RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 ZEB1P37275 1124 aaPredicted RBP18.71■□□□□ 0.59
CD9-208ENST00000538834 PTF1AQ7RTS3 328 aa18.71■□□□□ 0.59
CD9-208ENST00000538834 COL3A1P02461 1466 aaPredicted RBP18.71■□□□□ 0.59
CD9-208ENST00000538834 PARD3Q8TEW0 1356 aa18.7■□□□□ 0.58
CD9-208ENST00000538834 BAG6P46379 1132 aa18.7■□□□□ 0.58
CD9-208ENST00000538834 USHBP1Q8N6Y0 703 aa18.7■□□□□ 0.58
CD9-208ENST00000538834 BCL11BQ9C0K0 894 aaPredicted RBP18.7■□□□□ 0.58
CD9-208ENST00000538834 TOGARAM1Q9Y4F4 1720 aa18.7■□□□□ 0.58
CD9-208ENST00000538834 VIRMAQ69YN4 1812 aaKnown RBP18.7■□□□□ 0.58
CD9-208ENST00000538834 PLSCR1O15162 318 aa18.69■□□□□ 0.58
CD9-208ENST00000538834 PPM1GO15355 546 aaPredicted RBP18.69■□□□□ 0.58
CD9-208ENST00000538834 IL13P35225 146 aa18.69■□□□□ 0.58
CD9-208ENST00000538834 SF3B2Q13435 895 aaKnown RBP18.69■□□□□ 0.58
CD9-208ENST00000538834 ZCRB1Q8TBF4 217 aaKnown RBP18.69■□□□□ 0.58
CD9-208ENST00000538834 KDRP35968 1356 aa18.68■□□□□ 0.58
CD9-208ENST00000538834 MTHFSP49914 203 aa18.68■□□□□ 0.58
CD9-208ENST00000538834 CC2D1BQ5T0F9 858 aaKnown RBP18.68■□□□□ 0.58
CD9-208ENST00000538834 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.68■□□□□ 0.58
CD9-208ENST00000538834 LY75O60449 1722 aa18.68■□□□□ 0.58
CD9-208ENST00000538834 EN1Q05925 392 aaPredicted RBP18.67■□□□□ 0.58
CD9-208ENST00000538834 RAPGEF4Q8WZA2 1011 aa18.66■□□□□ 0.58
CD9-208ENST00000538834 APBA3O96018 575 aa18.65■□□□□ 0.58
CD9-208ENST00000538834 TATP17735 454 aaPredicted RBP18.65■□□□□ 0.58
CD9-208ENST00000538834 CYP27B1O15528 508 aa18.64■□□□□ 0.57
CD9-208ENST00000538834 KCNQ2O43526 872 aa18.64■□□□□ 0.57
CD9-208ENST00000538834 NKX1-1Q15270 411 aaPredicted RBP18.64■□□□□ 0.57
CD9-208ENST00000538834 EZH2Q15910 746 aaKnown RBP18.64■□□□□ 0.57
CD9-208ENST00000538834 PROM2Q8N271 834 aa18.63■□□□□ 0.57
CD9-208ENST00000538834 SCN11AQ9UI33 1791 aa18.61■□□□□ 0.57
CD9-208ENST00000538834 PAPPAQ13219 1627 aa18.61■□□□□ 0.57
CD9-208ENST00000538834 PCDH11XQ9BZA7 1347 aa18.61■□□□□ 0.57
CD9-208ENST00000538834 PCDH11YQ9BZA8 1340 aa18.61■□□□□ 0.57
CD9-208ENST00000538834 DDX54Q8TDD1 881 aaKnown RBP18.61■□□□□ 0.57
CD9-208ENST00000538834 TAF1LQ8IZX4 1826 aa18.6■□□□□ 0.57
CD9-208ENST00000538834 ADAMTS7Q9UKP4 1686 aa18.6■□□□□ 0.57
CD9-208ENST00000538834 PPP2R1AP30153 589 aa18.58■□□□□ 0.56
CD9-208ENST00000538834 AEBP1Q8IUX7 1158 aa18.58■□□□□ 0.56
CD9-208ENST00000538834 QSER1Q2KHR3 1735 aa18.57■□□□□ 0.56
CD9-208ENST00000538834 ACSBG1Q96GR2 724 aa18.57■□□□□ 0.56
CD9-208ENST00000538834 SPG7Q9UQ90 795 aa18.57■□□□□ 0.56
CD9-208ENST00000538834 DIAPH1O60610 1272 aaKnown RBP18.56■□□□□ 0.56
CD9-208ENST00000538834 PHKG2P15735 406 aa18.55■□□□□ 0.56
CD9-208ENST00000538834 PRIM1P49642 420 aaKnown RBP18.55■□□□□ 0.56
CD9-208ENST00000538834 SULT6B1Q6IMI4 303 aa18.55■□□□□ 0.56
CD9-208ENST00000538834 ZNF831Q5JPB2 1677 aa18.54■□□□□ 0.56
CD9-208ENST00000538834 TUBGCP6Q96RT7 1819 aa18.54■□□□□ 0.56
CD9-208ENST00000538834 DDX10Q13206 875 aaKnown RBP18.54■□□□□ 0.56
CD9-208ENST00000538834 CASZ1Q86V15 1759 aa18.54■□□□□ 0.56
CD9-208ENST00000538834 TXNRD1Q16881 649 aa18.53■□□□□ 0.56
CD9-208ENST00000538834 AMOTQ4VCS5 1084 aa18.53■□□□□ 0.56
CD9-208ENST00000538834 SRCAPQ6ZRS2 3230 aa18.53■□□□□ 0.56
CD9-208ENST00000538834 IFNL2Q8IZJ0 200 aa18.53■□□□□ 0.56
CD9-208ENST00000538834 KDM6AO15550 1401 aaPredicted RBP18.51■□□□□ 0.55
CD9-208ENST00000538834 PLEKHO1Q53GL0 409 aaPredicted RBP18.51■□□□□ 0.55
CD9-208ENST00000538834 LRP5O75197 1615 aa18.51■□□□□ 0.55
CD9-208ENST00000538834 SIPA1L3O60292 1781 aaPredicted RBP18.5■□□□□ 0.55
CD9-208ENST00000538834 COL24A1Q17RW2 1714 aa18.5■□□□□ 0.55
CD9-208ENST00000538834 LRRC4BQ9NT99 713 aa18.5■□□□□ 0.55
CD9-208ENST00000538834 DLG5Q8TDM6 1919 aa18.49■□□□□ 0.55
CD9-208ENST00000538834 C5P01031 1676 aa18.49■□□□□ 0.55
CD9-208ENST00000538834 RALBP1Q15311 655 aa18.48■□□□□ 0.55
CD9-208ENST00000538834 ANO8Q9HCE9 1232 aaPredicted RBP18.48■□□□□ 0.55
CD9-208ENST00000538834 HMOX1P09601 288 aa18.47■□□□□ 0.55
CD9-208ENST00000538834 CNGB1Q14028 1251 aaPredicted RBP18.47■□□□□ 0.55
CD9-208ENST00000538834 PIGBQ92521 554 aa18.47■□□□□ 0.55
CD9-208ENST00000538834 DCAF5Q96JK2 942 aa18.47■□□□□ 0.55
CD9-208ENST00000538834 CICQ96RK0 1608 aaPredicted RBP18.47■□□□□ 0.55
CD9-208ENST00000538834 MRC1P22897 1456 aa18.46■□□□□ 0.55
CD9-208ENST00000538834 ERVV-2B6SEH9 535 aa18.46■□□□□ 0.55
CD9-208ENST00000538834 SLC27A3Q5K4L6 730 aa18.46■□□□□ 0.55
CD9-208ENST00000538834 HSP90AB1P08238 724 aaKnown RBP18.45■□□□□ 0.54
CD9-208ENST00000538834 R3HDM1Q15032 1099 aaKnown RBP18.45■□□□□ 0.54
CD9-208ENST00000538834 ZNF530Q6P9A1 599 aaPredicted RBP18.45■□□□□ 0.54
CD9-208ENST00000538834 CFAP53Q96M91 514 aa18.45■□□□□ 0.54
CD9-208ENST00000538834 RSPH6AQ9H0K4 717 aa18.45■□□□□ 0.54
CD9-208ENST00000538834 UBR3Q6ZT12 1888 aa18.45■□□□□ 0.54
CD9-208ENST00000538834 COL5A3P25940 1745 aaPredicted RBP18.44■□□□□ 0.54
CD9-208ENST00000538834 MTHFSDQ2M296 383 aaKnown RBP18.44■□□□□ 0.54
CD9-208ENST00000538834 UBR2Q8IWV8 1755 aa18.43■□□□□ 0.54
CD9-208ENST00000538834 MYH14Q7Z406 1995 aaKnown RBP18.43■□□□□ 0.54
CD9-208ENST00000538834 PSDA5PKW4 1024 aaPredicted RBP18.43■□□□□ 0.54
CD9-208ENST00000538834 AKAP4Q5JQC9 854 aa18.43■□□□□ 0.54
CD9-208ENST00000538834 NBPF14Q5TI25 921 aa18.43■□□□□ 0.54
CD9-208ENST00000538834 AKT1S1Q96B36 256 aa18.43■□□□□ 0.54
CD9-208ENST00000538834 SYTL4Q96C24 671 aaPredicted RBP18.43■□□□□ 0.54
CD9-208ENST00000538834 ZNF316A6NFI3 1004 aaPredicted RBP18.42■□□□□ 0.54
CD9-208ENST00000538834 FCHSD2O94868 740 aa18.42■□□□□ 0.54
CD9-208ENST00000538834 SLC15A2Q16348 729 aa18.42■□□□□ 0.54
CD9-208ENST00000538834 MPRIPQ6WCQ1 1025 aa18.42■□□□□ 0.54
CD9-208ENST00000538834 PRKRIP1Q9H875 184 aaPredicted RBP18.41■□□□□ 0.54
CD9-208ENST00000538834 PALLDQ8WX93 1383 aa18.41■□□□□ 0.54
CD9-208ENST00000538834 C4BP0C0L5 1744 aa18.4■□□□□ 0.54
CD9-208ENST00000538834 SMARCC1Q92922 1105 aaPredicted RBP18.4■□□□□ 0.54
CD9-208ENST00000538834 PHACTR3Q96KR7 559 aa18.4■□□□□ 0.54
CD9-208ENST00000538834 ATG3Q9NT62 314 aa18.4■□□□□ 0.54
CD9-208ENST00000538834 NUDCQ9Y266 331 aa18.4■□□□□ 0.54
CD9-208ENST00000538834 U2SURPO15042 1029 aaKnown RBP18.39■□□□□ 0.53
CD9-208ENST00000538834 TMOD3Q9NYL9 352 aa18.39■□□□□ 0.53
CD9-208ENST00000538834 ASAP1Q9ULH1 1129 aa18.39■□□□□ 0.53
CD9-208ENST00000538834 MYBBP1AQ9BQG0 1328 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms