RNA–Protein interactions for RNA: ENST00000537568.1

LMO3-216, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 594 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-216ENST00000537568 GPCPD1Q9NPB8 672 aa12.57□□□□□ -0.4
LMO3-216ENST00000537568 BCL9LQ86UU0 1499 aa12.57□□□□□ -0.4
LMO3-216ENST00000537568 SCAF11Q99590 1463 aaKnown RBP12.57□□□□□ -0.4
LMO3-216ENST00000537568 PREX2Q70Z35 1606 aa12.56□□□□□ -0.4
LMO3-216ENST00000537568 SENP3-EIF4A1A0A087X0R7 540 aa12.56□□□□□ -0.4
LMO3-216ENST00000537568 SLC19A1P41440 591 aa12.56□□□□□ -0.4
LMO3-216ENST00000537568 LAPTM4AQ15012 233 aa12.56□□□□□ -0.4
LMO3-216ENST00000537568 ARID3AQ99856 593 aa12.56□□□□□ -0.4
LMO3-216ENST00000537568 TIAM1Q13009 1591 aa12.56□□□□□ -0.4
LMO3-216ENST00000537568 INO80Q9ULG1 1556 aaPredicted RBP12.56□□□□□ -0.4
LMO3-216ENST00000537568 HRCP23327 699 aa12.55□□□□□ -0.4
LMO3-216ENST00000537568 CLCN1P35523 988 aa12.55□□□□□ -0.4
LMO3-216ENST00000537568 NWD1Q149M9 1564 aa12.55□□□□□ -0.4
LMO3-216ENST00000537568 PRDM15P57071 1507 aaPredicted RBP12.54□□□□□ -0.4
LMO3-216ENST00000537568 FMNL1O95466 1100 aaPredicted RBP12.54□□□□□ -0.4
LMO3-216ENST00000537568 RANGAP1P46060 587 aaPredicted RBP12.54□□□□□ -0.4
LMO3-216ENST00000537568 CCDC125Q86Z20 511 aa12.54□□□□□ -0.4
LMO3-216ENST00000537568 AHDC1Q5TGY3 1603 aaPredicted RBP12.54□□□□□ -0.4
LMO3-216ENST00000537568 NCOA2Q15596 1464 aa12.53□□□□□ -0.4
LMO3-216ENST00000537568 ARHGAP23Q9P227 1491 aa12.53□□□□□ -0.4
LMO3-216ENST00000537568 KDM4AO75164 1064 aa12.53□□□□□ -0.4
LMO3-216ENST00000537568 GRIPAP1Q4V328 841 aa12.53□□□□□ -0.4
LMO3-216ENST00000537568 PLA2G2CQ5R387 149 aa12.53□□□□□ -0.4
LMO3-216ENST00000537568 RNF19BQ6ZMZ0 732 aa12.53□□□□□ -0.4
LMO3-216ENST00000537568 DEFB132Q7Z7B7 95 aa12.53□□□□□ -0.4
LMO3-216ENST00000537568 FAM217BQ9NTX9 383 aaPredicted RBP12.53□□□□□ -0.4
LMO3-216ENST00000537568 SYCP2Q9BX26 1530 aa12.52□□□□□ -0.4
LMO3-216ENST00000537568 KCNA6P17658 529 aa12.52□□□□□ -0.41
LMO3-216ENST00000537568 LIAT1Q6ZQX7 453 aa12.52□□□□□ -0.41
LMO3-216ENST00000537568 FAM160A2Q8N612 972 aaPredicted RBP12.52□□□□□ -0.41
LMO3-216ENST00000537568 REPIN1Q9BWE0 567 aaKnown RBP12.52□□□□□ -0.41
LMO3-216ENST00000537568 SALL2Q9Y467 1007 aaPredicted RBP12.52□□□□□ -0.41
LMO3-216ENST00000537568 SPRYD7Q5W111 196 aa12.51□□□□□ -0.41
LMO3-216ENST00000537568 BRICD5Q6PL45 260 aa12.51□□□□□ -0.41
LMO3-216ENST00000537568 PROSER2Q86WR7 435 aaPredicted RBP12.51□□□□□ -0.41
LMO3-216ENST00000537568 NRG2O14511 850 aaPredicted RBP12.5□□□□□ -0.41
LMO3-216ENST00000537568 HNRNPMP52272 730 aaKnown RBP eCLIP12.5□□□□□ -0.41
LMO3-216ENST00000537568 C8orf37Q96NL8 207 aa12.5□□□□□ -0.41
LMO3-216ENST00000537568 PRDM9Q9NQV7 894 aa12.5□□□□□ -0.41
LMO3-216ENST00000537568 PDZRN3Q9UPQ7 1066 aa12.5□□□□□ -0.41
LMO3-216ENST00000537568 SLIT1O75093 1534 aa12.49□□□□□ -0.41
LMO3-216ENST00000537568 MSH6P52701 1360 aa12.49□□□□□ -0.41
LMO3-216ENST00000537568 PLEKHG3A1L390 1219 aa12.49□□□□□ -0.41
LMO3-216ENST00000537568 HLA-CQ95604 372 aa12.49□□□□□ -0.41
LMO3-216ENST00000537568 DDRGK1Q96HY6 314 aa12.49□□□□□ -0.41
LMO3-216ENST00000537568 TXNDC2Q86VQ3 553 aa12.48□□□□□ -0.41
LMO3-216ENST00000537568 NGLY1Q96IV0 654 aa12.48□□□□□ -0.41
LMO3-216ENST00000537568 TRIM67Q6ZTA4 783 aa12.47□□□□□ -0.41
LMO3-216ENST00000537568 FCF1Q9Y324 198 aaKnown RBP12.47□□□□□ -0.41
LMO3-216ENST00000537568 UBR1Q8IWV7 1749 aa12.46□□□□□ -0.41
LMO3-216ENST00000537568 LCE2BO14633 110 aa12.46□□□□□ -0.41
LMO3-216ENST00000537568 HOXA2O43364 376 aa12.46□□□□□ -0.41
LMO3-216ENST00000537568 USP46P62068 366 aa12.46□□□□□ -0.41
LMO3-216ENST00000537568 ZNF598Q86UK7 904 aaKnown RBP12.46□□□□□ -0.41
LMO3-216ENST00000537568 PARP9Q8IXQ6 854 aa12.46□□□□□ -0.41
LMO3-216ENST00000537568 MAST1Q9Y2H9 1570 aa12.46□□□□□ -0.42
LMO3-216ENST00000537568 ABCC3O15438 1527 aa12.46□□□□□ -0.42
LMO3-216ENST00000537568 NKTRP30414 1462 aaKnown RBP12.46□□□□□ -0.42
LMO3-216ENST00000537568 BLMP54132 1417 aaPredicted RBP12.45□□□□□ -0.42
LMO3-216ENST00000537568 TTLL12Q14166 644 aaPredicted RBP12.45□□□□□ -0.42
LMO3-216ENST00000537568 Q3C1V9 767 aa12.45□□□□□ -0.42
LMO3-216ENST00000537568 MSS51Q4VC12 460 aa12.45□□□□□ -0.42
LMO3-216ENST00000537568 CDK11AQ9UQ88 783 aaPredicted RBP12.45□□□□□ -0.42
LMO3-216ENST00000537568 CLIP1P30622 1438 aa12.45□□□□□ -0.42
LMO3-216ENST00000537568 KDM5AP29375 1690 aaKnown RBP12.45□□□□□ -0.42
LMO3-216ENST00000537568 AMHR2Q16671 573 aa12.44□□□□□ -0.42
LMO3-216ENST00000537568 ZNF697Q5TEC3 545 aa12.44□□□□□ -0.42
LMO3-216ENST00000537568 C1orf115Q9H7X2 142 aa12.44□□□□□ -0.42
LMO3-216ENST00000537568 C1QTNF8P60827 252 aa12.43□□□□□ -0.42
LMO3-216ENST00000537568 GUCA2AQ02747 115 aa12.43□□□□□ -0.42
LMO3-216ENST00000537568 ZNF784Q8NCA9 323 aaPredicted RBP12.43□□□□□ -0.42
LMO3-216ENST00000537568 DHX29Q7Z478 1369 aaKnown RBP12.43□□□□□ -0.42
LMO3-216ENST00000537568 CDC42BPAQ5VT25 1732 aa12.42□□□□□ -0.42
LMO3-216ENST00000537568 WASHC2CQ9Y4E1 1318 aa12.42□□□□□ -0.42
LMO3-216ENST00000537568 TET3O43151 1660 aa12.42□□□□□ -0.42
LMO3-216ENST00000537568 ERVK-7P63135 1459 aa12.42□□□□□ -0.42
LMO3-216ENST00000537568 SSTR3P32745 418 aaPredicted RBP12.42□□□□□ -0.42
LMO3-216ENST00000537568 ZNF777Q9ULD5 760 aaPredicted RBP12.42□□□□□ -0.42
LMO3-216ENST00000537568 ATRNO75882 1429 aa12.42□□□□□ -0.42
LMO3-216ENST00000537568 SETD5Q9C0A6 1442 aa12.42□□□□□ -0.42
LMO3-216ENST00000537568 ADGBQ8N7X0 1667 aa12.42□□□□□ -0.42
LMO3-216ENST00000537568 KIF3BO15066 747 aa12.41□□□□□ -0.42
LMO3-216ENST00000537568 TRIM26Q12899 539 aaPredicted RBP12.41□□□□□ -0.42
LMO3-216ENST00000537568 SLC26A8Q96RN1 970 aa12.41□□□□□ -0.42
LMO3-216ENST00000537568 KIAA1107Q9UPP5 1409 aa12.41□□□□□ -0.42
LMO3-216ENST00000537568 FLIIQ13045 1269 aa12.4□□□□□ -0.42
LMO3-216ENST00000537568 TRAF7Q6Q0C0 670 aa12.4□□□□□ -0.42
LMO3-216ENST00000537568 BRINP3Q76B58 766 aa12.4□□□□□ -0.42
LMO3-216ENST00000537568 NUTM1Q86Y26 1132 aa12.4□□□□□ -0.42
LMO3-216ENST00000537568 USB1Q9BQ65 265 aaKnown RBP12.4□□□□□ -0.42
LMO3-216ENST00000537568 ATP1B4Q9UN42 357 aaPredicted RBP12.4□□□□□ -0.42
LMO3-216ENST00000537568 APBB1O00213 710 aa12.39□□□□□ -0.43
LMO3-216ENST00000537568 GIGYF2Q6Y7W6 1299 aaKnown RBP12.39□□□□□ -0.43
LMO3-216ENST00000537568 LRRIQ1Q96JM4 1722 aa12.38□□□□□ -0.43
LMO3-216ENST00000537568 TNFRSF10AO00220 468 aa12.38□□□□□ -0.43
LMO3-216ENST00000537568 PRR20EP86478 221 aa12.38□□□□□ -0.43
LMO3-216ENST00000537568 PRR20CP86479 221 aa12.38□□□□□ -0.43
LMO3-216ENST00000537568 PRR20DP86480 221 aa12.38□□□□□ -0.43
LMO3-216ENST00000537568 PRR20BP86481 221 aa12.38□□□□□ -0.43
LMO3-216ENST00000537568 PRR20AP86496 221 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms