RNA–Protein interactions for RNA: ENST00000539469.6

PDZRN4-203, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 1 (best) BASIC

Gene PDZRN4, Length 3,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-203ENST00000539469 SMG6Q86US8 1419 aaKnown RBP8.02□□□□□ -1.13
PDZRN4-203ENST00000539469 ABCA3Q99758 1704 aa8.02□□□□□ -1.13
PDZRN4-203ENST00000539469 FOXO3O43524 673 aa8.01□□□□□ -1.13
PDZRN4-203ENST00000539469 NFAT5O94916 1531 aa8.01□□□□□ -1.13
PDZRN4-203ENST00000539469 NUTM2GQ5VZR2 741 aa8.01□□□□□ -1.13
PDZRN4-203ENST00000539469 MED1Q15648 1581 aaPredicted RBP8.01□□□□□ -1.13
PDZRN4-203ENST00000539469 TTC21AQ8NDW8 1320 aa8.01□□□□□ -1.13
PDZRN4-203ENST00000539469 USP31Q70CQ4 1352 aa8□□□□□ -1.13
PDZRN4-203ENST00000539469 CARNS1A5YM72 827 aa8□□□□□ -1.13
PDZRN4-203ENST00000539469 MTHFSP49914 203 aa8□□□□□ -1.13
PDZRN4-203ENST00000539469 BRINP3Q76B58 766 aa8□□□□□ -1.13
PDZRN4-203ENST00000539469 ILDR1Q86SU0 546 aaPredicted RBP8□□□□□ -1.13
PDZRN4-203ENST00000539469 CWC22Q9HCG8 908 aaKnown RBP8□□□□□ -1.13
PDZRN4-203ENST00000539469 RGPD5Q99666 1765 aa8□□□□□ -1.13
PDZRN4-203ENST00000539469 SLIT3O75094 1523 aa8□□□□□ -1.13
PDZRN4-203ENST00000539469 RTL5Q5HYW3 569 aaPredicted RBP8□□□□□ -1.13
PDZRN4-203ENST00000539469 COG3Q96JB2 828 aa7.99□□□□□ -1.13
PDZRN4-203ENST00000539469 EMILIN1Q9Y6C2 1016 aa7.99□□□□□ -1.13
PDZRN4-203ENST00000539469 BLMP54132 1417 aaPredicted RBP7.99□□□□□ -1.13
PDZRN4-203ENST00000539469 CDK12Q9NYV4 1490 aaPredicted RBP7.99□□□□□ -1.13
PDZRN4-203ENST00000539469 AATKQ6ZMQ8 1374 aa7.99□□□□□ -1.13
PDZRN4-203ENST00000539469 RGPD1P0DJD0 1748 aa7.99□□□□□ -1.13
PDZRN4-203ENST00000539469 PSME1Q06323 249 aa7.99□□□□□ -1.13
PDZRN4-203ENST00000539469 RRS1Q15050 365 aaKnown RBP7.99□□□□□ -1.13
PDZRN4-203ENST00000539469 SLAIN2Q9P270 581 aa7.99□□□□□ -1.13
PDZRN4-203ENST00000539469 POLKQ9UBT6 870 aa7.99□□□□□ -1.13
PDZRN4-203ENST00000539469 RGPD2P0DJD1 1756 aa7.98□□□□□ -1.13
PDZRN4-203ENST00000539469 GPIHBP1Q8IV16 184 aa7.98□□□□□ -1.13
PDZRN4-203ENST00000539469 A6NJR5 290 aa7.98□□□□□ -1.13
PDZRN4-203ENST00000539469 SOX12O15370 315 aa7.98□□□□□ -1.13
PDZRN4-203ENST00000539469 KRT28Q7Z3Y7 464 aa7.98□□□□□ -1.13
PDZRN4-203ENST00000539469 UBE2Q2Q8WVN8 375 aa7.98□□□□□ -1.13
PDZRN4-203ENST00000539469 PNPLA6Q8IY17 1366 aa7.98□□□□□ -1.13
PDZRN4-203ENST00000539469 C1QBPQ07021 282 aaKnown RBP7.97□□□□□ -1.13
PDZRN4-203ENST00000539469 ABTB2Q8N961 1025 aa7.97□□□□□ -1.13
PDZRN4-203ENST00000539469 PPP4R2Q9NY27 417 aa7.97□□□□□ -1.13
PDZRN4-203ENST00000539469 TNS3Q68CZ2 1445 aa7.97□□□□□ -1.13
PDZRN4-203ENST00000539469 AHDC1Q5TGY3 1603 aaPredicted RBP7.97□□□□□ -1.13
PDZRN4-203ENST00000539469 NLRP6P59044 892 aa7.97□□□□□ -1.13
PDZRN4-203ENST00000539469 RYDENQ9NUL5 291 aaKnown RBP7.97□□□□□ -1.13
PDZRN4-203ENST00000539469 ADAMTS8Q9UP79 889 aa7.97□□□□□ -1.13
PDZRN4-203ENST00000539469 PHLPP1O60346 1717 aa7.97□□□□□ -1.13
PDZRN4-203ENST00000539469 MLLT3P42568 568 aaPredicted RBP7.96□□□□□ -1.13
PDZRN4-203ENST00000539469 LAS1LQ9Y4W2 734 aaKnown RBP7.96□□□□□ -1.13
PDZRN4-203ENST00000539469 NPHP3Q7Z494 1330 aa7.96□□□□□ -1.14
PDZRN4-203ENST00000539469 SBNO1A3KN83 1393 aa7.96□□□□□ -1.14
PDZRN4-203ENST00000539469 COL16A1Q07092 1604 aaPredicted RBP7.96□□□□□ -1.14
PDZRN4-203ENST00000539469 COL18A1P39060 1754 aa7.96□□□□□ -1.14
PDZRN4-203ENST00000539469 INSRP06213 1382 aa7.95□□□□□ -1.14
PDZRN4-203ENST00000539469 MAP3K19Q56UN5 1328 aa7.95□□□□□ -1.14
PDZRN4-203ENST00000539469 IQSEC2Q5JU85 1478 aa7.95□□□□□ -1.14
PDZRN4-203ENST00000539469 USP19O94966 1318 aa7.95□□□□□ -1.14
PDZRN4-203ENST00000539469 MCM6Q14566 821 aa7.95□□□□□ -1.14
PDZRN4-203ENST00000539469 GSE1Q14687 1217 aa7.95□□□□□ -1.14
PDZRN4-203ENST00000539469 SOS2Q07890 1332 aaPredicted RBP7.94□□□□□ -1.14
PDZRN4-203ENST00000539469 SPATA31A3Q5VYP0 1347 aa7.94□□□□□ -1.14
PDZRN4-203ENST00000539469 WDR43Q15061 677 aaKnown RBP eCLIP7.94□□□□□ -1.14
PDZRN4-203ENST00000539469 CCDC146Q8IYE0 955 aa7.94□□□□□ -1.14
PDZRN4-203ENST00000539469 COL22A1Q8NFW1 1626 aaPredicted RBP7.94□□□□□ -1.14
PDZRN4-203ENST00000539469 DLG5Q8TDM6 1919 aa7.94□□□□□ -1.14
PDZRN4-203ENST00000539469 ZBTB47Q9UFB7 747 aaPredicted RBP7.94□□□□□ -1.14
PDZRN4-203ENST00000539469 CAMTA1Q9Y6Y1 1673 aa7.93□□□□□ -1.14
PDZRN4-203ENST00000539469 ANP32AP39687 249 aaKnown RBP7.93□□□□□ -1.14
PDZRN4-203ENST00000539469 HSP90AB2PQ58FF8 381 aa7.93□□□□□ -1.14
PDZRN4-203ENST00000539469 CFAP53Q96M91 514 aa7.93□□□□□ -1.14
PDZRN4-203ENST00000539469 SERPINA10Q9UK55 444 aa7.93□□□□□ -1.14
PDZRN4-203ENST00000539469 UNCXA6NJT0 531 aa7.92□□□□□ -1.14
PDZRN4-203ENST00000539469 IL13P35225 146 aa7.92□□□□□ -1.14
PDZRN4-203ENST00000539469 CABLES1Q8TDN4 633 aa7.92□□□□□ -1.14
PDZRN4-203ENST00000539469 FLT4P35916 1363 aa7.92□□□□□ -1.14
PDZRN4-203ENST00000539469 LMO7Q8WWI1 1683 aa7.92□□□□□ -1.14
PDZRN4-203ENST00000539469 DIAPH1O60610 1272 aaKnown RBP7.92□□□□□ -1.14
PDZRN4-203ENST00000539469 EIF4A2Q14240 407 aaKnown RBP7.92□□□□□ -1.14
PDZRN4-203ENST00000539469 ZBED9Q6R2W3 1325 aa7.91□□□□□ -1.14
PDZRN4-203ENST00000539469 U2SURPO15042 1029 aaKnown RBP7.91□□□□□ -1.14
PDZRN4-203ENST00000539469 GCP02774 474 aa7.91□□□□□ -1.14
PDZRN4-203ENST00000539469 HOXC9P31274 260 aa7.91□□□□□ -1.14
PDZRN4-203ENST00000539469 RTL1A6NKG5 1358 aa7.91□□□□□ -1.14
PDZRN4-203ENST00000539469 ARHGEF10O15013 1369 aa7.91□□□□□ -1.14
PDZRN4-203ENST00000539469 U2AF1L5P0DN76 240 aaPredicted RBP7.9□□□□□ -1.14
PDZRN4-203ENST00000539469 U2AF1Q01081 240 aaKnown RBP eCLIP7.9□□□□□ -1.14
PDZRN4-203ENST00000539469 SMYD5Q6GMV2 418 aa7.9□□□□□ -1.14
PDZRN4-203ENST00000539469 FAM208AQ9UK61 1670 aaKnown RBP7.9□□□□□ -1.14
PDZRN4-203ENST00000539469 PLEKHF1Q96S99 279 aa7.9□□□□□ -1.14
PDZRN4-203ENST00000539469 VIRMAQ69YN4 1812 aaKnown RBP7.89□□□□□ -1.15
PDZRN4-203ENST00000539469 NEFMP07197 916 aa7.89□□□□□ -1.15
PDZRN4-203ENST00000539469 AMPHP49418 695 aa7.89□□□□□ -1.15
PDZRN4-203ENST00000539469 PIP4K2BP78356 416 aa7.89□□□□□ -1.15
PDZRN4-203ENST00000539469 KCNH5Q8NCM2 988 aa7.89□□□□□ -1.15
PDZRN4-203ENST00000539469 IPO9Q96P70 1041 aaKnown RBP7.89□□□□□ -1.15
PDZRN4-203ENST00000539469 KIF24Q5T7B8 1368 aa7.89□□□□□ -1.15
PDZRN4-203ENST00000539469 PPP1R37O75864 691 aa7.89□□□□□ -1.15
PDZRN4-203ENST00000539469 HMOX1P09601 288 aa7.89□□□□□ -1.15
PDZRN4-203ENST00000539469 PYGBP11216 843 aa7.89□□□□□ -1.15
PDZRN4-203ENST00000539469 NUBP1P53384 320 aa7.89□□□□□ -1.15
PDZRN4-203ENST00000539469 ARHGEF25Q86VW2 580 aa7.89□□□□□ -1.15
PDZRN4-203ENST00000539469 AXIN2Q9Y2T1 843 aa7.89□□□□□ -1.15
PDZRN4-203ENST00000539469 PLCH1Q4KWH8 1693 aa7.89□□□□□ -1.15
PDZRN4-203ENST00000539469 ABCC6O95255 1503 aa7.89□□□□□ -1.15
PDZRN4-203ENST00000539469 ZC3H6P61129 1189 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms