RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 C16orf71Q8IYS4 520 aaPredicted RBP11.94□□□□□ -0.5
CDH13-204ENST00000539548 NUDT16Q96DE0 195 aaKnown RBP11.94□□□□□ -0.5
CDH13-204ENST00000539548 PPP1R9BQ96SB3 815 aa11.94□□□□□ -0.5
CDH13-204ENST00000539548 RGS12O14924 1447 aa11.93□□□□□ -0.5
CDH13-204ENST00000539548 C3P01024 1663 aa11.93□□□□□ -0.5
CDH13-204ENST00000539548 KIAA0232Q92628 1395 aa11.93□□□□□ -0.5
CDH13-204ENST00000539548 ERBB4Q15303 1308 aa11.93□□□□□ -0.5
CDH13-204ENST00000539548 NRKQ7Z2Y5 1582 aa11.93□□□□□ -0.5
CDH13-204ENST00000539548 CHL1O00533 1208 aa11.93□□□□□ -0.5
CDH13-204ENST00000539548 CYP2E1P05181 493 aaPredicted RBP11.93□□□□□ -0.5
CDH13-204ENST00000539548 SIRT1Q96EB6 747 aa11.93□□□□□ -0.5
CDH13-204ENST00000539548 SPATA31D1Q6ZQQ2 1576 aa11.93□□□□□ -0.5
CDH13-204ENST00000539548 CCDC173Q0VFZ6 552 aa11.92□□□□□ -0.5
CDH13-204ENST00000539548 DCTN1Q14203 1278 aa11.92□□□□□ -0.5
CDH13-204ENST00000539548 RRS1Q15050 365 aaKnown RBP11.92□□□□□ -0.5
CDH13-204ENST00000539548 CEP85Q6P2H3 762 aa11.92□□□□□ -0.5
CDH13-204ENST00000539548 CWC22Q9HCG8 908 aaKnown RBP11.92□□□□□ -0.5
CDH13-204ENST00000539548 CCDC61Q9Y6R9 512 aa11.92□□□□□ -0.5
CDH13-204ENST00000539548 DDX49Q9Y6V7 483 aaKnown RBP11.92□□□□□ -0.5
CDH13-204ENST00000539548 ITSN1Q15811 1721 aa11.92□□□□□ -0.5
CDH13-204ENST00000539548 CASC1Q6TDU7 716 aa11.92□□□□□ -0.5
CDH13-204ENST00000539548 NRXN3Q9Y4C0 1643 aa11.92□□□□□ -0.5
CDH13-204ENST00000539548 AGLP35573 1532 aa11.91□□□□□ -0.5
CDH13-204ENST00000539548 PTPRCP08575 1304 aa11.91□□□□□ -0.5
CDH13-204ENST00000539548 SDSP20132 328 aa11.91□□□□□ -0.5
CDH13-204ENST00000539548 RTL1A6NKG5 1358 aa11.91□□□□□ -0.5
CDH13-204ENST00000539548 ZNF445P59923 1031 aa11.91□□□□□ -0.5
CDH13-204ENST00000539548 NASPP49321 788 aaPredicted RBP11.9□□□□□ -0.5
CDH13-204ENST00000539548 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.9□□□□□ -0.5
CDH13-204ENST00000539548 OTUD7AQ8TE49 926 aaPredicted RBP11.9□□□□□ -0.5
CDH13-204ENST00000539548 ST18O60284 1047 aa11.89□□□□□ -0.51
CDH13-204ENST00000539548 EIF4A2Q14240 407 aaKnown RBP11.89□□□□□ -0.51
CDH13-204ENST00000539548 LMBRD1Q9NUN5 540 aa11.89□□□□□ -0.51
CDH13-204ENST00000539548 REC8O95072 547 aa11.89□□□□□ -0.51
CDH13-204ENST00000539548 MCTP1Q6DN14 999 aa11.89□□□□□ -0.51
CDH13-204ENST00000539548 TXNDC2Q86VQ3 553 aa11.89□□□□□ -0.51
CDH13-204ENST00000539548 ANP32BQ92688 251 aaKnown RBP11.89□□□□□ -0.51
CDH13-204ENST00000539548 METP08581 1390 aa11.89□□□□□ -0.51
CDH13-204ENST00000539548 TECPR2O15040 1411 aa11.89□□□□□ -0.51
CDH13-204ENST00000539548 SULT6B1Q6IMI4 303 aa11.88□□□□□ -0.51
CDH13-204ENST00000539548 AEBP1Q8IUX7 1158 aa11.88□□□□□ -0.51
CDH13-204ENST00000539548 OSBPL3Q9H4L5 887 aa11.88□□□□□ -0.51
CDH13-204ENST00000539548 NCKAP5LQ9HCH0 1330 aa11.88□□□□□ -0.51
CDH13-204ENST00000539548 MSH6P52701 1360 aa11.88□□□□□ -0.51
CDH13-204ENST00000539548 SMARCA5O60264 1052 aaPredicted RBP11.88□□□□□ -0.51
CDH13-204ENST00000539548 KRT24Q2M2I5 525 aa11.88□□□□□ -0.51
CDH13-204ENST00000539548 MEIS3Q99687 375 aa11.88□□□□□ -0.51
CDH13-204ENST00000539548 ERC2O15083 957 aa11.87□□□□□ -0.51
CDH13-204ENST00000539548 HMMRO75330 724 aa11.87□□□□□ -0.51
CDH13-204ENST00000539548 ZSCAN30Q86W11 494 aa11.86□□□□□ -0.51
CDH13-204ENST00000539548 RGPD1P0DJD0 1748 aa11.86□□□□□ -0.51
CDH13-204ENST00000539548 CRB1P82279 1406 aa11.86□□□□□ -0.51
CDH13-204ENST00000539548 ZSCAN23Q3MJ62 389 aa11.86□□□□□ -0.51
CDH13-204ENST00000539548 MCM10Q7L590 875 aa11.86□□□□□ -0.51
CDH13-204ENST00000539548 PRR36Q9H6K5 1346 aa11.86□□□□□ -0.51
CDH13-204ENST00000539548 SLC4A2P04920 1241 aa11.85□□□□□ -0.51
CDH13-204ENST00000539548 HS1BP3Q53T59 392 aa11.85□□□□□ -0.51
CDH13-204ENST00000539548 ZDHHC9Q9Y397 364 aa11.85□□□□□ -0.51
CDH13-204ENST00000539548 TTC21BQ7Z4L5 1316 aa11.85□□□□□ -0.51
CDH13-204ENST00000539548 RRP9O43818 475 aaKnown RBP11.85□□□□□ -0.51
CDH13-204ENST00000539548 CCT4P50991 539 aaKnown RBP11.85□□□□□ -0.51
CDH13-204ENST00000539548 PDE1AP54750 535 aa11.85□□□□□ -0.51
CDH13-204ENST00000539548 PKP1Q13835 747 aa11.85□□□□□ -0.51
CDH13-204ENST00000539548 CAVIN1Q6NZI2 390 aaKnown RBP11.85□□□□□ -0.51
CDH13-204ENST00000539548 APBB1O00213 710 aa11.84□□□□□ -0.51
CDH13-204ENST00000539548 TPM2P07951 284 aa11.84□□□□□ -0.51
CDH13-204ENST00000539548 NCLP19338 710 aaKnown RBP11.84□□□□□ -0.51
CDH13-204ENST00000539548 HDGFP51858 240 aaKnown RBP11.84□□□□□ -0.51
CDH13-204ENST00000539548 ZGPATQ8N5A5 531 aaKnown RBP11.84□□□□□ -0.51
CDH13-204ENST00000539548 OVOS2A0A0J9YW53 1432 aa11.84□□□□□ -0.51
CDH13-204ENST00000539548 OVOS2Q6IE36 1432 aa11.84□□□□□ -0.51
CDH13-204ENST00000539548 NALCNQ8IZF0 1738 aa11.84□□□□□ -0.51
CDH13-204ENST00000539548 PEAK1Q9H792 1746 aa11.84□□□□□ -0.51
CDH13-204ENST00000539548 TUBGCP6Q96RT7 1819 aa11.84□□□□□ -0.51
CDH13-204ENST00000539548 PRPF40AO75400 957 aaKnown RBP11.83□□□□□ -0.52
CDH13-204ENST00000539548 HSP90AA2PQ14568 343 aaPredicted RBP11.83□□□□□ -0.52
CDH13-204ENST00000539548 PLEKHG3A1L390 1219 aa11.82□□□□□ -0.52
CDH13-204ENST00000539548 MCM2P49736 904 aa11.82□□□□□ -0.52
CDH13-204ENST00000539548 GPT2Q8TD30 523 aa11.82□□□□□ -0.52
CDH13-204ENST00000539548 PDLIM2Q96JY6 352 aa11.82□□□□□ -0.52
CDH13-204ENST00000539548 RBSNQ9H1K0 784 aa11.82□□□□□ -0.52
CDH13-204ENST00000539548 TOPAZ1Q8N9V7 1692 aa11.82□□□□□ -0.52
CDH13-204ENST00000539548 OFD1O75665 1012 aa11.82□□□□□ -0.52
CDH13-204ENST00000539548 HSP90AB2PQ58FF8 381 aa11.82□□□□□ -0.52
CDH13-204ENST00000539548 SALL3Q9BXA9 1300 aa11.82□□□□□ -0.52
CDH13-204ENST00000539548 USP31Q70CQ4 1352 aa11.82□□□□□ -0.52
CDH13-204ENST00000539548 GNAI2P04899 355 aa11.81□□□□□ -0.52
CDH13-204ENST00000539548 G2E3Q7L622 706 aa11.81□□□□□ -0.52
CDH13-204ENST00000539548 ACEP12821 1306 aa11.81□□□□□ -0.52
CDH13-204ENST00000539548 ARHGEF10O15013 1369 aa11.81□□□□□ -0.52
CDH13-204ENST00000539548 MSNP26038 577 aaKnown RBP11.81□□□□□ -0.52
CDH13-204ENST00000539548 PRIM1P49642 420 aaKnown RBP11.81□□□□□ -0.52
CDH13-204ENST00000539548 CUL4AQ13619 759 aa11.81□□□□□ -0.52
CDH13-204ENST00000539548 TMX3Q96JJ7 454 aa11.81□□□□□ -0.52
CDH13-204ENST00000539548 ESYT1Q9BSJ8 1104 aa11.81□□□□□ -0.52
CDH13-204ENST00000539548 NEK4P51957 841 aa11.8□□□□□ -0.52
CDH13-204ENST00000539548 TERF1P54274 439 aa11.8□□□□□ -0.52
CDH13-204ENST00000539548 ANAPC15P60006 121 aa11.8□□□□□ -0.52
CDH13-204ENST00000539548 GLIPR1L2Q4G1C9 344 aa11.8□□□□□ -0.52
CDH13-204ENST00000539548 LRSAM1Q6UWE0 723 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms