RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 CCDC61Q9Y6R9 512 aa7.66□□□□□ -1.18
LSAMP-207ENST00000539563 SERPINC1P01008 464 aa7.66□□□□□ -1.18
LSAMP-207ENST00000539563 CEP126Q9P2H0 1117 aa7.66□□□□□ -1.18
LSAMP-207ENST00000539563 ZNF652Q9Y2D9 606 aa7.66□□□□□ -1.18
LSAMP-207ENST00000539563 ABCC11Q96J66 1382 aa7.66□□□□□ -1.18
LSAMP-207ENST00000539563 TMPOP42166 694 aaKnown RBP7.66□□□□□ -1.18
LSAMP-207ENST00000539563 CEP131Q9UPN4 1083 aa7.66□□□□□ -1.18
LSAMP-207ENST00000539563 PATL2C9JE40 543 aaKnown RBP7.66□□□□□ -1.18
LSAMP-207ENST00000539563 LARP1BQ659C4 914 aaKnown RBP7.66□□□□□ -1.18
LSAMP-207ENST00000539563 RNF214Q8ND24 703 aa7.66□□□□□ -1.18
LSAMP-207ENST00000539563 ABCA10Q8WWZ4 1543 aa7.66□□□□□ -1.18
LSAMP-207ENST00000539563 FIBPO43427 364 aa7.66□□□□□ -1.18
LSAMP-207ENST00000539563 NBPF8Q3BBV2 869 aa7.66□□□□□ -1.18
LSAMP-207ENST00000539563 AACSQ86V21 672 aa7.66□□□□□ -1.18
LSAMP-207ENST00000539563 SIL1Q9H173 461 aa7.66□□□□□ -1.18
LSAMP-207ENST00000539563 ZNF287Q9HBT7 754 aa7.66□□□□□ -1.18
LSAMP-207ENST00000539563 AKAP2Q9Y2D5 859 aa7.66□□□□□ -1.18
LSAMP-207ENST00000539563 ATP2B2Q01814 1243 aa7.65□□□□□ -1.18
LSAMP-207ENST00000539563 KDM4AO75164 1064 aa7.65□□□□□ -1.18
LSAMP-207ENST00000539563 ATP2B1P20020 1258 aa7.65□□□□□ -1.18
LSAMP-207ENST00000539563 FKBP4Q02790 459 aaKnown RBP eCLIP7.65□□□□□ -1.18
LSAMP-207ENST00000539563 BIVM-ERCC5R4GMW8 1640 aa7.65□□□□□ -1.18
LSAMP-207ENST00000539563 ARHGEF11O15085 1522 aa7.65□□□□□ -1.18
LSAMP-207ENST00000539563 SRGAP3O43295 1099 aa7.65□□□□□ -1.18
LSAMP-207ENST00000539563 ME1P48163 572 aa7.65□□□□□ -1.18
LSAMP-207ENST00000539563 NUDT16Q96DE0 195 aaKnown RBP7.65□□□□□ -1.18
LSAMP-207ENST00000539563 BRPF1P55201 1214 aaPredicted RBP7.65□□□□□ -1.18
LSAMP-207ENST00000539563 KIF1BPQ96EK5 621 aa7.65□□□□□ -1.18
LSAMP-207ENST00000539563 BACH2Q9BYV9 841 aa7.65□□□□□ -1.18
LSAMP-207ENST00000539563 TTLL5Q6EMB2 1281 aa7.65□□□□□ -1.19
LSAMP-207ENST00000539563 TDO2P48775 406 aa7.65□□□□□ -1.19
LSAMP-207ENST00000539563 BMP2KQ9NSY1 1161 aaPredicted RBP7.65□□□□□ -1.19
LSAMP-207ENST00000539563 PDRG1Q9NUG6 133 aa7.65□□□□□ -1.19
LSAMP-207ENST00000539563 SMTNL1A8MU46 457 aa7.65□□□□□ -1.19
LSAMP-207ENST00000539563 IGHMBP2P38935 993 aaKnown RBP7.65□□□□□ -1.19
LSAMP-207ENST00000539563 ALDH1L2Q3SY69 923 aa7.65□□□□□ -1.19
LSAMP-207ENST00000539563 CEBPZQ03701 1054 aaKnown RBP7.64□□□□□ -1.19
LSAMP-207ENST00000539563 NKTRP30414 1462 aaKnown RBP7.64□□□□□ -1.19
LSAMP-207ENST00000539563 SLFN5Q08AF3 891 aa7.64□□□□□ -1.19
LSAMP-207ENST00000539563 AMOTQ4VCS5 1084 aa7.64□□□□□ -1.19
LSAMP-207ENST00000539563 UBAC1Q9BSL1 405 aa7.64□□□□□ -1.19
LSAMP-207ENST00000539563 DEF6Q9H4E7 631 aa7.64□□□□□ -1.19
LSAMP-207ENST00000539563 ZRSR2Q15696 482 aaKnown RBP7.64□□□□□ -1.19
LSAMP-207ENST00000539563 PPP6R1Q9UPN7 881 aa7.64□□□□□ -1.19
LSAMP-207ENST00000539563 NAIPQ13075 1403 aa7.64□□□□□ -1.19
LSAMP-207ENST00000539563 STK3Q13188 491 aa7.64□□□□□ -1.19
LSAMP-207ENST00000539563 IMMTQ16891 758 aaKnown RBP7.64□□□□□ -1.19
LSAMP-207ENST00000539563 FMNL2Q96PY5 1086 aa7.64□□□□□ -1.19
LSAMP-207ENST00000539563 PRDM11Q9NQV5 511 aa7.64□□□□□ -1.19
LSAMP-207ENST00000539563 LARP1Q6PKG0 1096 aaKnown RBP7.63□□□□□ -1.19
LSAMP-207ENST00000539563 MAP4K4O95819 1239 aaPredicted RBP7.63□□□□□ -1.19
LSAMP-207ENST00000539563 RRS1Q15050 365 aaKnown RBP7.63□□□□□ -1.19
LSAMP-207ENST00000539563 CEP57L1Q8IYX8 460 aa7.63□□□□□ -1.19
LSAMP-207ENST00000539563 U3KPZ7 1027 aaPredicted RBP7.63□□□□□ -1.19
LSAMP-207ENST00000539563 GOLGA6L10A6NI86 522 aa7.63□□□□□ -1.19
LSAMP-207ENST00000539563 ANKRD18AQ8IVF6 992 aa7.63□□□□□ -1.19
LSAMP-207ENST00000539563 CCDC191Q8NCU4 936 aa7.63□□□□□ -1.19
LSAMP-207ENST00000539563 NUP133Q8WUM0 1156 aa7.63□□□□□ -1.19
LSAMP-207ENST00000539563 LRP2BPQ9P2M1 347 aa7.63□□□□□ -1.19
LSAMP-207ENST00000539563 IQCEQ6IPM2 695 aa7.63□□□□□ -1.19
LSAMP-207ENST00000539563 JAKMIP1Q96N16 626 aaKnown RBP7.63□□□□□ -1.19
LSAMP-207ENST00000539563 CD109Q6YHK3 1445 aa7.63□□□□□ -1.19
LSAMP-207ENST00000539563 GLRX3O76003 335 aaKnown RBP7.63□□□□□ -1.19
LSAMP-207ENST00000539563 PLEKHH1Q9ULM0 1364 aa7.63□□□□□ -1.19
LSAMP-207ENST00000539563 DESP17661 470 aa7.63□□□□□ -1.19
LSAMP-207ENST00000539563 CWC27Q6UX04 472 aaKnown RBP7.63□□□□□ -1.19
LSAMP-207ENST00000539563 VSIG10Q8N0Z9 540 aa7.63□□□□□ -1.19
LSAMP-207ENST00000539563 SPATA32Q96LK8 384 aa7.63□□□□□ -1.19
LSAMP-207ENST00000539563 RBM5P52756 815 aaKnown RBP eCLIP7.62□□□□□ -1.19
LSAMP-207ENST00000539563 CCDC181Q5TID7 509 aa7.62□□□□□ -1.19
LSAMP-207ENST00000539563 SPC24Q8NBT2 197 aa7.62□□□□□ -1.19
LSAMP-207ENST00000539563 CCDC66A2RUB6 948 aa7.62□□□□□ -1.19
LSAMP-207ENST00000539563 TAF7Q15545 349 aaPredicted RBP7.62□□□□□ -1.19
LSAMP-207ENST00000539563 LEKR1Q6ZMV7 388 aa7.62□□□□□ -1.19
LSAMP-207ENST00000539563 SLC26A8Q96RN1 970 aa7.62□□□□□ -1.19
LSAMP-207ENST00000539563 PDCL3Q9H2J4 239 aa7.62□□□□□ -1.19
LSAMP-207ENST00000539563 NUTM2BA6NNL0 878 aaPredicted RBP7.62□□□□□ -1.19
LSAMP-207ENST00000539563 NUTM2EB1AL46 878 aaPredicted RBP7.62□□□□□ -1.19
LSAMP-207ENST00000539563 HMGB1P09429 215 aaKnown RBP7.62□□□□□ -1.19
LSAMP-207ENST00000539563 HSP90AB3PQ58FF7 597 aa7.62□□□□□ -1.19
LSAMP-207ENST00000539563 DUSP27Q5VZP5 1158 aa7.62□□□□□ -1.19
LSAMP-207ENST00000539563 NUTM2AQ8IVF1 878 aaPredicted RBP7.62□□□□□ -1.19
LSAMP-207ENST00000539563 DNAI2Q9GZS0 605 aa7.62□□□□□ -1.19
LSAMP-207ENST00000539563 SEPT7Q16181 437 aaKnown RBP7.62□□□□□ -1.19
LSAMP-207ENST00000539563 TANGO6Q9C0B7 1094 aa7.62□□□□□ -1.19
LSAMP-207ENST00000539563 NUP62CLQ9H1M0 184 aa7.62□□□□□ -1.19
LSAMP-207ENST00000539563 ZHX3Q9H4I2 956 aa7.62□□□□□ -1.19
LSAMP-207ENST00000539563 PTPRCP08575 1304 aa7.61□□□□□ -1.19
LSAMP-207ENST00000539563 RAPGEF3O95398 923 aa7.61□□□□□ -1.19
LSAMP-207ENST00000539563 ADGRL1O94910 1474 aa7.61□□□□□ -1.19
LSAMP-207ENST00000539563 TMEM57Q8N5G2 664 aa7.61□□□□□ -1.19
LSAMP-207ENST00000539563 ZNF397Q8NF99 534 aaPredicted RBP7.61□□□□□ -1.19
LSAMP-207ENST00000539563 NSD2O96028 1365 aa7.61□□□□□ -1.19
LSAMP-207ENST00000539563 LRPPRCP42704 1394 aaKnown RBP7.61□□□□□ -1.19
LSAMP-207ENST00000539563 CAVIN4Q5BKX8 364 aa7.61□□□□□ -1.19
LSAMP-207ENST00000539563 CCDC196A0A1B0GTZ2 297 aa7.61□□□□□ -1.19
LSAMP-207ENST00000539563 EIF3JO75822 258 aaKnown RBP7.61□□□□□ -1.19
LSAMP-207ENST00000539563 NEFHP12036 1026 aa7.61□□□□□ -1.19
LSAMP-207ENST00000539563 METTL24Q5JXM2 366 aa7.61□□□□□ -1.19
LSAMP-207ENST00000539563 TRIM21P19474 475 aaKnown RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms