RNA–Protein interactions for RNA: ENST00000541329.1

NPIPB4-213, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 432 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-213ENST00000541329 LMOD3Q0VAK6 560 aa9.8□□□□□ -0.84
NPIPB4-213ENST00000541329 ANKRD24Q8TF21 1146 aa9.8□□□□□ -0.84
NPIPB4-213ENST00000541329 LRRC59Q96AG4 307 aaKnown RBP9.8□□□□□ -0.84
NPIPB4-213ENST00000541329 USP35Q9P2H5 1018 aa9.8□□□□□ -0.84
NPIPB4-213ENST00000541329 ZBTB47Q9UFB7 747 aaPredicted RBP9.8□□□□□ -0.84
NPIPB4-213ENST00000541329 IL16Q14005 1332 aa9.8□□□□□ -0.84
NPIPB4-213ENST00000541329 EXOSC9Q06265 439 aaKnown RBP9.79□□□□□ -0.84
NPIPB4-213ENST00000541329 MTHFSDQ2M296 383 aaKnown RBP9.79□□□□□ -0.84
NPIPB4-213ENST00000541329 NBPF6Q5VWK0 638 aa9.79□□□□□ -0.84
NPIPB4-213ENST00000541329 MCM10Q7L590 875 aa9.79□□□□□ -0.84
NPIPB4-213ENST00000541329 EXOC6Q8TAG9 804 aa9.79□□□□□ -0.84
NPIPB4-213ENST00000541329 NBPF4Q96M43 638 aa9.79□□□□□ -0.84
NPIPB4-213ENST00000541329 KDRP35968 1356 aa9.78□□□□□ -0.84
NPIPB4-213ENST00000541329 CAMTA1Q9Y6Y1 1673 aa9.78□□□□□ -0.84
NPIPB4-213ENST00000541329 PRKCSHP14314 528 aaPredicted RBP9.78□□□□□ -0.84
NPIPB4-213ENST00000541329 CANXP27824 592 aaKnown RBP9.78□□□□□ -0.84
NPIPB4-213ENST00000541329 HAP1P54257 671 aaPredicted RBP9.78□□□□□ -0.84
NPIPB4-213ENST00000541329 CALD1Q05682 793 aaKnown RBP9.78□□□□□ -0.84
NPIPB4-213ENST00000541329 CHRNA2Q15822 529 aa9.78□□□□□ -0.84
NPIPB4-213ENST00000541329 C20orf194Q5TEA3 1177 aa9.78□□□□□ -0.84
NPIPB4-213ENST00000541329 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.78□□□□□ -0.84
NPIPB4-213ENST00000541329 CRBNQ96SW2 442 aa9.78□□□□□ -0.84
NPIPB4-213ENST00000541329 BCL2L13Q9BXK5 485 aa9.78□□□□□ -0.84
NPIPB4-213ENST00000541329 AXIN2Q9Y2T1 843 aa9.78□□□□□ -0.84
NPIPB4-213ENST00000541329 SOS2Q07890 1332 aaPredicted RBP9.78□□□□□ -0.84
NPIPB4-213ENST00000541329 FAM208AQ9UK61 1670 aaKnown RBP9.77□□□□□ -0.84
NPIPB4-213ENST00000541329 PPP4R3CPQ6ZMV5 832 aa9.77□□□□□ -0.85
NPIPB4-213ENST00000541329 FRAT1Q92837 279 aaPredicted RBP9.77□□□□□ -0.85
NPIPB4-213ENST00000541329 CCDC136Q96JN2 1154 aa9.77□□□□□ -0.85
NPIPB4-213ENST00000541329 KIAA0232Q92628 1395 aa9.76□□□□□ -0.85
NPIPB4-213ENST00000541329 JCADQ9P266 1359 aa9.76□□□□□ -0.85
NPIPB4-213ENST00000541329 PHLPP1O60346 1717 aa9.76□□□□□ -0.85
NPIPB4-213ENST00000541329 TCERG1O14776 1098 aaKnown RBP9.76□□□□□ -0.85
NPIPB4-213ENST00000541329 RARSP54136 660 aaKnown RBP9.76□□□□□ -0.85
NPIPB4-213ENST00000541329 GNAI1P63096 354 aa9.76□□□□□ -0.85
NPIPB4-213ENST00000541329 GAS2L2Q8NHY3 880 aa9.76□□□□□ -0.85
NPIPB4-213ENST00000541329 RTF1Q92541 710 aaKnown RBP9.76□□□□□ -0.85
NPIPB4-213ENST00000541329 IFT57Q9NWB7 429 aa9.76□□□□□ -0.85
NPIPB4-213ENST00000541329 LMO7Q8WWI1 1683 aa9.76□□□□□ -0.85
NPIPB4-213ENST00000541329 LRRC37A3O60309 1634 aa9.75□□□□□ -0.85
NPIPB4-213ENST00000541329 CSB-PGBD3P0DP91 1061 aa9.75□□□□□ -0.85
NPIPB4-213ENST00000541329 MS4A1P11836 297 aa9.75□□□□□ -0.85
NPIPB4-213ENST00000541329 MBIPQ9NS73 344 aa9.75□□□□□ -0.85
NPIPB4-213ENST00000541329 NBR1Q14596 966 aa9.74□□□□□ -0.85
NPIPB4-213ENST00000541329 NLRP2Q9NX02 1062 aa9.74□□□□□ -0.85
NPIPB4-213ENST00000541329 LRP5O75197 1615 aa9.74□□□□□ -0.85
NPIPB4-213ENST00000541329 MAP3K5Q99683 1374 aa9.74□□□□□ -0.85
NPIPB4-213ENST00000541329 ABCC6O95255 1503 aa9.73□□□□□ -0.85
NPIPB4-213ENST00000541329 GNAT3A8MTJ3 354 aa9.73□□□□□ -0.85
NPIPB4-213ENST00000541329 ELL2O00472 640 aaPredicted RBP9.73□□□□□ -0.85
NPIPB4-213ENST00000541329 ZNF853P0CG23 659 aa9.73□□□□□ -0.85
NPIPB4-213ENST00000541329 CFAP44Q96MT7 982 aa9.73□□□□□ -0.85
NPIPB4-213ENST00000541329 PRDM11Q9NQV5 511 aa9.73□□□□□ -0.85
NPIPB4-213ENST00000541329 SMC4Q9NTJ3 1288 aa9.73□□□□□ -0.85
NPIPB4-213ENST00000541329 MIS18AQ9NYP9 233 aa9.73□□□□□ -0.85
NPIPB4-213ENST00000541329 TNNQ9UQP3 1299 aa9.73□□□□□ -0.85
NPIPB4-213ENST00000541329 LRP6O75581 1613 aa9.73□□□□□ -0.85
NPIPB4-213ENST00000541329 AHDC1Q5TGY3 1603 aaPredicted RBP9.73□□□□□ -0.85
NPIPB4-213ENST00000541329 ERBB3P21860 1342 aa9.73□□□□□ -0.85
NPIPB4-213ENST00000541329 CRB1P82279 1406 aa9.73□□□□□ -0.85
NPIPB4-213ENST00000541329 CT47B1P0C2W7 299 aaPredicted RBP9.72□□□□□ -0.85
NPIPB4-213ENST00000541329 PLEKHO1Q53GL0 409 aaPredicted RBP9.72□□□□□ -0.85
NPIPB4-213ENST00000541329 MEX3CQ5U5Q3 659 aaKnown RBP9.72□□□□□ -0.85
NPIPB4-213ENST00000541329 ZNF530Q6P9A1 599 aaPredicted RBP9.72□□□□□ -0.85
NPIPB4-213ENST00000541329 TSPYL6Q8N831 410 aa9.72□□□□□ -0.85
NPIPB4-213ENST00000541329 PANK1Q8TE04 598 aa9.72□□□□□ -0.85
NPIPB4-213ENST00000541329 SSH1Q8WYL5 1049 aa9.72□□□□□ -0.85
NPIPB4-213ENST00000541329 CPDO75976 1380 aa9.72□□□□□ -0.85
NPIPB4-213ENST00000541329 RGS12O14924 1447 aa9.72□□□□□ -0.85
NPIPB4-213ENST00000541329 NCAPD2Q15021 1401 aa9.72□□□□□ -0.85
NPIPB4-213ENST00000541329 PARP4Q9UKK3 1724 aaKnown RBP9.71□□□□□ -0.85
NPIPB4-213ENST00000541329 YY1P25490 414 aa9.71□□□□□ -0.86
NPIPB4-213ENST00000541329 C8orf58Q8NAV2 365 aa9.71□□□□□ -0.86
NPIPB4-213ENST00000541329 TSPYL4Q9UJ04 414 aa9.71□□□□□ -0.86
NPIPB4-213ENST00000541329 SPATA31A6Q5VVP1 1343 aa9.71□□□□□ -0.86
NPIPB4-213ENST00000541329 COL22A1Q8NFW1 1626 aaPredicted RBP9.71□□□□□ -0.86
NPIPB4-213ENST00000541329 NUTM2BA6NNL0 878 aaPredicted RBP9.7□□□□□ -0.86
NPIPB4-213ENST00000541329 NUTM2EB1AL46 878 aaPredicted RBP9.7□□□□□ -0.86
NPIPB4-213ENST00000541329 HTATSF1O43719 755 aaKnown RBP9.7□□□□□ -0.86
NPIPB4-213ENST00000541329 VAMP4O75379 141 aa9.7□□□□□ -0.86
NPIPB4-213ENST00000541329 TATP17735 454 aaPredicted RBP9.7□□□□□ -0.86
NPIPB4-213ENST00000541329 KRT24Q2M2I5 525 aa9.7□□□□□ -0.86
NPIPB4-213ENST00000541329 TWISTNBQ3B726 338 aaPredicted RBP9.7□□□□□ -0.86
NPIPB4-213ENST00000541329 NUTM2AQ8IVF1 878 aaPredicted RBP9.7□□□□□ -0.86
NPIPB4-213ENST00000541329 IL17REQ8NFR9 667 aa9.7□□□□□ -0.86
NPIPB4-213ENST00000541329 CLUAP1Q96AJ1 413 aa9.7□□□□□ -0.86
NPIPB4-213ENST00000541329 STRN4Q9NRL3 753 aa9.7□□□□□ -0.86
NPIPB4-213ENST00000541329 COG6Q9Y2V7 657 aa9.7□□□□□ -0.86
NPIPB4-213ENST00000541329 COL16A1Q07092 1604 aaPredicted RBP9.7□□□□□ -0.86
NPIPB4-213ENST00000541329 KDM3BQ7LBC6 1761 aa9.7□□□□□ -0.86
NPIPB4-213ENST00000541329 SCN11AQ9UI33 1791 aa9.7□□□□□ -0.86
NPIPB4-213ENST00000541329 CHL1O00533 1208 aa9.69□□□□□ -0.86
NPIPB4-213ENST00000541329 SIPA1L3O60292 1781 aaPredicted RBP9.69□□□□□ -0.86
NPIPB4-213ENST00000541329 MEGF6O75095 1541 aa9.69□□□□□ -0.86
NPIPB4-213ENST00000541329 COL14A1Q05707 1796 aaKnown RBP9.69□□□□□ -0.86
NPIPB4-213ENST00000541329 AMOTQ4VCS5 1084 aa9.69□□□□□ -0.86
NPIPB4-213ENST00000541329 C1orf141Q5JVX7 400 aa9.69□□□□□ -0.86
NPIPB4-213ENST00000541329 ZKSCAN2Q63HK3 967 aa9.69□□□□□ -0.86
NPIPB4-213ENST00000541329 MPRIPQ6WCQ1 1025 aa9.69□□□□□ -0.86
NPIPB4-213ENST00000541329 PKD1L3Q7Z443 1732 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms