RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, humanhuman

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-205ENST00000538828 MEGF6O75095 1541 aa16.8■□□□□ 0.28
CLTCL1-205ENST00000538828 PPM1GO15355 546 aaPredicted RBP16.78■□□□□ 0.28
CLTCL1-205ENST00000538828 EYA1Q99502 592 aa16.78■□□□□ 0.28
CLTCL1-205ENST00000538828 PCDH11XQ9BZA7 1347 aa16.77■□□□□ 0.28
CLTCL1-205ENST00000538828 PCDH11YQ9BZA8 1340 aa16.77■□□□□ 0.28
CLTCL1-205ENST00000538828 SHANK3Q9BYB0 1731 aa16.77■□□□□ 0.28
CLTCL1-205ENST00000538828 NBPF14Q5TI25 921 aa16.77■□□□□ 0.28
CLTCL1-205ENST00000538828 KAT6BQ8WYB5 2073 aa16.77■□□□□ 0.27
CLTCL1-205ENST00000538828 EIF4A2Q14240 407 aaKnown RBP16.76■□□□□ 0.27
CLTCL1-205ENST00000538828 NUP188Q5SRE5 1749 aa16.76■□□□□ 0.27
CLTCL1-205ENST00000538828 PKD1L3Q7Z443 1732 aa16.76■□□□□ 0.27
CLTCL1-205ENST00000538828 IGSF1Q8N6C5 1336 aa16.75■□□□□ 0.27
CLTCL1-205ENST00000538828 DDX54Q8TDD1 881 aaKnown RBP16.75■□□□□ 0.27
CLTCL1-205ENST00000538828 HMGB2P26583 209 aaKnown RBP16.74■□□□□ 0.27
CLTCL1-205ENST00000538828 TNNT2P45379 298 aaPredicted RBP16.74■□□□□ 0.27
CLTCL1-205ENST00000538828 KCNQ2O43526 872 aa16.73■□□□□ 0.27
CLTCL1-205ENST00000538828 NKX1-1Q15270 411 aaPredicted RBP16.73■□□□□ 0.27
CLTCL1-205ENST00000538828 USHBP1Q8N6Y0 703 aa16.73■□□□□ 0.27
CLTCL1-205ENST00000538828 SPG7Q9UQ90 795 aa16.73■□□□□ 0.27
CLTCL1-205ENST00000538828 PTF1AQ7RTS3 328 aa16.72■□□□□ 0.27
CLTCL1-205ENST00000538828 PROM2Q8N271 834 aa16.72■□□□□ 0.27
CLTCL1-205ENST00000538828 BTAF1O14981 1849 aa16.72■□□□□ 0.27
CLTCL1-205ENST00000538828 SRCAPQ6ZRS2 3230 aa16.71■□□□□ 0.27
CLTCL1-205ENST00000538828 TXNRD1Q16881 649 aa16.71■□□□□ 0.27
CLTCL1-205ENST00000538828 LRP5O75197 1615 aa16.7■□□□□ 0.26
CLTCL1-205ENST00000538828 KDRP35968 1356 aa16.7■□□□□ 0.26
CLTCL1-205ENST00000538828 SLC27A3Q5K4L6 730 aa16.7■□□□□ 0.26
CLTCL1-205ENST00000538828 ACSBG1Q96GR2 724 aa16.7■□□□□ 0.26
CLTCL1-205ENST00000538828 CYP27B1O15528 508 aa16.69■□□□□ 0.26
CLTCL1-205ENST00000538828 IL13P35225 146 aa16.69■□□□□ 0.26
CLTCL1-205ENST00000538828 MTHFSP49914 203 aa16.69■□□□□ 0.26
CLTCL1-205ENST00000538828 AMOTQ4VCS5 1084 aa16.69■□□□□ 0.26
CLTCL1-205ENST00000538828 DOT1LQ8TEK3 1739 aa16.68■□□□□ 0.26
CLTCL1-205ENST00000538828 PRIM1P49642 420 aaKnown RBP16.68■□□□□ 0.26
CLTCL1-205ENST00000538828 R3HDM1Q15032 1099 aaKnown RBP16.68■□□□□ 0.26
CLTCL1-205ENST00000538828 IFNL2Q8IZJ0 200 aa16.67■□□□□ 0.26
CLTCL1-205ENST00000538828 CC2D1BQ5T0F9 858 aaKnown RBP16.66■□□□□ 0.26
CLTCL1-205ENST00000538828 LY75O60449 1722 aa16.65■□□□□ 0.26
CLTCL1-205ENST00000538828 PSDA5PKW4 1024 aaPredicted RBP16.65■□□□□ 0.26
CLTCL1-205ENST00000538828 HSP90AB1P08238 724 aaKnown RBP16.65■□□□□ 0.26
CLTCL1-205ENST00000538828 PLEKHO1Q53GL0 409 aaPredicted RBP16.65■□□□□ 0.26
CLTCL1-205ENST00000538828 PAPPAQ13219 1627 aa16.64■□□□□ 0.25
CLTCL1-205ENST00000538828 PHKG2P15735 406 aa16.64■□□□□ 0.25
CLTCL1-205ENST00000538828 ZEB1P37275 1124 aaPredicted RBP16.64■□□□□ 0.25
CLTCL1-205ENST00000538828 DIAPH1O60610 1272 aaKnown RBP16.63■□□□□ 0.25
CLTCL1-205ENST00000538828 SLC15A2Q16348 729 aa16.63■□□□□ 0.25
CLTCL1-205ENST00000538828 SMARCC1Q92922 1105 aaPredicted RBP16.63■□□□□ 0.25
CLTCL1-205ENST00000538828 SYTL4Q96C24 671 aaPredicted RBP16.63■□□□□ 0.25
CLTCL1-205ENST00000538828 STK32BQ9NY57 414 aa16.63■□□□□ 0.25
CLTCL1-205ENST00000538828 ITGB4P16144 1822 aa16.62■□□□□ 0.25
CLTCL1-205ENST00000538828 ANO8Q9HCE9 1232 aaPredicted RBP16.62■□□□□ 0.25
CLTCL1-205ENST00000538828 ERVV-2B6SEH9 535 aa16.61■□□□□ 0.25
CLTCL1-205ENST00000538828 SULT6B1Q6IMI4 303 aa16.61■□□□□ 0.25
CLTCL1-205ENST00000538828 DCAF5Q96JK2 942 aa16.61■□□□□ 0.25
CLTCL1-205ENST00000538828 COL3A1P02461 1466 aaPredicted RBP16.61■□□□□ 0.25
CLTCL1-205ENST00000538828 QSER1Q2KHR3 1735 aa16.6■□□□□ 0.25
CLTCL1-205ENST00000538828 TOGARAM1Q9Y4F4 1720 aa16.6■□□□□ 0.25
CLTCL1-205ENST00000538828 LRRC4BQ9NT99 713 aa16.6■□□□□ 0.25
CLTCL1-205ENST00000538828 CASZ1Q86V15 1759 aa16.59■□□□□ 0.25
CLTCL1-205ENST00000538828 CFAP53Q96M91 514 aa16.59■□□□□ 0.25
CLTCL1-205ENST00000538828 AEBP1Q8IUX7 1158 aa16.58■□□□□ 0.24
CLTCL1-205ENST00000538828 AKT1S1Q96B36 256 aa16.58■□□□□ 0.24
CLTCL1-205ENST00000538828 SPON1Q9HCB6 807 aa16.58■□□□□ 0.24
CLTCL1-205ENST00000538828 PALLDQ8WX93 1383 aa16.57■□□□□ 0.24
CLTCL1-205ENST00000538828 ZNF530Q6P9A1 599 aaPredicted RBP16.57■□□□□ 0.24
CLTCL1-205ENST00000538828 MPRIPQ6WCQ1 1025 aa16.57■□□□□ 0.24
CLTCL1-205ENST00000538828 SLC16A10Q8TF71 515 aa16.57■□□□□ 0.24
CLTCL1-205ENST00000538828 PIGBQ92521 554 aa16.57■□□□□ 0.24
CLTCL1-205ENST00000538828 TMOD3Q9NYL9 352 aa16.57■□□□□ 0.24
CLTCL1-205ENST00000538828 C1orf141Q5JVX7 400 aa16.56■□□□□ 0.24
CLTCL1-205ENST00000538828 CCNL1Q9UK58 526 aaPredicted RBP16.56■□□□□ 0.24
CLTCL1-205ENST00000538828 PPP2R1AP30153 589 aa16.55■□□□□ 0.24
CLTCL1-205ENST00000538828 AKAP4Q5JQC9 854 aa16.55■□□□□ 0.24
CLTCL1-205ENST00000538828 NUDCQ9Y266 331 aa16.55■□□□□ 0.24
CLTCL1-205ENST00000538828 ZNF831Q5JPB2 1677 aa16.55■□□□□ 0.24
CLTCL1-205ENST00000538828 MTFR1LQ9H019 292 aa16.53■□□□□ 0.24
CLTCL1-205ENST00000538828 TAF1LQ8IZX4 1826 aa16.53■□□□□ 0.24
CLTCL1-205ENST00000538828 KDM6AO15550 1401 aaPredicted RBP16.53■□□□□ 0.24
CLTCL1-205ENST00000538828 ZNF827Q17R98 1081 aa16.52■□□□□ 0.24
CLTCL1-205ENST00000538828 FLAD1Q8NFF5 587 aa16.52■□□□□ 0.24
CLTCL1-205ENST00000538828 SCN11AQ9UI33 1791 aa16.51■□□□□ 0.23
CLTCL1-205ENST00000538828 ADAMTS7Q9UKP4 1686 aa16.51■□□□□ 0.23
CLTCL1-205ENST00000538828 LOC102724428A0A0B4J2F2 783 aa16.51■□□□□ 0.23
CLTCL1-205ENST00000538828 SIK1P57059 783 aa16.51■□□□□ 0.23
CLTCL1-205ENST00000538828 RALBP1Q15311 655 aa16.51■□□□□ 0.23
CLTCL1-205ENST00000538828 C5P01031 1676 aa16.5■□□□□ 0.23
CLTCL1-205ENST00000538828 FCHSD2O94868 740 aa16.5■□□□□ 0.23
CLTCL1-205ENST00000538828 HMOX1P09601 288 aa16.5■□□□□ 0.23
CLTCL1-205ENST00000538828 CABP4P57796 275 aa16.5■□□□□ 0.23
CLTCL1-205ENST00000538828 GAS2L2Q8NHY3 880 aa16.5■□□□□ 0.23
CLTCL1-205ENST00000538828 ATG3Q9NT62 314 aa16.5■□□□□ 0.23
CLTCL1-205ENST00000538828 U2SURPO15042 1029 aaKnown RBP16.49■□□□□ 0.23
CLTCL1-205ENST00000538828 COL24A1Q17RW2 1714 aa16.49■□□□□ 0.23
CLTCL1-205ENST00000538828 TFCP2L1Q9NZI6 479 aa16.49■□□□□ 0.23
CLTCL1-205ENST00000538828 ASAP1Q9ULH1 1129 aa16.49■□□□□ 0.23
CLTCL1-205ENST00000538828 MRC1P22897 1456 aa16.48■□□□□ 0.23
CLTCL1-205ENST00000538828 PNPLA7Q6ZV29 1317 aa16.48■□□□□ 0.23
CLTCL1-205ENST00000538828 MTHFSDQ2M296 383 aaKnown RBP16.48■□□□□ 0.23
CLTCL1-205ENST00000538828 SGIP1Q9BQI5 828 aa16.48■□□□□ 0.23
CLTCL1-205ENST00000538828 PTGER2P43116 358 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms