RNA–Protein interactions for RNA: ENST00000541304.5

CDKN3-206, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2 BASIC

Gene CDKN3, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-206ENST00000541304 RDH13Q8NBN7 331 aa8.16□□□□□ -1.1
CDKN3-206ENST00000541304 SIN3AQ96ST3 1273 aa8.16□□□□□ -1.1
CDKN3-206ENST00000541304 DAXXQ9UER7 740 aaPredicted RBP8.16□□□□□ -1.1
CDKN3-206ENST00000541304 KIAA1210Q9ULL0 1709 aa8.16□□□□□ -1.1
CDKN3-206ENST00000541304 PPLO60437 1756 aa8.15□□□□□ -1.1
CDKN3-206ENST00000541304 DIP2AQ14689 1571 aa8.15□□□□□ -1.1
CDKN3-206ENST00000541304 PRAG1Q86YV5 1406 aa8.15□□□□□ -1.1
CDKN3-206ENST00000541304 ADH1BP00325 375 aa8.15□□□□□ -1.1
CDKN3-206ENST00000541304 ZNF326Q5BKZ1 582 aaKnown RBP8.15□□□□□ -1.1
CDKN3-206ENST00000541304 L3MBTL2Q969R5 705 aa8.15□□□□□ -1.1
CDKN3-206ENST00000541304 EID1Q9Y6B2 187 aa8.15□□□□□ -1.1
CDKN3-206ENST00000541304 RALGAPBQ86X10 1494 aa8.14□□□□□ -1.11
CDKN3-206ENST00000541304 PIK3C2GO75747 1445 aa8.14□□□□□ -1.11
CDKN3-206ENST00000541304 RIMS2Q9UQ26 1411 aa8.14□□□□□ -1.11
CDKN3-206ENST00000541304 DDX11L8A8MPP1 907 aa8.14□□□□□ -1.11
CDKN3-206ENST00000541304 PPP1R15AO75807 674 aaPredicted RBP8.14□□□□□ -1.11
CDKN3-206ENST00000541304 CEBPAP49715 358 aaPredicted RBP8.14□□□□□ -1.11
CDKN3-206ENST00000541304 SULF1Q8IWU6 871 aa8.14□□□□□ -1.11
CDKN3-206ENST00000541304 DCAF11Q8TEB1 546 aa8.14□□□□□ -1.11
CDKN3-206ENST00000541304 SETBP1Q9Y6X0 1596 aa8.14□□□□□ -1.11
CDKN3-206ENST00000541304 SCAF11Q99590 1463 aaKnown RBP8.13□□□□□ -1.11
CDKN3-206ENST00000541304 PLEKHG1Q9ULL1 1385 aa8.13□□□□□ -1.11
CDKN3-206ENST00000541304 RNF223E7ERA6 249 aa8.13□□□□□ -1.11
CDKN3-206ENST00000541304 GFRA3O60609 400 aa8.13□□□□□ -1.11
CDKN3-206ENST00000541304 NLRP7Q8WX94 980 aa8.13□□□□□ -1.11
CDKN3-206ENST00000541304 GPRASP1Q5JY77 1395 aa8.12□□□□□ -1.11
CDKN3-206ENST00000541304 NRG2O14511 850 aaPredicted RBP8.12□□□□□ -1.11
CDKN3-206ENST00000541304 S1PR4O95977 384 aa8.12□□□□□ -1.11
CDKN3-206ENST00000541304 MAP2K5Q13163 448 aa8.12□□□□□ -1.11
CDKN3-206ENST00000541304 RGL3Q3MIN7 710 aa8.12□□□□□ -1.11
CDKN3-206ENST00000541304 ANKLE1Q8NAG6 615 aa8.12□□□□□ -1.11
CDKN3-206ENST00000541304 MED14O60244 1454 aa8.12□□□□□ -1.11
CDKN3-206ENST00000541304 EIF3AQ14152 1382 aaKnown RBP8.11□□□□□ -1.11
CDKN3-206ENST00000541304 PIK3R4Q99570 1358 aa8.11□□□□□ -1.11
CDKN3-206ENST00000541304 TRPM1Q7Z4N2 1603 aa8.11□□□□□ -1.11
CDKN3-206ENST00000541304 SLC24A1O60721 1099 aa8.11□□□□□ -1.11
CDKN3-206ENST00000541304 PUS10Q3MIT2 529 aaKnown RBP8.11□□□□□ -1.11
CDKN3-206ENST00000541304 PHOX2BQ99453 314 aa8.11□□□□□ -1.11
CDKN3-206ENST00000541304 ANKLE2Q86XL3 938 aa8.1□□□□□ -1.11
CDKN3-206ENST00000541304 SLC6A16Q9GZN6 736 aa8.1□□□□□ -1.11
CDKN3-206ENST00000541304 LMTK3Q96Q04 1460 aa8.1□□□□□ -1.11
CDKN3-206ENST00000541304 ROCK2O75116 1388 aaKnown RBP8.1□□□□□ -1.11
CDKN3-206ENST00000541304 CFAP65Q6ZU64 1925 aaKnown RBP8.09□□□□□ -1.11
CDKN3-206ENST00000541304 POLR1AO95602 1720 aaPredicted RBP8.09□□□□□ -1.11
CDKN3-206ENST00000541304 FUT2Q10981 343 aa8.09□□□□□ -1.11
CDKN3-206ENST00000541304 SCUBE3Q8IX30 993 aa8.09□□□□□ -1.11
CDKN3-206ENST00000541304 MYO5BQ9ULV0 1848 aa8.08□□□□□ -1.12
CDKN3-206ENST00000541304 SLC19A1P41440 591 aa8.08□□□□□ -1.12
CDKN3-206ENST00000541304 GCGRP47871 477 aa8.08□□□□□ -1.12
CDKN3-206ENST00000541304 MORN1Q5T089 497 aa8.08□□□□□ -1.12
CDKN3-206ENST00000541304 TXNDC2Q86VQ3 553 aa8.08□□□□□ -1.12
CDKN3-206ENST00000541304 SPSB2Q99619 263 aa8.08□□□□□ -1.12
CDKN3-206ENST00000541304 C14orf93Q9H972 538 aaKnown RBP8.08□□□□□ -1.12
CDKN3-206ENST00000541304 PDZRN3Q9UPQ7 1066 aa8.08□□□□□ -1.12
CDKN3-206ENST00000541304 ALKQ9UM73 1620 aa8.07□□□□□ -1.12
CDKN3-206ENST00000541304 ADGRB1O14514 1584 aa8.07□□□□□ -1.12
CDKN3-206ENST00000541304 NPHP4O75161 1426 aaPredicted RBP8.07□□□□□ -1.12
CDKN3-206ENST00000541304 PPEF1O14829 653 aaPredicted RBP8.07□□□□□ -1.12
CDKN3-206ENST00000541304 ATP6V1AP38606 617 aa8.07□□□□□ -1.12
CDKN3-206ENST00000541304 IQGAP1P46940 1657 aa8.07□□□□□ -1.12
CDKN3-206ENST00000541304 DLC1Q96QB1 1528 aa8.07□□□□□ -1.12
CDKN3-206ENST00000541304 ADGRF5Q8IZF2 1346 aa8.06□□□□□ -1.12
CDKN3-206ENST00000541304 TECPR2O15040 1411 aa8.06□□□□□ -1.12
CDKN3-206ENST00000541304 EMID1Q96A84 441 aaPredicted RBP8.06□□□□□ -1.12
CDKN3-206ENST00000541304 TBX22Q9Y458 520 aa8.06□□□□□ -1.12
CDKN3-206ENST00000541304 SBNO2Q9Y2G9 1366 aa8.06□□□□□ -1.12
CDKN3-206ENST00000541304 NRXN3Q9Y4C0 1643 aa8.06□□□□□ -1.12
CDKN3-206ENST00000541304 MINK1Q8N4C8 1332 aaPredicted RBP8.05□□□□□ -1.12
CDKN3-206ENST00000541304 PTCH1Q13635 1447 aa8.05□□□□□ -1.12
CDKN3-206ENST00000541304 ADAMTS13Q76LX8 1427 aa8.05□□□□□ -1.12
CDKN3-206ENST00000541304 EIF4G2P78344 907 aaKnown RBP eCLIP8.05□□□□□ -1.12
CDKN3-206ENST00000541304 CARD11Q9BXL7 1154 aa8.05□□□□□ -1.12
CDKN3-206ENST00000541304 KNDC1Q76NI1 1749 aa8.05□□□□□ -1.12
CDKN3-206ENST00000541304 FAM135BQ49AJ0 1406 aa8.04□□□□□ -1.12
CDKN3-206ENST00000541304 CPS1P31327 1500 aa8.04□□□□□ -1.12
CDKN3-206ENST00000541304 SETD1AO15047 1707 aaKnown RBP8.04□□□□□ -1.12
CDKN3-206ENST00000541304 IRF6O14896 467 aa8.04□□□□□ -1.12
CDKN3-206ENST00000541304 FMNL1O95466 1100 aaPredicted RBP8.04□□□□□ -1.12
CDKN3-206ENST00000541304 LTKP29376 864 aa8.04□□□□□ -1.12
CDKN3-206ENST00000541304 NBPF8Q3BBV2 869 aa8.04□□□□□ -1.12
CDKN3-206ENST00000541304 GRIPAP1Q4V328 841 aa8.04□□□□□ -1.12
CDKN3-206ENST00000541304 SPRYD7Q5W111 196 aa8.04□□□□□ -1.12
CDKN3-206ENST00000541304 CCDC102AQ96A19 550 aa8.04□□□□□ -1.12
CDKN3-206ENST00000541304 SIRT1Q96EB6 747 aa8.04□□□□□ -1.12
CDKN3-206ENST00000541304 LRPPRCP42704 1394 aaKnown RBP8.04□□□□□ -1.12
CDKN3-206ENST00000541304 ABCC11Q96J66 1382 aa8.04□□□□□ -1.12
CDKN3-206ENST00000541304 USP47Q96K76 1375 aa8.04□□□□□ -1.12
CDKN3-206ENST00000541304 NKTRP30414 1462 aaKnown RBP8.04□□□□□ -1.12
CDKN3-206ENST00000541304 YTHDC2Q9H6S0 1430 aaKnown RBP8.03□□□□□ -1.12
CDKN3-206ENST00000541304 NWD1Q149M9 1564 aa8.03□□□□□ -1.12
CDKN3-206ENST00000541304 LCE2BO14633 110 aa8.03□□□□□ -1.12
CDKN3-206ENST00000541304 CD46P15529 392 aa8.03□□□□□ -1.12
CDKN3-206ENST00000541304 TRAF7Q6Q0C0 670 aa8.03□□□□□ -1.12
CDKN3-206ENST00000541304 ZNF598Q86UK7 904 aaKnown RBP8.03□□□□□ -1.12
CDKN3-206ENST00000541304 THAP11Q96EK4 314 aa8.03□□□□□ -1.12
CDKN3-206ENST00000541304 SLC27A5Q9Y2P5 690 aa8.03□□□□□ -1.12
CDKN3-206ENST00000541304 MDM2Q00987 491 aaPredicted RBP8.02□□□□□ -1.13
CDKN3-206ENST00000541304 CFAP70Q5T0N1 1121 aa8.02□□□□□ -1.13
CDKN3-206ENST00000541304 ZNF697Q5TEC3 545 aa8.02□□□□□ -1.13
CDKN3-206ENST00000541304 LIAT1Q6ZQX7 453 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms