RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 API5Q9BZZ5 524 aaKnown RBP11.8□□□□□ -0.52
UBE3B-207ENST00000537063 PHF8Q9UPP1 1060 aa11.8□□□□□ -0.52
UBE3B-207ENST00000537063 MST1RQ04912 1400 aa11.8□□□□□ -0.52
UBE3B-207ENST00000537063 MTHFSDQ2M296 383 aaKnown RBP11.79□□□□□ -0.52
UBE3B-207ENST00000537063 NLRP6P59044 892 aa11.79□□□□□ -0.52
UBE3B-207ENST00000537063 LMO7Q8WWI1 1683 aa11.79□□□□□ -0.52
UBE3B-207ENST00000537063 NUCB1Q02818 461 aa11.79□□□□□ -0.52
UBE3B-207ENST00000537063 MCM10Q7L590 875 aa11.79□□□□□ -0.52
UBE3B-207ENST00000537063 NCAPD2Q15021 1401 aa11.79□□□□□ -0.52
UBE3B-207ENST00000537063 CACNA1FO60840 1977 aa11.78□□□□□ -0.52
UBE3B-207ENST00000537063 AMPHP49418 695 aa11.78□□□□□ -0.52
UBE3B-207ENST00000537063 SEC24BO95487 1268 aa11.78□□□□□ -0.52
UBE3B-207ENST00000537063 GAS2L2Q8NHY3 880 aa11.78□□□□□ -0.52
UBE3B-207ENST00000537063 INTS3Q68E01 1043 aaKnown RBP11.78□□□□□ -0.52
UBE3B-207ENST00000537063 MSH6P52701 1360 aa11.77□□□□□ -0.52
UBE3B-207ENST00000537063 RGPD2P0DJD1 1756 aa11.77□□□□□ -0.53
UBE3B-207ENST00000537063 KDM3BQ7LBC6 1761 aa11.77□□□□□ -0.53
UBE3B-207ENST00000537063 ELL2O00472 640 aaPredicted RBP11.77□□□□□ -0.53
UBE3B-207ENST00000537063 PTPRCP08575 1304 aa11.76□□□□□ -0.53
UBE3B-207ENST00000537063 ALS2Q96Q42 1657 aa11.76□□□□□ -0.53
UBE3B-207ENST00000537063 ABTB2Q8N961 1025 aa11.76□□□□□ -0.53
UBE3B-207ENST00000537063 ATP10DQ9P241 1426 aa11.76□□□□□ -0.53
UBE3B-207ENST00000537063 SOX12O15370 315 aa11.76□□□□□ -0.53
UBE3B-207ENST00000537063 FOXO3O43524 673 aa11.76□□□□□ -0.53
UBE3B-207ENST00000537063 GCC1Q96CN9 775 aa11.76□□□□□ -0.53
UBE3B-207ENST00000537063 LMTK3Q96Q04 1460 aa11.76□□□□□ -0.53
UBE3B-207ENST00000537063 SIRT2Q8IXJ6 389 aa11.75□□□□□ -0.53
UBE3B-207ENST00000537063 MAP3K5Q99683 1374 aa11.75□□□□□ -0.53
UBE3B-207ENST00000537063 SOS1Q07889 1333 aaPredicted RBP11.75□□□□□ -0.53
UBE3B-207ENST00000537063 TBC1D32Q96NH3 1257 aa11.75□□□□□ -0.53
UBE3B-207ENST00000537063 KRT24Q2M2I5 525 aa11.74□□□□□ -0.53
UBE3B-207ENST00000537063 BABAM1Q9NWV8 329 aa11.74□□□□□ -0.53
UBE3B-207ENST00000537063 IP6K1Q92551 441 aa11.74□□□□□ -0.53
UBE3B-207ENST00000537063 STRCP1A6NGW2 1772 aa11.74□□□□□ -0.53
UBE3B-207ENST00000537063 ADAMTS7Q9UKP4 1686 aa11.74□□□□□ -0.53
UBE3B-207ENST00000537063 CHD1LQ86WJ1 897 aa11.74□□□□□ -0.53
UBE3B-207ENST00000537063 CEMIPQ8WUJ3 1361 aa11.73□□□□□ -0.53
UBE3B-207ENST00000537063 RTF1Q92541 710 aaKnown RBP11.73□□□□□ -0.53
UBE3B-207ENST00000537063 GNAT3A8MTJ3 354 aa11.72□□□□□ -0.53
UBE3B-207ENST00000537063 NUTM2GQ5VZR2 741 aa11.72□□□□□ -0.53
UBE3B-207ENST00000537063 CRYBG1Q9Y4K1 1723 aa11.72□□□□□ -0.53
UBE3B-207ENST00000537063 KCNH5Q8NCM2 988 aa11.72□□□□□ -0.53
UBE3B-207ENST00000537063 USP35Q9P2H5 1018 aa11.72□□□□□ -0.53
UBE3B-207ENST00000537063 SIPA1L3O60292 1781 aaPredicted RBP11.72□□□□□ -0.53
UBE3B-207ENST00000537063 PXDNLA1KZ92 1463 aa11.72□□□□□ -0.53
UBE3B-207ENST00000537063 TSPYL4Q9UJ04 414 aa11.71□□□□□ -0.53
UBE3B-207ENST00000537063 C1orf167Q5SNV9 1468 aa11.71□□□□□ -0.53
UBE3B-207ENST00000537063 OVOS2A0A0G2JMS6 1433 aa11.71□□□□□ -0.53
UBE3B-207ENST00000537063 DCCP43146 1447 aa11.71□□□□□ -0.54
UBE3B-207ENST00000537063 C1orf115Q9H7X2 142 aa11.71□□□□□ -0.54
UBE3B-207ENST00000537063 BMP2KLQ5H9B9 411 aa11.7□□□□□ -0.54
UBE3B-207ENST00000537063 ABCC6O95255 1503 aa11.7□□□□□ -0.54
UBE3B-207ENST00000537063 NCOA3Q9Y6Q9 1424 aa11.7□□□□□ -0.54
UBE3B-207ENST00000537063 NBR1Q14596 966 aa11.7□□□□□ -0.54
UBE3B-207ENST00000537063 ESCO1Q5FWF5 840 aa11.7□□□□□ -0.54
UBE3B-207ENST00000537063 IL17REQ8NFR9 667 aa11.69□□□□□ -0.54
UBE3B-207ENST00000537063 ANKRD44Q8N8A2 993 aa11.69□□□□□ -0.54
UBE3B-207ENST00000537063 UPF2Q9HAU5 1272 aaKnown RBP11.69□□□□□ -0.54
UBE3B-207ENST00000537063 RBM33Q96EV2 1170 aaKnown RBP11.69□□□□□ -0.54
UBE3B-207ENST00000537063 DCTPP1Q9H773 170 aa11.69□□□□□ -0.54
UBE3B-207ENST00000537063 RGPD5Q99666 1765 aa11.68□□□□□ -0.54
UBE3B-207ENST00000537063 PSME1Q06323 249 aa11.68□□□□□ -0.54
UBE3B-207ENST00000537063 LNPKQ9C0E8 428 aa11.68□□□□□ -0.54
UBE3B-207ENST00000537063 MIS18AQ9NYP9 233 aa11.68□□□□□ -0.54
UBE3B-207ENST00000537063 TUBGCP6Q96RT7 1819 aa11.68□□□□□ -0.54
UBE3B-207ENST00000537063 SLC4A3P48751 1232 aa11.68□□□□□ -0.54
UBE3B-207ENST00000537063 COL18A1P39060 1754 aa11.68□□□□□ -0.54
UBE3B-207ENST00000537063 RPAP2Q8IXW5 612 aaPredicted RBP11.68□□□□□ -0.54
UBE3B-207ENST00000537063 SLC4A2P04920 1241 aa11.67□□□□□ -0.54
UBE3B-207ENST00000537063 NBPF6Q5VWK0 638 aa11.67□□□□□ -0.54
UBE3B-207ENST00000537063 CEP85Q6P2H3 762 aa11.67□□□□□ -0.54
UBE3B-207ENST00000537063 ARHGEF25Q86VW2 580 aa11.67□□□□□ -0.54
UBE3B-207ENST00000537063 NBPF4Q96M43 638 aa11.67□□□□□ -0.54
UBE3B-207ENST00000537063 ORAI2Q96SN7 254 aa11.67□□□□□ -0.54
UBE3B-207ENST00000537063 TAF7Q15545 349 aaPredicted RBP11.67□□□□□ -0.54
UBE3B-207ENST00000537063 G2E3Q7L622 706 aa11.66□□□□□ -0.54
UBE3B-207ENST00000537063 DAXXQ9UER7 740 aaPredicted RBP11.66□□□□□ -0.54
UBE3B-207ENST00000537063 XIRP1Q702N8 1843 aaKnown RBP11.66□□□□□ -0.54
UBE3B-207ENST00000537063 CCT4P50991 539 aaKnown RBP11.66□□□□□ -0.54
UBE3B-207ENST00000537063 ANKRD45Q5TZF3 282 aa11.66□□□□□ -0.54
UBE3B-207ENST00000537063 PXDNQ92626 1479 aa11.66□□□□□ -0.54
UBE3B-207ENST00000537063 BECN1Q14457 450 aa11.66□□□□□ -0.54
UBE3B-207ENST00000537063 GCP02774 474 aa11.65□□□□□ -0.54
UBE3B-207ENST00000537063 RBM25P49756 843 aaKnown RBP11.65□□□□□ -0.54
UBE3B-207ENST00000537063 CCDC30Q5VVM6 783 aa11.65□□□□□ -0.54
UBE3B-207ENST00000537063 C14orf37Q86TY3 774 aa11.65□□□□□ -0.54
UBE3B-207ENST00000537063 USHBP1Q8N6Y0 703 aa11.65□□□□□ -0.54
UBE3B-207ENST00000537063 RTL5Q5HYW3 569 aaPredicted RBP11.65□□□□□ -0.55
UBE3B-207ENST00000537063 LTV1Q96GA3 475 aaPredicted RBP11.65□□□□□ -0.55
UBE3B-207ENST00000537063 MEIS3Q99687 375 aa11.65□□□□□ -0.55
UBE3B-207ENST00000537063 C22orf23Q9BZE7 217 aa11.65□□□□□ -0.55
UBE3B-207ENST00000537063 C19orf44Q9H6X5 657 aa11.65□□□□□ -0.55
UBE3B-207ENST00000537063 PLEKHG2Q9H7P9 1386 aa11.64□□□□□ -0.55
UBE3B-207ENST00000537063 HOXB7P09629 217 aa11.64□□□□□ -0.55
UBE3B-207ENST00000537063 SCN11AQ9UI33 1791 aa11.63□□□□□ -0.55
UBE3B-207ENST00000537063 STK31Q9BXU1 1019 aa11.63□□□□□ -0.55
UBE3B-207ENST00000537063 FLIIQ13045 1269 aa11.63□□□□□ -0.55
UBE3B-207ENST00000537063 AKAP4Q5JQC9 854 aa11.63□□□□□ -0.55
UBE3B-207ENST00000537063 PROSER2Q86WR7 435 aaPredicted RBP11.63□□□□□ -0.55
UBE3B-207ENST00000537063 PLEKHM2Q8IWE5 1019 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms