RNA–Protein interactions for RNA: ENST00000539271.5

LRTOMT-216, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 4 BASIC

Gene LRTOMT, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-216ENST00000539271 BAG6P46379 1132 aa12.24□□□□□ -0.45
LRTOMT-216ENST00000539271 USHBP1Q8N6Y0 703 aa12.24□□□□□ -0.45
LRTOMT-216ENST00000539271 SHANK3Q9BYB0 1731 aa12.23□□□□□ -0.45
LRTOMT-216ENST00000539271 EIF4A2Q14240 407 aaKnown RBP12.23□□□□□ -0.45
LRTOMT-216ENST00000539271 CC2D1BQ5T0F9 858 aaKnown RBP12.23□□□□□ -0.45
LRTOMT-216ENST00000539271 RNF216Q9NWF9 866 aaPredicted RBP12.23□□□□□ -0.45
LRTOMT-216ENST00000539271 RAPGEF4Q8WZA2 1011 aa12.22□□□□□ -0.45
LRTOMT-216ENST00000539271 EYA1Q99502 592 aa12.22□□□□□ -0.45
LRTOMT-216ENST00000539271 APBA3O96018 575 aa12.21□□□□□ -0.45
LRTOMT-216ENST00000539271 TATP17735 454 aaPredicted RBP12.21□□□□□ -0.45
LRTOMT-216ENST00000539271 EN1Q05925 392 aaPredicted RBP12.21□□□□□ -0.45
LRTOMT-216ENST00000539271 ZCRB1Q8TBF4 217 aaKnown RBP12.21□□□□□ -0.45
LRTOMT-216ENST00000539271 BCL11BQ9C0K0 894 aaPredicted RBP12.21□□□□□ -0.45
LRTOMT-216ENST00000539271 NHSQ6T4R5 1651 aa12.2□□□□□ -0.46
LRTOMT-216ENST00000539271 PTF1AQ7RTS3 328 aa12.2□□□□□ -0.46
LRTOMT-216ENST00000539271 CAMKK2Q96RR4 588 aa12.2□□□□□ -0.46
LRTOMT-216ENST00000539271 PKD1L3Q7Z443 1732 aa12.2□□□□□ -0.46
LRTOMT-216ENST00000539271 PARD3Q8TEW0 1356 aa12.19□□□□□ -0.46
LRTOMT-216ENST00000539271 IGSF1Q8N6C5 1336 aa12.19□□□□□ -0.46
LRTOMT-216ENST00000539271 MTHFSP49914 203 aa12.19□□□□□ -0.46
LRTOMT-216ENST00000539271 DDX54Q8TDD1 881 aaKnown RBP12.19□□□□□ -0.46
LRTOMT-216ENST00000539271 RGPD3A6NKT7 1758 aaPredicted RBP12.19□□□□□ -0.46
LRTOMT-216ENST00000539271 RGPD4Q7Z3J3 1758 aa12.19□□□□□ -0.46
LRTOMT-216ENST00000539271 CNGB1Q14028 1251 aaPredicted RBP12.18□□□□□ -0.46
LRTOMT-216ENST00000539271 EZH2Q15910 746 aaKnown RBP12.18□□□□□ -0.46
LRTOMT-216ENST00000539271 RREB1Q92766 1687 aa12.18□□□□□ -0.46
LRTOMT-216ENST00000539271 KCNQ2O43526 872 aa12.17□□□□□ -0.46
LRTOMT-216ENST00000539271 IL13P35225 146 aa12.17□□□□□ -0.46
LRTOMT-216ENST00000539271 ACSBG1Q96GR2 724 aa12.17□□□□□ -0.46
LRTOMT-216ENST00000539271 PLEKHG2Q9H7P9 1386 aa12.17□□□□□ -0.46
LRTOMT-216ENST00000539271 BTAF1O14981 1849 aa12.16□□□□□ -0.46
LRTOMT-216ENST00000539271 PCDH11XQ9BZA7 1347 aa12.16□□□□□ -0.46
LRTOMT-216ENST00000539271 PCDH11YQ9BZA8 1340 aa12.16□□□□□ -0.46
LRTOMT-216ENST00000539271 PLSCR1O15162 318 aa12.16□□□□□ -0.46
LRTOMT-216ENST00000539271 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.16□□□□□ -0.46
LRTOMT-216ENST00000539271 DOT1LQ8TEK3 1739 aa12.16□□□□□ -0.46
LRTOMT-216ENST00000539271 COL3A1P02461 1466 aaPredicted RBP12.15□□□□□ -0.46
LRTOMT-216ENST00000539271 NUP188Q5SRE5 1749 aa12.15□□□□□ -0.46
LRTOMT-216ENST00000539271 CYP27B1O15528 508 aa12.15□□□□□ -0.46
LRTOMT-216ENST00000539271 KDRP35968 1356 aa12.15□□□□□ -0.46
LRTOMT-216ENST00000539271 AEBP1Q8IUX7 1158 aa12.14□□□□□ -0.47
LRTOMT-216ENST00000539271 SPG7Q9UQ90 795 aa12.14□□□□□ -0.47
LRTOMT-216ENST00000539271 DIAPH1O60610 1272 aaKnown RBP12.13□□□□□ -0.47
LRTOMT-216ENST00000539271 SULT6B1Q6IMI4 303 aa12.13□□□□□ -0.47
LRTOMT-216ENST00000539271 TOGARAM1Q9Y4F4 1720 aa12.12□□□□□ -0.47
LRTOMT-216ENST00000539271 PPP2R1AP30153 589 aa12.12□□□□□ -0.47
LRTOMT-216ENST00000539271 PRIM1P49642 420 aaKnown RBP12.12□□□□□ -0.47
LRTOMT-216ENST00000539271 DDX10Q13206 875 aaKnown RBP12.12□□□□□ -0.47
LRTOMT-216ENST00000539271 NKX1-1Q15270 411 aaPredicted RBP12.12□□□□□ -0.47
LRTOMT-216ENST00000539271 PROM2Q8N271 834 aa12.12□□□□□ -0.47
LRTOMT-216ENST00000539271 ITGB4P16144 1822 aa12.11□□□□□ -0.47
LRTOMT-216ENST00000539271 PSDA5PKW4 1024 aaPredicted RBP12.1□□□□□ -0.47
LRTOMT-216ENST00000539271 PHKG2P15735 406 aa12.1□□□□□ -0.47
LRTOMT-216ENST00000539271 TXNRD1Q16881 649 aa12.1□□□□□ -0.47
LRTOMT-216ENST00000539271 AMOTQ4VCS5 1084 aa12.1□□□□□ -0.47
LRTOMT-216ENST00000539271 PLEKHO1Q53GL0 409 aaPredicted RBP12.1□□□□□ -0.47
LRTOMT-216ENST00000539271 IFNL2Q8IZJ0 200 aa12.1□□□□□ -0.47
LRTOMT-216ENST00000539271 SYTL4Q96C24 671 aaPredicted RBP12.1□□□□□ -0.47
LRTOMT-216ENST00000539271 CFAP53Q96M91 514 aa12.09□□□□□ -0.47
LRTOMT-216ENST00000539271 LY75O60449 1722 aa12.08□□□□□ -0.47
LRTOMT-216ENST00000539271 HMOX1P09601 288 aa12.08□□□□□ -0.48
LRTOMT-216ENST00000539271 R3HDM1Q15032 1099 aaKnown RBP12.08□□□□□ -0.48
LRTOMT-216ENST00000539271 NBPF14Q5TI25 921 aa12.08□□□□□ -0.48
LRTOMT-216ENST00000539271 ZNF530Q6P9A1 599 aaPredicted RBP12.08□□□□□ -0.48
LRTOMT-216ENST00000539271 RALBP1Q15311 655 aa12.07□□□□□ -0.48
LRTOMT-216ENST00000539271 ANO8Q9HCE9 1232 aaPredicted RBP12.07□□□□□ -0.48
LRTOMT-216ENST00000539271 PAPPAQ13219 1627 aa12.07□□□□□ -0.48
LRTOMT-216ENST00000539271 U2SURPO15042 1029 aaKnown RBP12.06□□□□□ -0.48
LRTOMT-216ENST00000539271 HSP90AB1P08238 724 aaKnown RBP12.06□□□□□ -0.48
LRTOMT-216ENST00000539271 MPRIPQ6WCQ1 1025 aa12.06□□□□□ -0.48
LRTOMT-216ENST00000539271 KDM6AO15550 1401 aaPredicted RBP12.05□□□□□ -0.48
LRTOMT-216ENST00000539271 C1orf141Q5JVX7 400 aa12.05□□□□□ -0.48
LRTOMT-216ENST00000539271 SLC27A3Q5K4L6 730 aa12.05□□□□□ -0.48
LRTOMT-216ENST00000539271 PIGBQ92521 554 aa12.05□□□□□ -0.48
LRTOMT-216ENST00000539271 DCAF5Q96JK2 942 aa12.05□□□□□ -0.48
LRTOMT-216ENST00000539271 LRRC4BQ9NT99 713 aa12.05□□□□□ -0.48
LRTOMT-216ENST00000539271 NUDCQ9Y266 331 aa12.05□□□□□ -0.48
LRTOMT-216ENST00000539271 SCN11AQ9UI33 1791 aa12.05□□□□□ -0.48
LRTOMT-216ENST00000539271 VIRMAQ69YN4 1812 aaKnown RBP12.04□□□□□ -0.48
LRTOMT-216ENST00000539271 ERVV-2B6SEH9 535 aa12.04□□□□□ -0.48
LRTOMT-216ENST00000539271 TMOD3Q9NYL9 352 aa12.04□□□□□ -0.48
LRTOMT-216ENST00000539271 ZNF316A6NFI3 1004 aaPredicted RBP12.03□□□□□ -0.48
LRTOMT-216ENST00000539271 MTHFSDQ2M296 383 aaKnown RBP12.03□□□□□ -0.48
LRTOMT-216ENST00000539271 AKAP4Q5JQC9 854 aa12.03□□□□□ -0.48
LRTOMT-216ENST00000539271 SMARCC1Q92922 1105 aaPredicted RBP12.03□□□□□ -0.48
LRTOMT-216ENST00000539271 RSPH6AQ9H0K4 717 aa12.03□□□□□ -0.48
LRTOMT-216ENST00000539271 STK32BQ9NY57 414 aa12.03□□□□□ -0.48
LRTOMT-216ENST00000539271 PALLDQ8WX93 1383 aa12.03□□□□□ -0.48
LRTOMT-216ENST00000539271 LRP5O75197 1615 aa12.02□□□□□ -0.49
LRTOMT-216ENST00000539271 U2AF1L5P0DN76 240 aaPredicted RBP12.02□□□□□ -0.49
LRTOMT-216ENST00000539271 U2AF1Q01081 240 aaKnown RBP eCLIP12.02□□□□□ -0.49
LRTOMT-216ENST00000539271 SLC15A2Q16348 729 aa12.02□□□□□ -0.49
LRTOMT-216ENST00000539271 CCNL1Q9UK58 526 aaPredicted RBP12.02□□□□□ -0.49
LRTOMT-216ENST00000539271 CASZ1Q86V15 1759 aa12.02□□□□□ -0.49
LRTOMT-216ENST00000539271 TAF1LQ8IZX4 1826 aa12.02□□□□□ -0.49
LRTOMT-216ENST00000539271 ADAMTS7Q9UKP4 1686 aa12.01□□□□□ -0.49
LRTOMT-216ENST00000539271 PRKAR2BP31323 418 aa12.01□□□□□ -0.49
LRTOMT-216ENST00000539271 KCNQ4P56696 695 aa12.01□□□□□ -0.49
LRTOMT-216ENST00000539271 ZNF827Q17R98 1081 aa12.01□□□□□ -0.49
LRTOMT-216ENST00000539271 ASAP1Q9ULH1 1129 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms