RNA–Protein interactions for RNA: ENST00000541496.1

SPARCL1-209, Transcript of SPARC like 1, humanhuman

TSL 2

Gene SPARCL1, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-209ENST00000541496 ZNF687Q8N1G0 1237 aa6.85□□□□□ -1.31
SPARCL1-209ENST00000541496 POLR3GLQ9BT43 218 aa6.85□□□□□ -1.31
SPARCL1-209ENST00000541496 TSHZ2Q9NRE2 1034 aa6.85□□□□□ -1.31
SPARCL1-209ENST00000541496 SBNO1A3KN83 1393 aa6.84□□□□□ -1.31
SPARCL1-209ENST00000541496 KTN1Q86UP2 1357 aaKnown RBP6.84□□□□□ -1.31
SPARCL1-209ENST00000541496 USP32Q8NFA0 1604 aa6.84□□□□□ -1.31
SPARCL1-209ENST00000541496 TTC21AQ8NDW8 1320 aa6.84□□□□□ -1.31
SPARCL1-209ENST00000541496 MAP3K9P80192 1104 aa6.84□□□□□ -1.31
SPARCL1-209ENST00000541496 DDX10Q13206 875 aaKnown RBP6.84□□□□□ -1.31
SPARCL1-209ENST00000541496 E2F4Q16254 413 aa6.84□□□□□ -1.31
SPARCL1-209ENST00000541496 UPF1Q92900 1129 aaKnown RBP eCLIP6.84□□□□□ -1.31
SPARCL1-209ENST00000541496 KNSTRNQ9Y448 316 aa6.84□□□□□ -1.31
SPARCL1-209ENST00000541496 CGNL1Q0VF96 1302 aa6.83□□□□□ -1.32
SPARCL1-209ENST00000541496 TTC21BQ7Z4L5 1316 aa6.83□□□□□ -1.32
SPARCL1-209ENST00000541496 KRT28Q7Z3Y7 464 aa6.83□□□□□ -1.32
SPARCL1-209ENST00000541496 PXDNQ92626 1479 aa6.83□□□□□ -1.32
SPARCL1-209ENST00000541496 TOPAZ1Q8N9V7 1692 aa6.83□□□□□ -1.32
SPARCL1-209ENST00000541496 NSD3Q9BZ95 1437 aa6.83□□□□□ -1.32
SPARCL1-209ENST00000541496 NSD2O96028 1365 aa6.82□□□□□ -1.32
SPARCL1-209ENST00000541496 USP31Q70CQ4 1352 aa6.82□□□□□ -1.32
SPARCL1-209ENST00000541496 SPATA31A3Q5VYP0 1347 aa6.82□□□□□ -1.32
SPARCL1-209ENST00000541496 FYB1O15117 783 aa6.82□□□□□ -1.32
SPARCL1-209ENST00000541496 PIP4K2BP78356 416 aa6.82□□□□□ -1.32
SPARCL1-209ENST00000541496 ANKRD13DQ6ZTN6 518 aa6.82□□□□□ -1.32
SPARCL1-209ENST00000541496 EMILIN3Q9NT22 766 aa6.82□□□□□ -1.32
SPARCL1-209ENST00000541496 ARIH1Q9Y4X5 557 aaPredicted RBP6.82□□□□□ -1.32
SPARCL1-209ENST00000541496 XIRP1Q702N8 1843 aaKnown RBP6.82□□□□□ -1.32
SPARCL1-209ENST00000541496 AHDC1Q5TGY3 1603 aaPredicted RBP6.82□□□□□ -1.32
SPARCL1-209ENST00000541496 ARHGEF10O15013 1369 aa6.82□□□□□ -1.32
SPARCL1-209ENST00000541496 KIF1AQ12756 1690 aa6.81□□□□□ -1.32
SPARCL1-209ENST00000541496 FBXO41Q8TF61 875 aa6.81□□□□□ -1.32
SPARCL1-209ENST00000541496 DDX17Q92841 729 aaKnown RBP6.81□□□□□ -1.32
SPARCL1-209ENST00000541496 RNF166Q96A37 237 aaPredicted RBP6.81□□□□□ -1.32
SPARCL1-209ENST00000541496 LRRC59Q96AG4 307 aaKnown RBP6.81□□□□□ -1.32
SPARCL1-209ENST00000541496 LHX6Q9UPM6 363 aa6.81□□□□□ -1.32
SPARCL1-209ENST00000541496 TNS3Q68CZ2 1445 aa6.81□□□□□ -1.32
SPARCL1-209ENST00000541496 USP19O94966 1318 aa6.8□□□□□ -1.32
SPARCL1-209ENST00000541496 OVOS2A0A0J9YW53 1432 aa6.8□□□□□ -1.32
SPARCL1-209ENST00000541496 EVI5O60447 810 aa6.8□□□□□ -1.32
SPARCL1-209ENST00000541496 HAP1P54257 671 aaPredicted RBP6.8□□□□□ -1.32
SPARCL1-209ENST00000541496 XPCQ01831 940 aaPredicted RBP6.8□□□□□ -1.32
SPARCL1-209ENST00000541496 PPP4R3BQ5MIZ7 849 aa6.8□□□□□ -1.32
SPARCL1-209ENST00000541496 OVOS2Q6IE36 1432 aa6.8□□□□□ -1.32
SPARCL1-209ENST00000541496 NLRP13Q86W25 1043 aa6.8□□□□□ -1.32
SPARCL1-209ENST00000541496 NME9Q86XW9 330 aa6.8□□□□□ -1.32
SPARCL1-209ENST00000541496 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.8□□□□□ -1.32
SPARCL1-209ENST00000541496 ANO8Q9HCE9 1232 aaPredicted RBP6.8□□□□□ -1.32
SPARCL1-209ENST00000541496 MYOM1P52179 1685 aa6.8□□□□□ -1.32
SPARCL1-209ENST00000541496 SPDYE16A6NNV3 312 aaPredicted RBP6.79□□□□□ -1.32
SPARCL1-209ENST00000541496 PBX2P40425 430 aa6.79□□□□□ -1.32
SPARCL1-209ENST00000541496 ABTB2Q8N961 1025 aa6.79□□□□□ -1.32
SPARCL1-209ENST00000541496 COG3Q96JB2 828 aa6.79□□□□□ -1.32
SPARCL1-209ENST00000541496 AATKQ6ZMQ8 1374 aa6.79□□□□□ -1.32
SPARCL1-209ENST00000541496 RALBP1Q15311 655 aa6.78□□□□□ -1.32
SPARCL1-209ENST00000541496 GGNBP2Q9H3C7 697 aa6.78□□□□□ -1.32
SPARCL1-209ENST00000541496 PNPLA6Q8IY17 1366 aa6.78□□□□□ -1.32
SPARCL1-209ENST00000541496 PARD3Q8TEW0 1356 aa6.78□□□□□ -1.32
SPARCL1-209ENST00000541496 JCADQ9P266 1359 aa6.78□□□□□ -1.32
SPARCL1-209ENST00000541496 ITSN1Q15811 1721 aa6.78□□□□□ -1.32
SPARCL1-209ENST00000541496 ROBO1Q9Y6N7 1651 aa6.77□□□□□ -1.32
SPARCL1-209ENST00000541496 DPYSL4O14531 572 aa6.77□□□□□ -1.33
SPARCL1-209ENST00000541496 GCP02774 474 aa6.77□□□□□ -1.33
SPARCL1-209ENST00000541496 HSPA1LP34931 641 aa6.77□□□□□ -1.33
SPARCL1-209ENST00000541496 CC2D1BQ5T0F9 858 aaKnown RBP6.77□□□□□ -1.33
SPARCL1-209ENST00000541496 DIEXFQ68CQ4 756 aaKnown RBP6.77□□□□□ -1.33
SPARCL1-209ENST00000541496 MORC1Q86VD1 984 aa6.77□□□□□ -1.33
SPARCL1-209ENST00000541496 KCNH5Q8NCM2 988 aa6.77□□□□□ -1.33
SPARCL1-209ENST00000541496 PRKRIP1Q9H875 184 aaPredicted RBP6.77□□□□□ -1.33
SPARCL1-209ENST00000541496 MED1Q15648 1581 aaPredicted RBP6.77□□□□□ -1.33
SPARCL1-209ENST00000541496 NRKQ7Z2Y5 1582 aa6.77□□□□□ -1.33
SPARCL1-209ENST00000541496 SPATA31A6Q5VVP1 1343 aa6.76□□□□□ -1.33
SPARCL1-209ENST00000541496 NHSL1Q5SYE7 1610 aa6.76□□□□□ -1.33
SPARCL1-209ENST00000541496 ANP32CO43423 234 aa6.76□□□□□ -1.33
SPARCL1-209ENST00000541496 LSM11P83369 360 aaKnown RBP eCLIP6.76□□□□□ -1.33
SPARCL1-209ENST00000541496 PDIA6Q15084 440 aa6.76□□□□□ -1.33
SPARCL1-209ENST00000541496 LMOD2Q6P5Q4 547 aa6.76□□□□□ -1.33
SPARCL1-209ENST00000541496 CPDO75976 1380 aa6.76□□□□□ -1.33
SPARCL1-209ENST00000541496 KIF24Q5T7B8 1368 aa6.76□□□□□ -1.33
SPARCL1-209ENST00000541496 COL16A1Q07092 1604 aaPredicted RBP6.76□□□□□ -1.33
SPARCL1-209ENST00000541496 SLIT3O75094 1523 aa6.76□□□□□ -1.33
SPARCL1-209ENST00000541496 INSRP06213 1382 aa6.75□□□□□ -1.33
SPARCL1-209ENST00000541496 PTGER2P43116 358 aa6.75□□□□□ -1.33
SPARCL1-209ENST00000541496 FOSBP53539 338 aa6.75□□□□□ -1.33
SPARCL1-209ENST00000541496 NUTM2GQ5VZR2 741 aa6.75□□□□□ -1.33
SPARCL1-209ENST00000541496 ARHGEF25Q86VW2 580 aa6.75□□□□□ -1.33
SPARCL1-209ENST00000541496 VSIG10Q8N0Z9 540 aa6.75□□□□□ -1.33
SPARCL1-209ENST00000541496 ARHGEF1Q92888 912 aaKnown RBP6.75□□□□□ -1.33
SPARCL1-209ENST00000541496 AXIN2Q9Y2T1 843 aa6.75□□□□□ -1.33
SPARCL1-209ENST00000541496 MON2Q7Z3U7 1717 aa6.75□□□□□ -1.33
SPARCL1-209ENST00000541496 TRPM3Q9HCF6 1732 aaPredicted RBP6.75□□□□□ -1.33
SPARCL1-209ENST00000541496 SMG6Q86US8 1419 aaKnown RBP6.75□□□□□ -1.33
SPARCL1-209ENST00000541496 MYBBP1AQ9BQG0 1328 aaKnown RBP6.75□□□□□ -1.33
SPARCL1-209ENST00000541496 PHF14O94880 888 aa6.74□□□□□ -1.33
SPARCL1-209ENST00000541496 PPP2R1AP30153 589 aa6.74□□□□□ -1.33
SPARCL1-209ENST00000541496 ZNF454Q8N9F8 522 aa6.74□□□□□ -1.33
SPARCL1-209ENST00000541496 FBXW7Q969H0 707 aa6.74□□□□□ -1.33
SPARCL1-209ENST00000541496 POLKQ9UBT6 870 aa6.74□□□□□ -1.33
SPARCL1-209ENST00000541496 MAP3K19Q56UN5 1328 aa6.74□□□□□ -1.33
SPARCL1-209ENST00000541496 RTL1A6NKG5 1358 aa6.73□□□□□ -1.33
SPARCL1-209ENST00000541496 AKAP12Q02952 1782 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms