RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 DAXXQ9UER7 740 aaPredicted RBP19.77■□□□□ 0.75
MKS1-204ENST00000537529 FOXO3O43524 673 aa19.76■□□□□ 0.75
MKS1-204ENST00000537529 ESCO1Q5FWF5 840 aa19.76■□□□□ 0.75
MKS1-204ENST00000537529 RBM33Q96EV2 1170 aaKnown RBP19.76■□□□□ 0.75
MKS1-204ENST00000537529 PSME1Q06323 249 aa19.75■□□□□ 0.75
MKS1-204ENST00000537529 NFAT5O94916 1531 aa19.75■□□□□ 0.75
MKS1-204ENST00000537529 LRRC37A3O60309 1634 aa19.75■□□□□ 0.75
MKS1-204ENST00000537529 UPF2Q9HAU5 1272 aaKnown RBP19.74■□□□□ 0.75
MKS1-204ENST00000537529 NUCB1Q02818 461 aa19.74■□□□□ 0.75
MKS1-204ENST00000537529 KRT24Q2M2I5 525 aa19.74■□□□□ 0.75
MKS1-204ENST00000537529 TSPYL4Q9UJ04 414 aa19.74■□□□□ 0.75
MKS1-204ENST00000537529 PTPRCP08575 1304 aa19.73■□□□□ 0.75
MKS1-204ENST00000537529 USP19O94966 1318 aa19.72■□□□□ 0.75
MKS1-204ENST00000537529 KCNH5Q8NCM2 988 aa19.72■□□□□ 0.75
MKS1-204ENST00000537529 GCC1Q96CN9 775 aa19.72■□□□□ 0.75
MKS1-204ENST00000537529 LTN1O94822 1766 aa19.72■□□□□ 0.75
MKS1-204ENST00000537529 GNAT3A8MTJ3 354 aa19.72■□□□□ 0.75
MKS1-204ENST00000537529 NBR1Q14596 966 aa19.72■□□□□ 0.75
MKS1-204ENST00000537529 INTS3Q68E01 1043 aaKnown RBP19.72■□□□□ 0.75
MKS1-204ENST00000537529 IP6K1Q92551 441 aa19.72■□□□□ 0.75
MKS1-204ENST00000537529 SEC24BO95487 1268 aa19.71■□□□□ 0.75
MKS1-204ENST00000537529 LTV1Q96GA3 475 aaPredicted RBP19.71■□□□□ 0.75
MKS1-204ENST00000537529 MAP3K5Q99683 1374 aa19.71■□□□□ 0.75
MKS1-204ENST00000537529 RGS12O14924 1447 aa19.7■□□□□ 0.74
MKS1-204ENST00000537529 CHD1LQ86WJ1 897 aa19.7■□□□□ 0.74
MKS1-204ENST00000537529 C1orf115Q9H7X2 142 aa19.7■□□□□ 0.74
MKS1-204ENST00000537529 PHRF1Q9P1Y6 1649 aaKnown RBP19.69■□□□□ 0.74
MKS1-204ENST00000537529 MIS18AQ9NYP9 233 aa19.69■□□□□ 0.74
MKS1-204ENST00000537529 RTL5Q5HYW3 569 aaPredicted RBP19.67■□□□□ 0.74
MKS1-204ENST00000537529 BABAM1Q9NWV8 329 aa19.67■□□□□ 0.74
MKS1-204ENST00000537529 MSH6P52701 1360 aa19.67■□□□□ 0.74
MKS1-204ENST00000537529 PROSER2Q86WR7 435 aaPredicted RBP19.66■□□□□ 0.74
MKS1-204ENST00000537529 LNPKQ9C0E8 428 aa19.66■□□□□ 0.74
MKS1-204ENST00000537529 SLIT3O75094 1523 aa19.66■□□□□ 0.74
MKS1-204ENST00000537529 SOS1Q07889 1333 aaPredicted RBP19.65■□□□□ 0.74
MKS1-204ENST00000537529 KIF1AQ12756 1690 aa19.65■□□□□ 0.74
MKS1-204ENST00000537529 SLC4A2P04920 1241 aa19.65■□□□□ 0.74
MKS1-204ENST00000537529 SIRT2Q8IXJ6 389 aa19.65■□□□□ 0.74
MKS1-204ENST00000537529 TBC1D32Q96NH3 1257 aa19.65■□□□□ 0.74
MKS1-204ENST00000537529 ORAI2Q96SN7 254 aa19.65■□□□□ 0.74
MKS1-204ENST00000537529 SLC4A3P48751 1232 aa19.64■□□□□ 0.74
MKS1-204ENST00000537529 ANKRD45Q5TZF3 282 aa19.64■□□□□ 0.74
MKS1-204ENST00000537529 USHBP1Q8N6Y0 703 aa19.64■□□□□ 0.73
MKS1-204ENST00000537529 STK31Q9BXU1 1019 aa19.63■□□□□ 0.73
MKS1-204ENST00000537529 BECN1Q14457 450 aa19.63■□□□□ 0.73
MKS1-204ENST00000537529 ZBTB7CA1YPR0 619 aa19.62■□□□□ 0.73
MKS1-204ENST00000537529 TAF7Q15545 349 aaPredicted RBP19.62■□□□□ 0.73
MKS1-204ENST00000537529 IL17REQ8NFR9 667 aa19.62■□□□□ 0.73
MKS1-204ENST00000537529 C1orf167Q5SNV9 1468 aa19.62■□□□□ 0.73
MKS1-204ENST00000537529 TRPM3Q9HCF6 1732 aaPredicted RBP19.61■□□□□ 0.73
MKS1-204ENST00000537529 CCDC30Q5VVM6 783 aa19.61■□□□□ 0.73
MKS1-204ENST00000537529 NBPF6Q5VWK0 638 aa19.61■□□□□ 0.73
MKS1-204ENST00000537529 ANKRD44Q8N8A2 993 aa19.61■□□□□ 0.73
MKS1-204ENST00000537529 NBPF4Q96M43 638 aa19.61■□□□□ 0.73
MKS1-204ENST00000537529 ATP10DQ9P241 1426 aa19.61■□□□□ 0.73
MKS1-204ENST00000537529 FAM208AQ9UK61 1670 aaKnown RBP19.6■□□□□ 0.73
MKS1-204ENST00000537529 GCP02774 474 aa19.6■□□□□ 0.73
MKS1-204ENST00000537529 CCT4P50991 539 aaKnown RBP19.6■□□□□ 0.73
MKS1-204ENST00000537529 RPAP2Q8IXW5 612 aaPredicted RBP19.6■□□□□ 0.73
MKS1-204ENST00000537529 C19orf44Q9H6X5 657 aa19.6■□□□□ 0.73
MKS1-204ENST00000537529 XPCQ01831 940 aaPredicted RBP19.6■□□□□ 0.73
MKS1-204ENST00000537529 BMP2KLQ5H9B9 411 aa19.6■□□□□ 0.73
MKS1-204ENST00000537529 USP35Q9P2H5 1018 aa19.6■□□□□ 0.73
MKS1-204ENST00000537529 ARHGEF25Q86VW2 580 aa19.59■□□□□ 0.73
MKS1-204ENST00000537529 CEMIPQ8WUJ3 1361 aa19.58■□□□□ 0.73
MKS1-204ENST00000537529 KRT28Q7Z3Y7 464 aa19.58■□□□□ 0.73
MKS1-204ENST00000537529 DCTPP1Q9H773 170 aa19.58■□□□□ 0.73
MKS1-204ENST00000537529 G2E3Q7L622 706 aa19.58■□□□□ 0.72
MKS1-204ENST00000537529 MED1Q15648 1581 aaPredicted RBP19.57■□□□□ 0.72
MKS1-204ENST00000537529 MST1RQ04912 1400 aa19.57■□□□□ 0.72
MKS1-204ENST00000537529 NCAPD2Q15021 1401 aa19.57■□□□□ 0.72
MKS1-204ENST00000537529 MFAP1P55081 439 aaKnown RBP19.57■□□□□ 0.72
MKS1-204ENST00000537529 CEP85Q6P2H3 762 aa19.57■□□□□ 0.72
MKS1-204ENST00000537529 LMOD2Q6P5Q4 547 aa19.57■□□□□ 0.72
MKS1-204ENST00000537529 DNAJC5Q9H3Z4 198 aa19.57■□□□□ 0.72
MKS1-204ENST00000537529 MEIS3Q99687 375 aa19.56■□□□□ 0.72
MKS1-204ENST00000537529 PLEKHO1Q53GL0 409 aaPredicted RBP19.55■□□□□ 0.72
MKS1-204ENST00000537529 C22orf23Q9BZE7 217 aa19.55■□□□□ 0.72
MKS1-204ENST00000537529 LMO7Q8WWI1 1683 aa19.55■□□□□ 0.72
MKS1-204ENST00000537529 DCCP43146 1447 aa19.55■□□□□ 0.72
MKS1-204ENST00000537529 FLIIQ13045 1269 aa19.55■□□□□ 0.72
MKS1-204ENST00000537529 AMOTQ4VCS5 1084 aa19.55■□□□□ 0.72
MKS1-204ENST00000537529 SLC4A10Q6U841 1118 aa19.55■□□□□ 0.72
MKS1-204ENST00000537529 LRRC59Q96AG4 307 aaKnown RBP19.55■□□□□ 0.72
MKS1-204ENST00000537529 AKAP4Q5JQC9 854 aa19.54■□□□□ 0.72
MKS1-204ENST00000537529 NCOA3Q9Y6Q9 1424 aa19.54■□□□□ 0.72
MKS1-204ENST00000537529 F6X3S4 739 aa19.53■□□□□ 0.72
MKS1-204ENST00000537529 ATF3P18847 181 aa19.53■□□□□ 0.72
MKS1-204ENST00000537529 ZNF530Q6P9A1 599 aaPredicted RBP19.53■□□□□ 0.72
MKS1-204ENST00000537529 ANKRD24Q8TF21 1146 aa19.53■□□□□ 0.72
MKS1-204ENST00000537529 CAMTA1Q9Y6Y1 1673 aa19.53■□□□□ 0.72
MKS1-204ENST00000537529 HMMRO75330 724 aa19.53■□□□□ 0.72
MKS1-204ENST00000537529 RGPD2P0DJD1 1756 aa19.53■□□□□ 0.72
MKS1-204ENST00000537529 FKBP5Q13451 457 aaPredicted RBP19.52■□□□□ 0.72
MKS1-204ENST00000537529 TMEM94Q12767 1356 aa19.52■□□□□ 0.72
MKS1-204ENST00000537529 PXDNLA1KZ92 1463 aa19.52■□□□□ 0.72
MKS1-204ENST00000537529 ALS2Q96Q42 1657 aa19.52■□□□□ 0.72
MKS1-204ENST00000537529 OVOS2A0A0G2JMS6 1433 aa19.52■□□□□ 0.71
MKS1-204ENST00000537529 CHMP4AQ9BY43 222 aa19.52■□□□□ 0.71
MKS1-204ENST00000537529 HDGFL1Q5TGJ6 251 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms