RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 FOXO3O43524 673 aa17.44■□□□□ 0.38
CLPB-209ENST00000538039 API5Q9BZZ5 524 aaKnown RBP17.44■□□□□ 0.38
CLPB-209ENST00000538039 RBM27Q9P2N5 1060 aaKnown RBP17.44■□□□□ 0.38
CLPB-209ENST00000538039 EDC4Q6P2E9 1401 aaKnown RBP17.44■□□□□ 0.38
CLPB-209ENST00000538039 F6X3S4 739 aa17.44■□□□□ 0.38
CLPB-209ENST00000538039 MLECQ14165 292 aa17.44■□□□□ 0.38
CLPB-209ENST00000538039 LMBRD1Q9NUN5 540 aa17.44■□□□□ 0.38
CLPB-209ENST00000538039 RTL1A6NKG5 1358 aa17.43■□□□□ 0.38
CLPB-209ENST00000538039 SOX12O15370 315 aa17.42■□□□□ 0.38
CLPB-209ENST00000538039 HSP90AB2PQ58FF8 381 aa17.42■□□□□ 0.38
CLPB-209ENST00000538039 FOXD4L5Q5VV16 416 aaPredicted RBP17.42■□□□□ 0.38
CLPB-209ENST00000538039 FOXD4L4Q8WXT5 416 aaPredicted RBP17.42■□□□□ 0.38
CLPB-209ENST00000538039 COG3Q96JB2 828 aa17.42■□□□□ 0.38
CLPB-209ENST00000538039 NRXN3Q9Y4C0 1643 aa17.41■□□□□ 0.38
CLPB-209ENST00000538039 CAVIN1Q6NZI2 390 aaKnown RBP17.41■□□□□ 0.38
CLPB-209ENST00000538039 GPT2Q8TD30 523 aa17.41■□□□□ 0.38
CLPB-209ENST00000538039 CHL1O00533 1208 aa17.41■□□□□ 0.38
CLPB-209ENST00000538039 CALD1Q05682 793 aaKnown RBP17.41■□□□□ 0.38
CLPB-209ENST00000538039 KLHL40Q2TBA0 621 aa17.41■□□□□ 0.38
CLPB-209ENST00000538039 SKOR2Q2VWA4 1001 aaPredicted RBP17.41■□□□□ 0.38
CLPB-209ENST00000538039 AATKQ6ZMQ8 1374 aa17.41■□□□□ 0.38
CLPB-209ENST00000538039 NASPP49321 788 aaPredicted RBP17.4■□□□□ 0.38
CLPB-209ENST00000538039 RABEP1Q15276 862 aa17.4■□□□□ 0.38
CLPB-209ENST00000538039 RBSNQ9H1K0 784 aa17.4■□□□□ 0.38
CLPB-209ENST00000538039 NCLP19338 710 aaKnown RBP17.39■□□□□ 0.38
CLPB-209ENST00000538039 ZSCAN23Q3MJ62 389 aa17.39■□□□□ 0.37
CLPB-209ENST00000538039 DLC1Q96QB1 1528 aa17.39■□□□□ 0.37
CLPB-209ENST00000538039 SLC4A2P04920 1241 aa17.38■□□□□ 0.37
CLPB-209ENST00000538039 ISY1Q9ULR0 285 aaKnown RBP17.38■□□□□ 0.37
CLPB-209ENST00000538039 PRPF40AO75400 957 aaKnown RBP17.38■□□□□ 0.37
CLPB-209ENST00000538039 PPP1R9BQ96SB3 815 aa17.38■□□□□ 0.37
CLPB-209ENST00000538039 RIMS1Q86UR5 1692 aaKnown RBP17.37■□□□□ 0.37
CLPB-209ENST00000538039 PRIM1P49642 420 aaKnown RBP17.37■□□□□ 0.37
CLPB-209ENST00000538039 CCDC61Q9Y6R9 512 aa17.37■□□□□ 0.37
CLPB-209ENST00000538039 TRIM44Q96DX7 344 aaPredicted RBP17.37■□□□□ 0.37
CLPB-209ENST00000538039 CHMP4BQ9H444 224 aaKnown RBP17.37■□□□□ 0.37
CLPB-209ENST00000538039 C3P01024 1663 aa17.36■□□□□ 0.37
CLPB-209ENST00000538039 PEAK1Q9H792 1746 aa17.36■□□□□ 0.37
CLPB-209ENST00000538039 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.36■□□□□ 0.37
CLPB-209ENST00000538039 PALD1Q9ULE6 856 aa17.36■□□□□ 0.37
CLPB-209ENST00000538039 EXOC6BQ9Y2D4 811 aa17.36■□□□□ 0.37
CLPB-209ENST00000538039 MON2Q7Z3U7 1717 aa17.36■□□□□ 0.37
CLPB-209ENST00000538039 SLC4A10Q6U841 1118 aa17.36■□□□□ 0.37
CLPB-209ENST00000538039 IL25Q9H293 177 aa17.35■□□□□ 0.37
CLPB-209ENST00000538039 CRB1P82279 1406 aa17.35■□□□□ 0.37
CLPB-209ENST00000538039 LMOD3Q0VAK6 560 aa17.34■□□□□ 0.37
CLPB-209ENST00000538039 RPAP2Q8IXW5 612 aaPredicted RBP17.34■□□□□ 0.37
CLPB-209ENST00000538039 TMEM63CQ9P1W3 806 aa17.34■□□□□ 0.37
CLPB-209ENST00000538039 KIF24Q5T7B8 1368 aa17.34■□□□□ 0.37
CLPB-209ENST00000538039 PDE1AP54750 535 aa17.33■□□□□ 0.37
CLPB-209ENST00000538039 ZNF445P59923 1031 aa17.33■□□□□ 0.37
CLPB-209ENST00000538039 NOL8Q76FK4 1167 aaKnown RBP17.33■□□□□ 0.37
CLPB-209ENST00000538039 NECTIN2Q92692 538 aa17.33■□□□□ 0.37
CLPB-209ENST00000538039 UNC5CLQ8IV45 518 aa17.33■□□□□ 0.36
CLPB-209ENST00000538039 PNMA6EA0A0J9YXQ4 647 aa17.32■□□□□ 0.36
CLPB-209ENST00000538039 REREQ9P2R6 1566 aa17.32■□□□□ 0.36
CLPB-209ENST00000538039 MTHFSDQ2M296 383 aaKnown RBP17.32■□□□□ 0.36
CLPB-209ENST00000538039 ROBO2Q9HCK4 1378 aa17.32■□□□□ 0.36
CLPB-209ENST00000538039 DTNBO60941 627 aa17.32■□□□□ 0.36
CLPB-209ENST00000538039 CCDC173Q0VFZ6 552 aa17.32■□□□□ 0.36
CLPB-209ENST00000538039 AKAP12Q02952 1782 aa17.31■□□□□ 0.36
CLPB-209ENST00000538039 MAP3K19Q56UN5 1328 aa17.31■□□□□ 0.36
CLPB-209ENST00000538039 TTC21BQ7Z4L5 1316 aa17.31■□□□□ 0.36
CLPB-209ENST00000538039 FOXD4L6Q3SYB3 417 aaPredicted RBP17.31■□□□□ 0.36
CLPB-209ENST00000538039 FOXD4L3Q6VB84 417 aaPredicted RBP17.31■□□□□ 0.36
CLPB-209ENST00000538039 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.31■□□□□ 0.36
CLPB-209ENST00000538039 ACEP12821 1306 aa17.3■□□□□ 0.36
CLPB-209ENST00000538039 GOLGA6L22H0YM25 854 aa17.3■□□□□ 0.36
CLPB-209ENST00000538039 IBTKQ9P2D0 1353 aaPredicted RBP17.3■□□□□ 0.36
CLPB-209ENST00000538039 SALL3Q9BXA9 1300 aa17.3■□□□□ 0.36
CLPB-209ENST00000538039 NRKQ7Z2Y5 1582 aa17.3■□□□□ 0.36
CLPB-209ENST00000538039 NEK4P51957 841 aa17.3■□□□□ 0.36
CLPB-209ENST00000538039 NUCB2P80303 420 aa17.3■□□□□ 0.36
CLPB-209ENST00000538039 TMX3Q96JJ7 454 aa17.3■□□□□ 0.36
CLPB-209ENST00000538039 SYCE3A1L190 88 aa17.29■□□□□ 0.36
CLPB-209ENST00000538039 CYB5RLQ6IPT4 315 aa17.29■□□□□ 0.36
CLPB-209ENST00000538039 ERC2O15083 957 aa17.29■□□□□ 0.36
CLPB-209ENST00000538039 KIAA1211Q6ZU35 1233 aa17.29■□□□□ 0.36
CLPB-209ENST00000538039 TSPOAP1O95153 1857 aa17.28■□□□□ 0.36
CLPB-209ENST00000538039 KIAA0232Q92628 1395 aa17.28■□□□□ 0.36
CLPB-209ENST00000538039 ZSCAN30Q86W11 494 aa17.28■□□□□ 0.36
CLPB-209ENST00000538039 HSP90AA2PQ14568 343 aaPredicted RBP17.28■□□□□ 0.36
CLPB-209ENST00000538039 SPATA31D1Q6ZQQ2 1576 aa17.28■□□□□ 0.36
CLPB-209ENST00000538039 FAM69CQ0P6D2 419 aa17.27■□□□□ 0.36
CLPB-209ENST00000538039 PTPRCP08575 1304 aa17.27■□□□□ 0.36
CLPB-209ENST00000538039 TUBGCP6Q96RT7 1819 aa17.27■□□□□ 0.36
CLPB-209ENST00000538039 GDPD2Q9HCC8 539 aa17.27■□□□□ 0.36
CLPB-209ENST00000538039 RGPD1P0DJD0 1748 aa17.27■□□□□ 0.35
CLPB-209ENST00000538039 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.27■□□□□ 0.35
CLPB-209ENST00000538039 ST18O60284 1047 aa17.26■□□□□ 0.35
CLPB-209ENST00000538039 PTMSP20962 102 aa17.26■□□□□ 0.35
CLPB-209ENST00000538039 OSBPL3Q9H4L5 887 aa17.26■□□□□ 0.35
CLPB-209ENST00000538039 OVOS2A0A0J9YW53 1432 aa17.26■□□□□ 0.35
CLPB-209ENST00000538039 OVOS2Q6IE36 1432 aa17.26■□□□□ 0.35
CLPB-209ENST00000538039 ITSN1Q15811 1721 aa17.26■□□□□ 0.35
CLPB-209ENST00000538039 RNF214Q8ND24 703 aa17.26■□□□□ 0.35
CLPB-209ENST00000538039 PDLIM2Q96JY6 352 aa17.26■□□□□ 0.35
CLPB-209ENST00000538039 UPF3BQ9BZI7 483 aaKnown RBP17.26■□□□□ 0.35
CLPB-209ENST00000538039 XPCQ01831 940 aaPredicted RBP17.25■□□□□ 0.35
CLPB-209ENST00000538039 ESYT1Q9BSJ8 1104 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms