RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 MAP3K2Q9Y2U5 619 aa11.62□□□□□ -0.55
TTC39C-203ENST00000540918 SPATA31E1Q6ZUB1 1445 aa11.62□□□□□ -0.55
TTC39C-203ENST00000540918 LRPPRCP42704 1394 aaKnown RBP11.62□□□□□ -0.55
TTC39C-203ENST00000540918 GCC1Q96CN9 775 aa11.62□□□□□ -0.55
TTC39C-203ENST00000540918 WWC3Q9ULE0 1092 aa11.62□□□□□ -0.55
TTC39C-203ENST00000540918 COL17A1Q9UMD9 1497 aaPredicted RBP11.61□□□□□ -0.55
TTC39C-203ENST00000540918 G2E3Q7L622 706 aa11.61□□□□□ -0.55
TTC39C-203ENST00000540918 C8orf37Q96NL8 207 aa11.61□□□□□ -0.55
TTC39C-203ENST00000540918 UPF3BQ9BZI7 483 aaKnown RBP11.61□□□□□ -0.55
TTC39C-203ENST00000540918 BOLA2Q9H3K6 86 aa11.61□□□□□ -0.55
TTC39C-203ENST00000540918 PHAXQ9H814 394 aaKnown RBP11.61□□□□□ -0.55
TTC39C-203ENST00000540918 ABCC1P33527 1531 aa11.61□□□□□ -0.55
TTC39C-203ENST00000540918 ERC2O15083 957 aa11.61□□□□□ -0.55
TTC39C-203ENST00000540918 HOXC9P31274 260 aa11.61□□□□□ -0.55
TTC39C-203ENST00000540918 HSP90AB4PQ58FF6 505 aa11.61□□□□□ -0.55
TTC39C-203ENST00000540918 UBE3BQ7Z3V4 1068 aa11.61□□□□□ -0.55
TTC39C-203ENST00000540918 RUFY2Q8WXA3 655 aa11.61□□□□□ -0.55
TTC39C-203ENST00000540918 RSPH6AQ9H0K4 717 aa11.61□□□□□ -0.55
TTC39C-203ENST00000540918 TMEM2Q9UHN6 1383 aa11.6□□□□□ -0.55
TTC39C-203ENST00000540918 A0A087WZG4 1122 aa11.6□□□□□ -0.55
TTC39C-203ENST00000540918 EXOC5O00471 708 aa11.6□□□□□ -0.55
TTC39C-203ENST00000540918 FAM184AQ8NB25 1140 aa11.6□□□□□ -0.55
TTC39C-203ENST00000540918 DNAAF4Q8WXU2 420 aa11.6□□□□□ -0.55
TTC39C-203ENST00000540918 CT47B1P0C2W7 299 aaPredicted RBP11.6□□□□□ -0.55
TTC39C-203ENST00000540918 STK3Q13188 491 aa11.6□□□□□ -0.55
TTC39C-203ENST00000540918 CREBRFQ8IUR6 639 aa11.6□□□□□ -0.55
TTC39C-203ENST00000540918 ZCCHC11Q5TAX3 1644 aaKnown RBP11.6□□□□□ -0.55
TTC39C-203ENST00000540918 MSH6P52701 1360 aa11.6□□□□□ -0.55
TTC39C-203ENST00000540918 H3BQV1 296 aa11.6□□□□□ -0.55
TTC39C-203ENST00000540918 PPFIA3O75145 1194 aa11.6□□□□□ -0.55
TTC39C-203ENST00000540918 VAMP4O75379 141 aa11.6□□□□□ -0.55
TTC39C-203ENST00000540918 AMOTQ4VCS5 1084 aa11.6□□□□□ -0.55
TTC39C-203ENST00000540918 IFFO2Q5TF58 517 aa11.6□□□□□ -0.55
TTC39C-203ENST00000540918 CCDC57Q2TAC2 916 aa11.59□□□□□ -0.55
TTC39C-203ENST00000540918 IFNL2Q8IZJ0 200 aa11.59□□□□□ -0.55
TTC39C-203ENST00000540918 NFKBIBQ15653 356 aa11.59□□□□□ -0.55
TTC39C-203ENST00000540918 NBPF6Q5VWK0 638 aa11.59□□□□□ -0.55
TTC39C-203ENST00000540918 DRC7Q8IY82 874 aa11.59□□□□□ -0.55
TTC39C-203ENST00000540918 NBPF4Q96M43 638 aa11.59□□□□□ -0.55
TTC39C-203ENST00000540918 TRIM35Q9UPQ4 493 aa11.59□□□□□ -0.55
TTC39C-203ENST00000540918 PTPRTO14522 1441 aa11.59□□□□□ -0.55
TTC39C-203ENST00000540918 IL13P35225 146 aa11.59□□□□□ -0.55
TTC39C-203ENST00000540918 CWF19L2Q2TBE0 894 aaKnown RBP11.59□□□□□ -0.55
TTC39C-203ENST00000540918 RRP12Q5JTH9 1297 aaKnown RBP11.59□□□□□ -0.55
TTC39C-203ENST00000540918 COPS6Q7L5N1 327 aa11.59□□□□□ -0.55
TTC39C-203ENST00000540918 MAGI2Q86UL8 1455 aa11.59□□□□□ -0.55
TTC39C-203ENST00000540918 NPHP3Q7Z494 1330 aa11.58□□□□□ -0.55
TTC39C-203ENST00000540918 CNTROBQ8N137 903 aa11.58□□□□□ -0.55
TTC39C-203ENST00000540918 SNRKQ9NRH2 765 aa11.58□□□□□ -0.56
TTC39C-203ENST00000540918 DBF4Q9UBU7 674 aaPredicted RBP11.58□□□□□ -0.56
TTC39C-203ENST00000540918 MYO5CQ9NQX4 1742 aa11.58□□□□□ -0.56
TTC39C-203ENST00000540918 POLR3AO14802 1390 aaPredicted RBP11.58□□□□□ -0.56
TTC39C-203ENST00000540918 NSD2O96028 1365 aa11.58□□□□□ -0.56
TTC39C-203ENST00000540918 ALDH1L2Q3SY69 923 aa11.58□□□□□ -0.56
TTC39C-203ENST00000540918 PHF14O94880 888 aa11.57□□□□□ -0.56
TTC39C-203ENST00000540918 PPP1R42Q7Z4L9 355 aa11.57□□□□□ -0.56
TTC39C-203ENST00000540918 RPAP2Q8IXW5 612 aaPredicted RBP11.57□□□□□ -0.56
TTC39C-203ENST00000540918 XAGE3Q8WTP9 111 aa11.57□□□□□ -0.56
TTC39C-203ENST00000540918 MPHOSPH8Q99549 860 aa11.57□□□□□ -0.56
TTC39C-203ENST00000540918 SF3A1Q15459 793 aaKnown RBP11.57□□□□□ -0.56
TTC39C-203ENST00000540918 BTG4Q9NY30 223 aa11.57□□□□□ -0.56
TTC39C-203ENST00000540918 ZNF219Q9P2Y4 722 aaPredicted RBP11.57□□□□□ -0.56
TTC39C-203ENST00000540918 PA2G4Q9UQ80 394 aaKnown RBP11.57□□□□□ -0.56
TTC39C-203ENST00000540918 ATP2B1P20020 1258 aa11.56□□□□□ -0.56
TTC39C-203ENST00000540918 PRDM15P57071 1507 aaPredicted RBP11.56□□□□□ -0.56
TTC39C-203ENST00000540918 TTC21AQ8NDW8 1320 aa11.56□□□□□ -0.56
TTC39C-203ENST00000540918 KCNQ3O43525 872 aa11.56□□□□□ -0.56
TTC39C-203ENST00000540918 NFXL1Q6ZNB6 911 aa11.56□□□□□ -0.56
TTC39C-203ENST00000540918 ZCRB1Q8TBF4 217 aaKnown RBP11.56□□□□□ -0.56
TTC39C-203ENST00000540918 NEO1Q92859 1461 aa11.56□□□□□ -0.56
TTC39C-203ENST00000540918 PRR36Q9H6K5 1346 aa11.56□□□□□ -0.56
TTC39C-203ENST00000540918 CPLX1O14810 134 aa11.56□□□□□ -0.56
TTC39C-203ENST00000540918 STARD3NLO95772 234 aa11.56□□□□□ -0.56
TTC39C-203ENST00000540918 FMNL2Q96PY5 1086 aa11.56□□□□□ -0.56
TTC39C-203ENST00000540918 TBC1D2BQ9UPU7 963 aa11.56□□□□□ -0.56
TTC39C-203ENST00000540918 CEP126Q9P2H0 1117 aa11.55□□□□□ -0.56
TTC39C-203ENST00000540918 ABCF2Q9UG63 623 aa11.55□□□□□ -0.56
TTC39C-203ENST00000540918 ABCC11Q96J66 1382 aa11.55□□□□□ -0.56
TTC39C-203ENST00000540918 CEBPZQ03701 1054 aaKnown RBP11.55□□□□□ -0.56
TTC39C-203ENST00000540918 NAP1L5Q96NT1 182 aaPredicted RBP11.55□□□□□ -0.56
TTC39C-203ENST00000540918 ROBO2Q9HCK4 1378 aa11.55□□□□□ -0.56
TTC39C-203ENST00000540918 GOLGA6L3A6NEY3 463 aa11.55□□□□□ -0.56
TTC39C-203ENST00000540918 DTNBO60941 627 aa11.55□□□□□ -0.56
TTC39C-203ENST00000540918 IDH1O75874 414 aaKnown RBP11.55□□□□□ -0.56
TTC39C-203ENST00000540918 MRPL50Q8N5N7 158 aaKnown RBP11.55□□□□□ -0.56
TTC39C-203ENST00000540918 RASSF8Q8NHQ8 419 aa11.55□□□□□ -0.56
TTC39C-203ENST00000540918 TRMT112Q9UI30 125 aaKnown RBP11.55□□□□□ -0.56
TTC39C-203ENST00000540918 FLT4P35916 1363 aa11.55□□□□□ -0.56
TTC39C-203ENST00000540918 DHX16O60231 1041 aaKnown RBP11.54□□□□□ -0.56
TTC39C-203ENST00000540918 LARP1Q6PKG0 1096 aaKnown RBP11.54□□□□□ -0.56
TTC39C-203ENST00000540918 ZFYVE16Q7Z3T8 1539 aa11.54□□□□□ -0.56
TTC39C-203ENST00000540918 TRDNQ13061 729 aa11.54□□□□□ -0.56
TTC39C-203ENST00000540918 TTC39AQ5SRH9 613 aa11.54□□□□□ -0.56
TTC39C-203ENST00000540918 ARID3AQ99856 593 aa11.54□□□□□ -0.56
TTC39C-203ENST00000540918 SMC3Q9UQE7 1217 aa11.54□□□□□ -0.56
TTC39C-203ENST00000540918 NINLQ9Y2I6 1382 aa11.54□□□□□ -0.56
TTC39C-203ENST00000540918 MX1P20591 662 aa11.54□□□□□ -0.56
TTC39C-203ENST00000540918 AAMPQ13685 434 aa11.54□□□□□ -0.56
TTC39C-203ENST00000540918 CHMP5Q9NZZ3 219 aa11.54□□□□□ -0.56
TTC39C-203ENST00000540918 IQSEC3Q9UPP2 1182 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms