RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 RALBP1Q15311 655 aa18.09■□□□□ 0.49
PRPF19-204ENST00000539960 SULT6B1Q6IMI4 303 aa18.09■□□□□ 0.49
PRPF19-204ENST00000539960 DEFB132Q7Z7B7 95 aa18.09■□□□□ 0.49
PRPF19-204ENST00000539960 CFAP53Q96M91 514 aa18.09■□□□□ 0.49
PRPF19-204ENST00000539960 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.09■□□□□ 0.49
PRPF19-204ENST00000539960 APBA3O96018 575 aa18.08■□□□□ 0.48
PRPF19-204ENST00000539960 BAG6P46379 1132 aa18.08■□□□□ 0.48
PRPF19-204ENST00000539960 AEBP1Q8IUX7 1158 aa18.08■□□□□ 0.48
PRPF19-204ENST00000539960 BCL11BQ9C0K0 894 aaPredicted RBP18.08■□□□□ 0.48
PRPF19-204ENST00000539960 SPG7Q9UQ90 795 aa18.08■□□□□ 0.48
PRPF19-204ENST00000539960 PTF1AQ7RTS3 328 aa18.07■□□□□ 0.48
PRPF19-204ENST00000539960 KCNQ2O43526 872 aa18.06■□□□□ 0.48
PRPF19-204ENST00000539960 PCDH11XQ9BZA7 1347 aa18.05■□□□□ 0.48
PRPF19-204ENST00000539960 PCDH11YQ9BZA8 1340 aa18.05■□□□□ 0.48
PRPF19-204ENST00000539960 CYP27B1O15528 508 aa18.05■□□□□ 0.48
PRPF19-204ENST00000539960 EN1Q05925 392 aaPredicted RBP18.05■□□□□ 0.48
PRPF19-204ENST00000539960 PLEKHO1Q53GL0 409 aaPredicted RBP18.05■□□□□ 0.48
PRPF19-204ENST00000539960 ACSBG1Q96GR2 724 aa18.05■□□□□ 0.48
PRPF19-204ENST00000539960 HMOX1P09601 288 aa18.04■□□□□ 0.48
PRPF19-204ENST00000539960 NUDCQ9Y266 331 aa18.04■□□□□ 0.48
PRPF19-204ENST00000539960 KDRP35968 1356 aa18.04■□□□□ 0.48
PRPF19-204ENST00000539960 PLEKHG2Q9H7P9 1386 aa18.04■□□□□ 0.48
PRPF19-204ENST00000539960 U2SURPO15042 1029 aaKnown RBP18.03■□□□□ 0.48
PRPF19-204ENST00000539960 AMOTQ4VCS5 1084 aa18.03■□□□□ 0.48
PRPF19-204ENST00000539960 CAMKK2Q96RR4 588 aa18.03■□□□□ 0.48
PRPF19-204ENST00000539960 COL3A1P02461 1466 aaPredicted RBP18.02■□□□□ 0.48
PRPF19-204ENST00000539960 PRIM1P49642 420 aaKnown RBP18.02■□□□□ 0.48
PRPF19-204ENST00000539960 NKX1-1Q15270 411 aaPredicted RBP18.02■□□□□ 0.48
PRPF19-204ENST00000539960 PLSCR1O15162 318 aa18.01■□□□□ 0.47
PRPF19-204ENST00000539960 IFNL2Q8IZJ0 200 aa18.01■□□□□ 0.47
PRPF19-204ENST00000539960 PHKG2P15735 406 aa18■□□□□ 0.47
PRPF19-204ENST00000539960 EZH2Q15910 746 aaKnown RBP18■□□□□ 0.47
PRPF19-204ENST00000539960 PRKRIP1Q9H875 184 aaPredicted RBP18■□□□□ 0.47
PRPF19-204ENST00000539960 RGPD1P0DJD0 1748 aa17.99■□□□□ 0.47
PRPF19-204ENST00000539960 SYTL4Q96C24 671 aaPredicted RBP17.99■□□□□ 0.47
PRPF19-204ENST00000539960 U2AF1L5P0DN76 240 aaPredicted RBP17.98■□□□□ 0.47
PRPF19-204ENST00000539960 U2AF1Q01081 240 aaKnown RBP eCLIP17.98■□□□□ 0.47
PRPF19-204ENST00000539960 ZNF530Q6P9A1 599 aaPredicted RBP17.98■□□□□ 0.47
PRPF19-204ENST00000539960 MYBBP1AQ9BQG0 1328 aaKnown RBP17.98■□□□□ 0.47
PRPF19-204ENST00000539960 SBF2Q86WG5 1849 aa17.96■□□□□ 0.47
PRPF19-204ENST00000539960 HSP90AB1P08238 724 aaKnown RBP17.96■□□□□ 0.47
PRPF19-204ENST00000539960 SHANK3Q9BYB0 1731 aa17.95■□□□□ 0.46
PRPF19-204ENST00000539960 TNS1Q9HBL0 1735 aaKnown RBP17.95■□□□□ 0.46
PRPF19-204ENST00000539960 FCHSD2O94868 740 aa17.95■□□□□ 0.46
PRPF19-204ENST00000539960 C1orf141Q5JVX7 400 aa17.95■□□□□ 0.46
PRPF19-204ENST00000539960 PROM2Q8N271 834 aa17.95■□□□□ 0.46
PRPF19-204ENST00000539960 PKD1L3Q7Z443 1732 aa17.95■□□□□ 0.46
PRPF19-204ENST00000539960 MTHFSDQ2M296 383 aaKnown RBP17.94■□□□□ 0.46
PRPF19-204ENST00000539960 DCAF5Q96JK2 942 aa17.94■□□□□ 0.46
PRPF19-204ENST00000539960 RSPH6AQ9H0K4 717 aa17.94■□□□□ 0.46
PRPF19-204ENST00000539960 PRKAR2BP31323 418 aa17.93■□□□□ 0.46
PRPF19-204ENST00000539960 MPRIPQ6WCQ1 1025 aa17.93■□□□□ 0.46
PRPF19-204ENST00000539960 KAT6BQ8WYB5 2073 aa17.92■□□□□ 0.46
PRPF19-204ENST00000539960 ERVV-2B6SEH9 535 aa17.92■□□□□ 0.46
PRPF19-204ENST00000539960 TXNRD1Q16881 649 aa17.92■□□□□ 0.46
PRPF19-204ENST00000539960 AKAP4Q5JQC9 854 aa17.92■□□□□ 0.46
PRPF19-204ENST00000539960 PHACTR3Q96KR7 559 aa17.92■□□□□ 0.46
PRPF19-204ENST00000539960 NHSQ6T4R5 1651 aa17.91■□□□□ 0.46
PRPF19-204ENST00000539960 PIGBQ92521 554 aa17.91■□□□□ 0.46
PRPF19-204ENST00000539960 TMOD3Q9NYL9 352 aa17.9■□□□□ 0.46
PRPF19-204ENST00000539960 ANP32CO43423 234 aa17.89■□□□□ 0.45
PRPF19-204ENST00000539960 GAS2L2Q8NHY3 880 aa17.89■□□□□ 0.45
PRPF19-204ENST00000539960 CABP4P57796 275 aa17.88■□□□□ 0.45
PRPF19-204ENST00000539960 NBPF14Q5TI25 921 aa17.88■□□□□ 0.45
PRPF19-204ENST00000539960 LGR6Q9HBX8 967 aa17.88■□□□□ 0.45
PRPF19-204ENST00000539960 RNMTO43148 476 aaKnown RBP17.87■□□□□ 0.45
PRPF19-204ENST00000539960 SMARCC1Q92922 1105 aaPredicted RBP17.87■□□□□ 0.45
PRPF19-204ENST00000539960 PNNQ9H307 717 aaKnown RBP17.87■□□□□ 0.45
PRPF19-204ENST00000539960 SLC27A3Q5K4L6 730 aa17.86■□□□□ 0.45
PRPF19-204ENST00000539960 NFATC2IPQ8NCF5 419 aa17.86■□□□□ 0.45
PRPF19-204ENST00000539960 PLEKHF1Q96S99 279 aa17.86■□□□□ 0.45
PRPF19-204ENST00000539960 LRRC4BQ9NT99 713 aa17.86■□□□□ 0.45
PRPF19-204ENST00000539960 KDM6AO15550 1401 aaPredicted RBP17.86■□□□□ 0.45
PRPF19-204ENST00000539960 DOT1LQ8TEK3 1739 aa17.86■□□□□ 0.45
PRPF19-204ENST00000539960 GNAT3A8MTJ3 354 aa17.85■□□□□ 0.45
PRPF19-204ENST00000539960 BTAF1O14981 1849 aa17.85■□□□□ 0.45
PRPF19-204ENST00000539960 ASAP1Q9ULH1 1129 aa17.85■□□□□ 0.45
PRPF19-204ENST00000539960 NEFMP07197 916 aa17.84■□□□□ 0.45
PRPF19-204ENST00000539960 ATG3Q9NT62 314 aa17.84■□□□□ 0.45
PRPF19-204ENST00000539960 KCNQ4P56696 695 aa17.83■□□□□ 0.44
PRPF19-204ENST00000539960 R3HDM1Q15032 1099 aaKnown RBP17.83■□□□□ 0.44
PRPF19-204ENST00000539960 WDR43Q15061 677 aaKnown RBP eCLIP17.83■□□□□ 0.44
PRPF19-204ENST00000539960 IL17REQ8NFR9 667 aa17.83■□□□□ 0.44
PRPF19-204ENST00000539960 SLC52A2Q9HAB3 445 aa17.83■□□□□ 0.44
PRPF19-204ENST00000539960 PALLDQ8WX93 1383 aa17.82■□□□□ 0.44
PRPF19-204ENST00000539960 RGPD3A6NKT7 1758 aaPredicted RBP17.82■□□□□ 0.44
PRPF19-204ENST00000539960 RGPD4Q7Z3J3 1758 aa17.82■□□□□ 0.44
PRPF19-204ENST00000539960 TOGARAM1Q9Y4F4 1720 aa17.82■□□□□ 0.44
PRPF19-204ENST00000539960 PSDA5PKW4 1024 aaPredicted RBP17.82■□□□□ 0.44
PRPF19-204ENST00000539960 CCNL1Q9UK58 526 aaPredicted RBP17.82■□□□□ 0.44
PRPF19-204ENST00000539960 ADAMTS8Q9UP79 889 aa17.82■□□□□ 0.44
PRPF19-204ENST00000539960 MAP3K5Q99683 1374 aa17.81■□□□□ 0.44
PRPF19-204ENST00000539960 CCDC184Q52MB2 194 aa17.81■□□□□ 0.44
PRPF19-204ENST00000539960 ANO8Q9HCE9 1232 aaPredicted RBP17.81■□□□□ 0.44
PRPF19-204ENST00000539960 HTATSF1O43719 755 aaKnown RBP17.8■□□□□ 0.44
PRPF19-204ENST00000539960 HMGB2P26583 209 aaKnown RBP17.8■□□□□ 0.44
PRPF19-204ENST00000539960 STK32BQ9NY57 414 aa17.8■□□□□ 0.44
PRPF19-204ENST00000539960 RREB1Q92766 1687 aa17.8■□□□□ 0.44
PRPF19-204ENST00000539960 LOC102724428A0A0B4J2F2 783 aa17.79■□□□□ 0.44
PRPF19-204ENST00000539960 SIK1P57059 783 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms