RNA–Protein interactions for RNA: ENST00000537619.6

PTPRR-205, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best)

Gene PTPRR, Length 1,927 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-205ENST00000537619 PHF8Q9UPP1 1060 aa11.8□□□□□ -0.52
PTPRR-205ENST00000537619 NFAT5O94916 1531 aa11.8□□□□□ -0.52
PTPRR-205ENST00000537619 NUCB1Q02818 461 aa11.79□□□□□ -0.52
PTPRR-205ENST00000537619 ABTB2Q8N961 1025 aa11.78□□□□□ -0.52
PTPRR-205ENST00000537619 API5Q9BZZ5 524 aaKnown RBP11.78□□□□□ -0.52
PTPRR-205ENST00000537619 NPHP4O75161 1426 aaPredicted RBP11.78□□□□□ -0.52
PTPRR-205ENST00000537619 MSH6P52701 1360 aa11.77□□□□□ -0.52
PTPRR-205ENST00000537619 KIF24Q5T7B8 1368 aa11.77□□□□□ -0.52
PTPRR-205ENST00000537619 LNPKQ9C0E8 428 aa11.77□□□□□ -0.53
PTPRR-205ENST00000537619 TBC1D32Q96NH3 1257 aa11.76□□□□□ -0.53
PTPRR-205ENST00000537619 CHD1LQ86WJ1 897 aa11.76□□□□□ -0.53
PTPRR-205ENST00000537619 LTV1Q96GA3 475 aaPredicted RBP11.76□□□□□ -0.53
PTPRR-205ENST00000537619 LTN1O94822 1766 aa11.76□□□□□ -0.53
PTPRR-205ENST00000537619 RTL1A6NKG5 1358 aa11.76□□□□□ -0.53
PTPRR-205ENST00000537619 ATP10DQ9P241 1426 aa11.75□□□□□ -0.53
PTPRR-205ENST00000537619 INTS3Q68E01 1043 aaKnown RBP11.75□□□□□ -0.53
PTPRR-205ENST00000537619 USHBP1Q8N6Y0 703 aa11.75□□□□□ -0.53
PTPRR-205ENST00000537619 GAS2L2Q8NHY3 880 aa11.75□□□□□ -0.53
PTPRR-205ENST00000537619 TSPYL4Q9UJ04 414 aa11.75□□□□□ -0.53
PTPRR-205ENST00000537619 G2E3Q7L622 706 aa11.74□□□□□ -0.53
PTPRR-205ENST00000537619 C14orf37Q86TY3 774 aa11.74□□□□□ -0.53
PTPRR-205ENST00000537619 SETD1BQ9UPS6 1966 aaKnown RBP11.74□□□□□ -0.53
PTPRR-205ENST00000537619 ESCO1Q5FWF5 840 aa11.73□□□□□ -0.53
PTPRR-205ENST00000537619 IL17REQ8NFR9 667 aa11.73□□□□□ -0.53
PTPRR-205ENST00000537619 RTF1Q92541 710 aaKnown RBP11.73□□□□□ -0.53
PTPRR-205ENST00000537619 MAP3K5Q99683 1374 aa11.72□□□□□ -0.53
PTPRR-205ENST00000537619 DEKP35659 375 aaKnown RBP11.72□□□□□ -0.53
PTPRR-205ENST00000537619 ANKRD45Q5TZF3 282 aa11.72□□□□□ -0.53
PTPRR-205ENST00000537619 IP6K1Q92551 441 aa11.72□□□□□ -0.53
PTPRR-205ENST00000537619 GCC1Q96CN9 775 aa11.72□□□□□ -0.53
PTPRR-205ENST00000537619 ORAI2Q96SN7 254 aa11.72□□□□□ -0.53
PTPRR-205ENST00000537619 CHMP4BQ9H444 224 aaKnown RBP11.72□□□□□ -0.53
PTPRR-205ENST00000537619 FAM208AQ9UK61 1670 aaKnown RBP11.72□□□□□ -0.53
PTPRR-205ENST00000537619 HTATSF1O43719 755 aaKnown RBP11.72□□□□□ -0.53
PTPRR-205ENST00000537619 PTPRCP08575 1304 aa11.71□□□□□ -0.53
PTPRR-205ENST00000537619 PHRF1Q9P1Y6 1649 aaKnown RBP11.71□□□□□ -0.53
PTPRR-205ENST00000537619 GNAT3A8MTJ3 354 aa11.71□□□□□ -0.53
PTPRR-205ENST00000537619 SLC4A2P04920 1241 aa11.71□□□□□ -0.53
PTPRR-205ENST00000537619 MFAP1P55081 439 aaKnown RBP11.71□□□□□ -0.53
PTPRR-205ENST00000537619 XPCQ01831 940 aaPredicted RBP11.71□□□□□ -0.53
PTPRR-205ENST00000537619 NBPF6Q5VWK0 638 aa11.71□□□□□ -0.53
PTPRR-205ENST00000537619 NBPF4Q96M43 638 aa11.71□□□□□ -0.53
PTPRR-205ENST00000537619 MEIS3Q99687 375 aa11.71□□□□□ -0.53
PTPRR-205ENST00000537619 SLIT3O75094 1523 aa11.71□□□□□ -0.54
PTPRR-205ENST00000537619 MED1Q15648 1581 aaPredicted RBP11.7□□□□□ -0.54
PTPRR-205ENST00000537619 RGPD2P0DJD1 1756 aa11.7□□□□□ -0.54
PTPRR-205ENST00000537619 TRPM3Q9HCF6 1732 aaPredicted RBP11.7□□□□□ -0.54
PTPRR-205ENST00000537619 F6X3S4 739 aa11.7□□□□□ -0.54
PTPRR-205ENST00000537619 HAP1P54257 671 aaPredicted RBP11.7□□□□□ -0.54
PTPRR-205ENST00000537619 PSME1Q06323 249 aa11.7□□□□□ -0.54
PTPRR-205ENST00000537619 RTL5Q5HYW3 569 aaPredicted RBP11.7□□□□□ -0.54
PTPRR-205ENST00000537619 CEP85Q6P2H3 762 aa11.7□□□□□ -0.54
PTPRR-205ENST00000537619 ANKRD44Q8N8A2 993 aa11.7□□□□□ -0.54
PTPRR-205ENST00000537619 DAXXQ9UER7 740 aaPredicted RBP11.7□□□□□ -0.54
PTPRR-205ENST00000537619 NFKBIBQ15653 356 aa11.69□□□□□ -0.54
PTPRR-205ENST00000537619 BMP2KLQ5H9B9 411 aa11.68□□□□□ -0.54
PTPRR-205ENST00000537619 LRRC59Q96AG4 307 aaKnown RBP11.68□□□□□ -0.54
PTPRR-205ENST00000537619 TBC1D2Q9BYX2 928 aa11.68□□□□□ -0.54
PTPRR-205ENST00000537619 C22orf23Q9BZE7 217 aa11.68□□□□□ -0.54
PTPRR-205ENST00000537619 DCTPP1Q9H773 170 aa11.68□□□□□ -0.54
PTPRR-205ENST00000537619 UPF2Q9HAU5 1272 aaKnown RBP11.68□□□□□ -0.54
PTPRR-205ENST00000537619 CEMIPQ8WUJ3 1361 aa11.68□□□□□ -0.54
PTPRR-205ENST00000537619 NCAPD2Q15021 1401 aa11.68□□□□□ -0.54
PTPRR-205ENST00000537619 C1orf167Q5SNV9 1468 aa11.67□□□□□ -0.54
PTPRR-205ENST00000537619 ZBTB7CA1YPR0 619 aa11.67□□□□□ -0.54
PTPRR-205ENST00000537619 NECTIN2Q92692 538 aa11.67□□□□□ -0.54
PTPRR-205ENST00000537619 PXDNQ92626 1479 aa11.67□□□□□ -0.54
PTPRR-205ENST00000537619 GSPT1P15170 499 aaKnown RBP11.66□□□□□ -0.54
PTPRR-205ENST00000537619 TAF7Q15545 349 aaPredicted RBP11.66□□□□□ -0.54
PTPRR-205ENST00000537619 ARHGEF25Q86VW2 580 aa11.66□□□□□ -0.54
PTPRR-205ENST00000537619 LGR6Q9HBX8 967 aa11.66□□□□□ -0.54
PTPRR-205ENST00000537619 USP35Q9P2H5 1018 aa11.66□□□□□ -0.54
PTPRR-205ENST00000537619 PLEKHG5O94827 1062 aa11.66□□□□□ -0.54
PTPRR-205ENST00000537619 GCP02774 474 aa11.66□□□□□ -0.54
PTPRR-205ENST00000537619 PLEKHM2Q8IWE5 1019 aa11.66□□□□□ -0.54
PTPRR-205ENST00000537619 C16orf71Q8IYS4 520 aaPredicted RBP11.66□□□□□ -0.54
PTPRR-205ENST00000537619 KCNH5Q8NCM2 988 aa11.66□□□□□ -0.54
PTPRR-205ENST00000537619 OTUD7AQ8TE49 926 aaPredicted RBP11.66□□□□□ -0.54
PTPRR-205ENST00000537619 ANTXR1Q9H6X2 564 aa11.66□□□□□ -0.54
PTPRR-205ENST00000537619 CAMTA1Q9Y6Y1 1673 aa11.66□□□□□ -0.54
PTPRR-205ENST00000537619 LMO7Q8WWI1 1683 aa11.65□□□□□ -0.54
PTPRR-205ENST00000537619 FLIIQ13045 1269 aa11.65□□□□□ -0.54
PTPRR-205ENST00000537619 BECN1Q14457 450 aa11.65□□□□□ -0.54
PTPRR-205ENST00000537619 SLC4A10Q6U841 1118 aa11.65□□□□□ -0.54
PTPRR-205ENST00000537619 PROSER2Q86WR7 435 aaPredicted RBP11.65□□□□□ -0.54
PTPRR-205ENST00000537619 STRCP1A6NGW2 1772 aa11.65□□□□□ -0.54
PTPRR-205ENST00000537619 KDM3BQ7LBC6 1761 aa11.65□□□□□ -0.54
PTPRR-205ENST00000537619 SMARCA5O60264 1052 aaPredicted RBP11.64□□□□□ -0.55
PTPRR-205ENST00000537619 TBC1D9Q6ZT07 1266 aa11.64□□□□□ -0.55
PTPRR-205ENST00000537619 RPAP2Q8IXW5 612 aaPredicted RBP11.64□□□□□ -0.55
PTPRR-205ENST00000537619 KCNQ3O43525 872 aa11.64□□□□□ -0.55
PTPRR-205ENST00000537619 CCDC30Q5VVM6 783 aa11.64□□□□□ -0.55
PTPRR-205ENST00000537619 SLKQ9H2G2 1235 aaPredicted RBP11.64□□□□□ -0.55
PTPRR-205ENST00000537619 BABAM1Q9NWV8 329 aa11.64□□□□□ -0.55
PTPRR-205ENST00000537619 AXIN2Q9Y2T1 843 aa11.64□□□□□ -0.55
PTPRR-205ENST00000537619 N4BP2Q86UW6 1770 aaPredicted RBP11.64□□□□□ -0.55
PTPRR-205ENST00000537619 KIF1AQ12756 1690 aa11.64□□□□□ -0.55
PTPRR-205ENST00000537619 ALS2Q96Q42 1657 aa11.63□□□□□ -0.55
PTPRR-205ENST00000537619 FRAT2O75474 233 aaPredicted RBP11.63□□□□□ -0.55
PTPRR-205ENST00000537619 RBM25P49756 843 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms