RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 KIAA2012Q0VF49 1180 aa19.14■□□□□ 0.66
CHFR-213ENST00000536843 TBC1D9Q6ZT07 1266 aa19.14■□□□□ 0.66
CHFR-213ENST00000536843 ATP7BP35670 1465 aa19.14■□□□□ 0.66
CHFR-213ENST00000536843 KIF20BQ96Q89 1820 aa19.14■□□□□ 0.65
CHFR-213ENST00000536843 LETM1O95202 739 aaPredicted RBP19.14■□□□□ 0.65
CHFR-213ENST00000536843 NRXN3Q9Y4C0 1643 aa19.14■□□□□ 0.65
CHFR-213ENST00000536843 GPT2Q8TD30 523 aa19.13■□□□□ 0.65
CHFR-213ENST00000536843 CEBPAP49715 358 aaPredicted RBP19.13■□□□□ 0.65
CHFR-213ENST00000536843 ZNF710Q8N1W2 664 aa19.13■□□□□ 0.65
CHFR-213ENST00000536843 HMGN5P82970 282 aaKnown RBP19.12■□□□□ 0.65
CHFR-213ENST00000536843 IL16Q14005 1332 aa19.12■□□□□ 0.65
CHFR-213ENST00000536843 RABEP1Q15276 862 aa19.12■□□□□ 0.65
CHFR-213ENST00000536843 PPP4R3BQ5MIZ7 849 aa19.12■□□□□ 0.65
CHFR-213ENST00000536843 PPIP5K1Q6PFW1 1433 aa19.11■□□□□ 0.65
CHFR-213ENST00000536843 FCHSD2O94868 740 aa19.11■□□□□ 0.65
CHFR-213ENST00000536843 NME9Q86XW9 330 aa19.11■□□□□ 0.65
CHFR-213ENST00000536843 TMEM57Q8N5G2 664 aa19.11■□□□□ 0.65
CHFR-213ENST00000536843 SSH1Q8WYL5 1049 aa19.11■□□□□ 0.65
CHFR-213ENST00000536843 ZRANB1Q9UGI0 708 aa19.11■□□□□ 0.65
CHFR-213ENST00000536843 NCKAP5LQ9HCH0 1330 aa19.11■□□□□ 0.65
CHFR-213ENST00000536843 NUDT16Q96DE0 195 aaKnown RBP19.11■□□□□ 0.65
CHFR-213ENST00000536843 CWC22Q9HCG8 908 aaKnown RBP19.11■□□□□ 0.65
CHFR-213ENST00000536843 RBM27Q9P2N5 1060 aaKnown RBP19.1■□□□□ 0.65
CHFR-213ENST00000536843 CPSF1Q10570 1443 aaKnown RBP19.1■□□□□ 0.65
CHFR-213ENST00000536843 PRKAR2BP31323 418 aa19.1■□□□□ 0.65
CHFR-213ENST00000536843 HDGFP51858 240 aaKnown RBP19.1■□□□□ 0.65
CHFR-213ENST00000536843 TMEM63CQ9P1W3 806 aa19.09■□□□□ 0.65
CHFR-213ENST00000536843 EMILIN1Q9Y6C2 1016 aa19.09■□□□□ 0.65
CHFR-213ENST00000536843 AK9Q5TCS8 1911 aa19.09■□□□□ 0.65
CHFR-213ENST00000536843 PRPF40AO75400 957 aaKnown RBP19.09■□□□□ 0.65
CHFR-213ENST00000536843 NOB1Q9ULX3 412 aaKnown RBP19.08■□□□□ 0.64
CHFR-213ENST00000536843 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.08■□□□□ 0.64
CHFR-213ENST00000536843 UBR1Q8IWV7 1749 aa19.08■□□□□ 0.64
CHFR-213ENST00000536843 EDC4Q6P2E9 1401 aaKnown RBP19.08■□□□□ 0.64
CHFR-213ENST00000536843 GCC1Q96CN9 775 aa19.08■□□□□ 0.64
CHFR-213ENST00000536843 SYCE3A1L190 88 aa19.07■□□□□ 0.64
CHFR-213ENST00000536843 HMOX1P09601 288 aa19.07■□□□□ 0.64
CHFR-213ENST00000536843 SIRT1Q96EB6 747 aa19.07■□□□□ 0.64
CHFR-213ENST00000536843 ADAMTSL3P82987 1691 aa19.07■□□□□ 0.64
CHFR-213ENST00000536843 CDC45O75419 566 aa19.06■□□□□ 0.64
CHFR-213ENST00000536843 CBX1P83916 185 aa19.06■□□□□ 0.64
CHFR-213ENST00000536843 PKP1Q13835 747 aa19.06■□□□□ 0.64
CHFR-213ENST00000536843 LRRC7Q96NW7 1537 aa19.06■□□□□ 0.64
CHFR-213ENST00000536843 CDC42BPGQ6DT37 1551 aa19.06■□□□□ 0.64
CHFR-213ENST00000536843 PIBF1Q8WXW3 757 aa19.06■□□□□ 0.64
CHFR-213ENST00000536843 PHACTR3Q96KR7 559 aa19.06■□□□□ 0.64
CHFR-213ENST00000536843 CCDC61Q9Y6R9 512 aa19.06■□□□□ 0.64
CHFR-213ENST00000536843 BBXQ8WY36 941 aaPredicted RBP19.05■□□□□ 0.64
CHFR-213ENST00000536843 FAM135BQ49AJ0 1406 aa19.05■□□□□ 0.64
CHFR-213ENST00000536843 IPO8O15397 1037 aaKnown RBP19.05■□□□□ 0.64
CHFR-213ENST00000536843 MBD3O95983 291 aa19.05■□□□□ 0.64
CHFR-213ENST00000536843 PTMAP06454 111 aaKnown RBP19.05■□□□□ 0.64
CHFR-213ENST00000536843 GTF2E1P29083 439 aaPredicted RBP19.05■□□□□ 0.64
CHFR-213ENST00000536843 PDE4CQ08493 712 aa19.05■□□□□ 0.64
CHFR-213ENST00000536843 TMEM2Q9UHN6 1383 aa19.05■□□□□ 0.64
CHFR-213ENST00000536843 RIMS1Q86UR5 1692 aaKnown RBP19.05■□□□□ 0.64
CHFR-213ENST00000536843 IL13P35225 146 aa19.04■□□□□ 0.64
CHFR-213ENST00000536843 ATP2B3Q16720 1220 aa19.04■□□□□ 0.64
CHFR-213ENST00000536843 DNTTIP2Q5QJE6 756 aaKnown RBP19.04■□□□□ 0.64
CHFR-213ENST00000536843 ANKRD45Q5TZF3 282 aa19.04■□□□□ 0.64
CHFR-213ENST00000536843 CFAP44Q96MT7 982 aa19.04■□□□□ 0.64
CHFR-213ENST00000536843 TECPR2O15040 1411 aa19.03■□□□□ 0.64
CHFR-213ENST00000536843 CPS1P31327 1500 aa19.03■□□□□ 0.64
CHFR-213ENST00000536843 NFE2L2Q16236 605 aa19.03■□□□□ 0.64
CHFR-213ENST00000536843 ZDHHC9Q9Y397 364 aa19.03■□□□□ 0.64
CHFR-213ENST00000536843 MAP2P11137 1827 aaKnown RBP19.03■□□□□ 0.64
CHFR-213ENST00000536843 PRR36Q9H6K5 1346 aa19.02■□□□□ 0.64
CHFR-213ENST00000536843 TAF3Q5VWG9 929 aa19.02■□□□□ 0.64
CHFR-213ENST00000536843 PLPPR3Q6T4P5 718 aa19.02■□□□□ 0.64
CHFR-213ENST00000536843 JARID2Q92833 1246 aaPredicted RBP19.02■□□□□ 0.64
CHFR-213ENST00000536843 COG3Q96JB2 828 aa19.02■□□□□ 0.64
CHFR-213ENST00000536843 KIF3AQ9Y496 699 aa19.02■□□□□ 0.64
CHFR-213ENST00000536843 RRS1Q15050 365 aaKnown RBP19.02■□□□□ 0.63
CHFR-213ENST00000536843 ROBO2Q9HCK4 1378 aa19.01■□□□□ 0.63
CHFR-213ENST00000536843 TSC1Q92574 1164 aa19.01■□□□□ 0.63
CHFR-213ENST00000536843 THUMPD2Q9BTF0 503 aaKnown RBP19.01■□□□□ 0.63
CHFR-213ENST00000536843 NOLC1Q14978 699 aaKnown RBP eCLIP19.01■□□□□ 0.63
CHFR-213ENST00000536843 TSPY26PQ9H489 355 aa19.01■□□□□ 0.63
CHFR-213ENST00000536843 AATKQ6ZMQ8 1374 aa19■□□□□ 0.63
CHFR-213ENST00000536843 RNF214Q8ND24 703 aa19■□□□□ 0.63
CHFR-213ENST00000536843 SPTLC3Q9NUV7 552 aa19■□□□□ 0.63
CHFR-213ENST00000536843 NSFL1CQ9UNZ2 370 aaKnown RBP19■□□□□ 0.63
CHFR-213ENST00000536843 KNDC1Q76NI1 1749 aa19■□□□□ 0.63
CHFR-213ENST00000536843 ADAMTS13Q76LX8 1427 aa18.99■□□□□ 0.63
CHFR-213ENST00000536843 LTKP29376 864 aa18.99■□□□□ 0.63
CHFR-213ENST00000536843 FKBP5Q13451 457 aaPredicted RBP18.99■□□□□ 0.63
CHFR-213ENST00000536843 ALDH1L2Q3SY69 923 aa18.99■□□□□ 0.63
CHFR-213ENST00000536843 CDK12Q9NYV4 1490 aaPredicted RBP18.98■□□□□ 0.63
CHFR-213ENST00000536843 THEMISQ8N1K5 641 aaPredicted RBP18.98■□□□□ 0.63
CHFR-213ENST00000536843 CHMP4BQ9H444 224 aaKnown RBP18.98■□□□□ 0.63
CHFR-213ENST00000536843 ZGPATQ8N5A5 531 aaKnown RBP18.98■□□□□ 0.63
CHFR-213ENST00000536843 USP26Q9BXU7 913 aa18.98■□□□□ 0.63
CHFR-213ENST00000536843 BCL2L12Q9HB09 334 aa18.98■□□□□ 0.63
CHFR-213ENST00000536843 SLIT1O75093 1534 aa18.97■□□□□ 0.63
CHFR-213ENST00000536843 ST18O60284 1047 aa18.96■□□□□ 0.63
CHFR-213ENST00000536843 UVSSAQ2YD98 709 aa18.96■□□□□ 0.63
CHFR-213ENST00000536843 ARHGAP23Q9P227 1491 aa18.96■□□□□ 0.63
CHFR-213ENST00000536843 GSPT1P15170 499 aaKnown RBP18.96■□□□□ 0.63
CHFR-213ENST00000536843 PDCL2Q8N4E4 241 aa18.96■□□□□ 0.63
CHFR-213ENST00000536843 NUTM2FA1L443 756 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms