614 AMOTQ4VCS5 1084 aa8.47□□□□□ -1.05
LRTOMT-218ENST00000541614 SULT6B1Q6IMI4 303 aa8.47□□□□□ -1.05
LRTOMT-218ENST00000541614 AEBP1Q8IUX7 1158 aa8.47□□□□□ -1.05
LRTOMT-218ENST00000541614 IFNL2Q8IZJ0 200 aa8.47□□□□□ -1.05
LRTOMT-218ENST00000541614 ANO8Q9HCE9 1232 aaPredicted RBP8.47□□□□□ -1.05
LRTOMT-218ENST00000541614 CNGB1Q14028 1251 aaPredicted RBP8.46□□□□□ -1.06
LRTOMT-218ENST00000541614 PLEKHO1Q53GL0 409 aaPredicted RBP8.46□□□□□ -1.06
LRTOMT-218ENST00000541614 SLC27A3Q5K4L6 730 aa8.46□□□□□ -1.06
LRTOMT-218ENST00000541614 C5P01031 1676 aa8.46□□□□□ -1.06
LRTOMT-218ENST00000541614 SCN11AQ9UI33 1791 aa8.45□□□□□ -1.06
LRTOMT-218ENST00000541614 VIRMAQ69YN4 1812 aaKnown RBP8.45□□□□□ -1.06
LRTOMT-218ENST00000541614 TAF1LQ8IZX4 1826 aa8.45□□□□□ -1.06
LRTOMT-218ENST00000541614 HSP90AB1P08238 724 aaKnown RBP8.45□□□□□ -1.06
LRTOMT-218ENST00000541614 PPP2R1AP30153 589 aa8.45□□□□□ -1.06
LRTOMT-218ENST00000541614 MPRIPQ6WCQ1 1025 aa8.45□□□□□ -1.06
LRTOMT-218ENST00000541614 CFAP53Q96M91 514 aa8.45□□□□□ -1.06
LRTOMT-218ENST00000541614 LRRC4BQ9NT99 713 aa8.45□□□□□ -1.06
LRTOMT-218ENST00000541614 STK32BQ9NY57 414 aa8.45□□□□□ -1.06
LRTOMT-218ENST00000541614 TUBGCP6Q96RT7 1819 aa8.45□□□□□ -1.06
LRTOMT-218ENST00000541614 KDM6AO15550 1401 aaPredicted RBP8.45□□□□□ -1.06
LRTOMT-218ENST00000541614 ADAMTS7Q9UKP4 1686 aa8.44□□□□□ -1.06
LRTOMT-218ENST00000541614 SLC15A2Q16348 729 aa8.44□□□□□ -1.06
LRTOMT-218ENST00000541614 ZNF530Q6P9A1 599 aaPredicted RBP8.44□□□□□ -1.06
LRTOMT-218ENST00000541614 DCAF5Q96JK2 942 aa8.44□□□□□ -1.06
LRTOMT-218ENST00000541614 PALLDQ8WX93 1383 aa8.44□□□□□ -1.06
LRTOMT-218ENST00000541614 ZNF831Q5JPB2 1677 aa8.43□□□□□ -1.06
LRTOMT-218ENST00000541614 ERVV-2B6SEH9 535 aa8.43□□□□□ -1.06
LRTOMT-218ENST00000541614 HMOX1P09601 288 aa8.43□□□□□ -1.06
LRTOMT-218ENST00000541614 C1orf141Q5JVX7 400 aa8.43□□□□□ -1.06
LRTOMT-218ENST00000541614 PIGBQ92521 554 aa8.43□□□□□ -1.06
LRTOMT-218ENST00000541614 SMARCC1Q92922 1105 aaPredicted RBP8.43□□□□□ -1.06
LRTOMT-218ENST00000541614 TMOD3Q9NYL9 352 aa8.43□□□□□ -1.06
LRTOMT-218ENST00000541614 CCNL1Q9UK58 526 aaPredicted RBP8.43□□□□□ -1.06
LRTOMT-218ENST00000541614 U2SURPO15042 1029 aaKnown RBP8.42□□□□□ -1.06
LRTOMT-218ENST00000541614 HMGB2P26583 209 aaKnown RBP8.42□□□□□ -1.06
LRTOMT-218ENST00000541614 DDX10Q13206 875 aaKnown RBP8.42□□□□□ -1.06
LRTOMT-218ENST00000541614 ZNF827Q17R98 1081 aa8.42□□□□□ -1.06
LRTOMT-218ENST00000541614 AKAP4Q5JQC9 854 aa8.42□□□□□ -1.06
LRTOMT-218ENST00000541614 AKT1S1Q96B36 256 aa8.42□□□□□ -1.06
LRTOMT-218ENST00000541614 MRC1P22897 1456 aa8.42□□□□□ -1.06
LRTOMT-218ENST00000541614 C4BP0C0L5 1744 aa8.42□□□□□ -1.06
LRTOMT-218ENST00000541614 COL24A1Q17RW2 1714 aa8.41□□□□□ -1.06
LRTOMT-218ENST00000541614 CICQ96RK0 1608 aaPredicted RBP8.41□□□□□ -1.06
LRTOMT-218ENST00000541614 RALBP1Q15311 655 aa8.41□□□□□ -1.06
LRTOMT-218ENST00000541614 NUDCQ9Y266 331 aa8.41□□□□□ -1.06
LRTOMT-218ENST00000541614 COL5A3P25940 1745 aaPredicted RBP8.4□□□□□ -1.06
LRTOMT-218ENST00000541614 KCNQ4P56696 695 aa8.4□□□□□ -1.06
LRTOMT-218ENST00000541614 CABP4P57796 275 aa8.4□□□□□ -1.06
LRTOMT-218ENST00000541614 MTHFSDQ2M296 383 aaKnown RBP8.4□□□□□ -1.06
LRTOMT-218ENST00000541614 PDGFDQ9GZP0 370 aaPredicted RBP8.4□□□□□ -1.06
LRTOMT-218ENST00000541614 RSPH6AQ9H0K4 717 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms