RNA–Protein interactions for RNA: ENST00000541359.1

LINC00943-207, long intergenic non-protein coding RNA 943, humanhuman

TSL 4

Gene LINC00943, Length 676 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-207ENST00000541359 TATP17735 454 aaPredicted RBP29■■■□□ 2.23
LINC00943-207ENST00000541359 ZCRB1Q8TBF4 217 aaKnown RBP28.99■■■□□ 2.23
LINC00943-207ENST00000541359 KDRP35968 1356 aa28.99■■■□□ 2.23
LINC00943-207ENST00000541359 TRIM37O94972 964 aa28.97■■■□□ 2.23
LINC00943-207ENST00000541359 AEBP1Q8IUX7 1158 aa28.97■■■□□ 2.23
LINC00943-207ENST00000541359 NHSQ6T4R5 1651 aa28.96■■■□□ 2.23
LINC00943-207ENST00000541359 PLEKHG2Q9H7P9 1386 aa28.96■■■□□ 2.23
LINC00943-207ENST00000541359 DIAPH1O60610 1272 aaKnown RBP28.95■■■□□ 2.22
LINC00943-207ENST00000541359 PTF1AQ7RTS3 328 aa28.94■■■□□ 2.22
LINC00943-207ENST00000541359 DDX54Q8TDD1 881 aaKnown RBP28.94■■■□□ 2.22
LINC00943-207ENST00000541359 DEFB132Q7Z7B7 95 aa28.93■■■□□ 2.22
LINC00943-207ENST00000541359 DOT1LQ8TEK3 1739 aa28.91■■■□□ 2.22
LINC00943-207ENST00000541359 CYP27B1O15528 508 aa28.91■■■□□ 2.22
LINC00943-207ENST00000541359 RALBP1Q15311 655 aa28.91■■■□□ 2.22
LINC00943-207ENST00000541359 SULT6B1Q6IMI4 303 aa28.91■■■□□ 2.22
LINC00943-207ENST00000541359 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.9■■■□□ 2.22
LINC00943-207ENST00000541359 PCDH11XQ9BZA7 1347 aa28.9■■■□□ 2.22
LINC00943-207ENST00000541359 PCDH11YQ9BZA8 1340 aa28.9■■■□□ 2.22
LINC00943-207ENST00000541359 SF3B2Q13435 895 aaKnown RBP28.89■■■□□ 2.22
LINC00943-207ENST00000541359 BCL11BQ9C0K0 894 aaPredicted RBP28.88■■■□□ 2.21
LINC00943-207ENST00000541359 TOGARAM1Q9Y4F4 1720 aa28.88■■■□□ 2.21
LINC00943-207ENST00000541359 KCNQ2O43526 872 aa28.87■■■□□ 2.21
LINC00943-207ENST00000541359 CFAP53Q96M91 514 aa28.87■■■□□ 2.21
LINC00943-207ENST00000541359 ACSBG1Q96GR2 724 aa28.86■■■□□ 2.21
LINC00943-207ENST00000541359 SPG7Q9UQ90 795 aa28.86■■■□□ 2.21
LINC00943-207ENST00000541359 RGPD3A6NKT7 1758 aaPredicted RBP28.85■■■□□ 2.21
LINC00943-207ENST00000541359 RGPD4Q7Z3J3 1758 aa28.85■■■□□ 2.21
LINC00943-207ENST00000541359 HMOX1P09601 288 aa28.85■■■□□ 2.21
LINC00943-207ENST00000541359 BAG6P46379 1132 aa28.85■■■□□ 2.21
LINC00943-207ENST00000541359 APBA3O96018 575 aa28.84■■■□□ 2.21
LINC00943-207ENST00000541359 BTAF1O14981 1849 aa28.84■■■□□ 2.21
LINC00943-207ENST00000541359 EN1Q05925 392 aaPredicted RBP28.83■■■□□ 2.21
LINC00943-207ENST00000541359 PRKRIP1Q9H875 184 aaPredicted RBP28.83■■■□□ 2.21
LINC00943-207ENST00000541359 RREB1Q92766 1687 aa28.83■■■□□ 2.21
LINC00943-207ENST00000541359 NKX1-1Q15270 411 aaPredicted RBP28.82■■■□□ 2.2
LINC00943-207ENST00000541359 CAMKK2Q96RR4 588 aa28.82■■■□□ 2.2
LINC00943-207ENST00000541359 MYBBP1AQ9BQG0 1328 aaKnown RBP28.81■■■□□ 2.2
LINC00943-207ENST00000541359 PHKG2P15735 406 aa28.81■■■□□ 2.2
LINC00943-207ENST00000541359 U2SURPO15042 1029 aaKnown RBP28.8■■■□□ 2.2
LINC00943-207ENST00000541359 EZH2Q15910 746 aaKnown RBP28.79■■■□□ 2.2
LINC00943-207ENST00000541359 PLEKHO1Q53GL0 409 aaPredicted RBP28.79■■■□□ 2.2
LINC00943-207ENST00000541359 AMOTQ4VCS5 1084 aa28.78■■■□□ 2.2
LINC00943-207ENST00000541359 PRIM1P49642 420 aaKnown RBP28.77■■■□□ 2.2
LINC00943-207ENST00000541359 IFNL2Q8IZJ0 200 aa28.77■■■□□ 2.2
LINC00943-207ENST00000541359 ITGB4P16144 1822 aa28.77■■■□□ 2.2
LINC00943-207ENST00000541359 NUP188Q5SRE5 1749 aa28.77■■■□□ 2.2
LINC00943-207ENST00000541359 KAT6BQ8WYB5 2073 aa28.76■■■□□ 2.19
LINC00943-207ENST00000541359 PLSCR1O15162 318 aa28.76■■■□□ 2.19
LINC00943-207ENST00000541359 ZNF530Q6P9A1 599 aaPredicted RBP28.75■■■□□ 2.19
LINC00943-207ENST00000541359 RSPH6AQ9H0K4 717 aa28.75■■■□□ 2.19
LINC00943-207ENST00000541359 NUDCQ9Y266 331 aa28.75■■■□□ 2.19
LINC00943-207ENST00000541359 KDM6AO15550 1401 aaPredicted RBP28.74■■■□□ 2.19
LINC00943-207ENST00000541359 U2AF1L5P0DN76 240 aaPredicted RBP28.71■■■□□ 2.19
LINC00943-207ENST00000541359 U2AF1Q01081 240 aaKnown RBP eCLIP28.71■■■□□ 2.19
LINC00943-207ENST00000541359 PROM2Q8N271 834 aa28.71■■■□□ 2.19
LINC00943-207ENST00000541359 MTHFSDQ2M296 383 aaKnown RBP28.7■■■□□ 2.18
LINC00943-207ENST00000541359 SYTL4Q96C24 671 aaPredicted RBP28.7■■■□□ 2.18
LINC00943-207ENST00000541359 ADAMTS7Q9UKP4 1686 aa28.7■■■□□ 2.18
LINC00943-207ENST00000541359 PRKAR2BP31323 418 aa28.69■■■□□ 2.18
LINC00943-207ENST00000541359 LY75O60449 1722 aa28.69■■■□□ 2.18
LINC00943-207ENST00000541359 SCN11AQ9UI33 1791 aa28.68■■■□□ 2.18
LINC00943-207ENST00000541359 FCHSD2O94868 740 aa28.67■■■□□ 2.18
LINC00943-207ENST00000541359 DCAF5Q96JK2 942 aa28.67■■■□□ 2.18
LINC00943-207ENST00000541359 PHACTR3Q96KR7 559 aa28.67■■■□□ 2.18
LINC00943-207ENST00000541359 VIRMAQ69YN4 1812 aaKnown RBP28.66■■■□□ 2.18
LINC00943-207ENST00000541359 HSP90AB1P08238 724 aaKnown RBP28.66■■■□□ 2.18
LINC00943-207ENST00000541359 AKAP4Q5JQC9 854 aa28.65■■■□□ 2.18
LINC00943-207ENST00000541359 C1orf141Q5JVX7 400 aa28.65■■■□□ 2.18
LINC00943-207ENST00000541359 TXNRD1Q16881 649 aa28.64■■■□□ 2.18
LINC00943-207ENST00000541359 PIGBQ92521 554 aa28.64■■■□□ 2.18
LINC00943-207ENST00000541359 PAPPAQ13219 1627 aa28.63■■■□□ 2.17
LINC00943-207ENST00000541359 MPRIPQ6WCQ1 1025 aa28.63■■■□□ 2.17
LINC00943-207ENST00000541359 MRC1P22897 1456 aa28.61■■■□□ 2.17
LINC00943-207ENST00000541359 ERVV-2B6SEH9 535 aa28.61■■■□□ 2.17
LINC00943-207ENST00000541359 PLEKHF1Q96S99 279 aa28.61■■■□□ 2.17
LINC00943-207ENST00000541359 GAS2L2Q8NHY3 880 aa28.59■■■□□ 2.17
LINC00943-207ENST00000541359 TMOD3Q9NYL9 352 aa28.59■■■□□ 2.17
LINC00943-207ENST00000541359 LGR6Q9HBX8 967 aa28.58■■■□□ 2.17
LINC00943-207ENST00000541359 LRRC4BQ9NT99 713 aa28.58■■■□□ 2.17
LINC00943-207ENST00000541359 MAP3K5Q99683 1374 aa28.58■■■□□ 2.17
LINC00943-207ENST00000541359 CCDC184Q52MB2 194 aa28.57■■■□□ 2.16
LINC00943-207ENST00000541359 RNMTO43148 476 aaKnown RBP28.56■■■□□ 2.16
LINC00943-207ENST00000541359 PALLDQ8WX93 1383 aa28.56■■■□□ 2.16
LINC00943-207ENST00000541359 ANO8Q9HCE9 1232 aaPredicted RBP28.56■■■□□ 2.16
LINC00943-207ENST00000541359 ANP32CO43423 234 aa28.55■■■□□ 2.16
LINC00943-207ENST00000541359 ASAP1Q9ULH1 1129 aa28.54■■■□□ 2.16
LINC00943-207ENST00000541359 SIPA1L3O60292 1781 aaPredicted RBP28.53■■■□□ 2.16
LINC00943-207ENST00000541359 CABP4P57796 275 aa28.53■■■□□ 2.16
LINC00943-207ENST00000541359 SLC27A3Q5K4L6 730 aa28.53■■■□□ 2.16
LINC00943-207ENST00000541359 ATG3Q9NT62 314 aa28.53■■■□□ 2.16
LINC00943-207ENST00000541359 DLG5Q8TDM6 1919 aa28.52■■■□□ 2.16
LINC00943-207ENST00000541359 GNAT3A8MTJ3 354 aa28.52■■■□□ 2.16
LINC00943-207ENST00000541359 IL17REQ8NFR9 667 aa28.52■■■□□ 2.16
LINC00943-207ENST00000541359 KCNQ4P56696 695 aa28.51■■■□□ 2.15
LINC00943-207ENST00000541359 NFATC2IPQ8NCF5 419 aa28.51■■■□□ 2.15
LINC00943-207ENST00000541359 SMARCC1Q92922 1105 aaPredicted RBP28.51■■■□□ 2.15
LINC00943-207ENST00000541359 SLC52A2Q9HAB3 445 aa28.51■■■□□ 2.15
LINC00943-207ENST00000541359 CEMIPQ8WUJ3 1361 aa28.5■■■□□ 2.15
LINC00943-207ENST00000541359 TAF1LQ8IZX4 1826 aa28.5■■■□□ 2.15
LINC00943-207ENST00000541359 C5P01031 1676 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms