RNA–Protein interactions for RNA: ENST00000536066.1

FOXM1-206, Transcript of forkhead box M1, humanhuman

TSL 1 (best)

Gene FOXM1, Length 2,518 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXM1-206ENST00000536066 RRS1Q15050 365 aaKnown RBP11.31□□□□□ -0.6
FOXM1-206ENST00000536066 KIAA1211Q6ZU35 1233 aa11.31□□□□□ -0.6
FOXM1-206ENST00000536066 PAXIP1Q6ZW49 1069 aaPredicted RBP11.31□□□□□ -0.6
FOXM1-206ENST00000536066 ZNF428Q96B54 188 aa11.31□□□□□ -0.6
FOXM1-206ENST00000536066 TRIM44Q96DX7 344 aaPredicted RBP11.31□□□□□ -0.6
FOXM1-206ENST00000536066 PHACTR3Q96KR7 559 aa11.31□□□□□ -0.6
FOXM1-206ENST00000536066 BCL2L13Q9BXK5 485 aa11.31□□□□□ -0.6
FOXM1-206ENST00000536066 HMOX1P09601 288 aa11.31□□□□□ -0.6
FOXM1-206ENST00000536066 MVPQ14764 893 aaKnown RBP11.31□□□□□ -0.6
FOXM1-206ENST00000536066 TNNQ9UQP3 1299 aa11.31□□□□□ -0.6
FOXM1-206ENST00000536066 KIF16BQ96L93 1317 aa11.3□□□□□ -0.6
FOXM1-206ENST00000536066 IGHDP01880 384 aa11.3□□□□□ -0.6
FOXM1-206ENST00000536066 BRPF1P55201 1214 aaPredicted RBP11.3□□□□□ -0.6
FOXM1-206ENST00000536066 LMOD3Q0VAK6 560 aa11.3□□□□□ -0.6
FOXM1-206ENST00000536066 ALDH1L2Q3SY69 923 aa11.3□□□□□ -0.6
FOXM1-206ENST00000536066 PMFBP1Q8TBY8 1022 aa11.3□□□□□ -0.6
FOXM1-206ENST00000536066 SSH1Q8WYL5 1049 aa11.3□□□□□ -0.6
FOXM1-206ENST00000536066 GRPEL1Q9HAV7 217 aa11.3□□□□□ -0.6
FOXM1-206ENST00000536066 SMC4Q9NTJ3 1288 aa11.3□□□□□ -0.6
FOXM1-206ENST00000536066 MCM4P33991 863 aa11.3□□□□□ -0.6
FOXM1-206ENST00000536066 IFT57Q9NWB7 429 aa11.3□□□□□ -0.6
FOXM1-206ENST00000536066 DZIP1LQ8IYY4 767 aaKnown RBP11.29□□□□□ -0.6
FOXM1-206ENST00000536066 SETD1BQ9UPS6 1966 aaKnown RBP11.29□□□□□ -0.6
FOXM1-206ENST00000536066 ZNF853P0CG23 659 aa11.29□□□□□ -0.6
FOXM1-206ENST00000536066 EIF4A2Q14240 407 aaKnown RBP11.28□□□□□ -0.6
FOXM1-206ENST00000536066 MAP7D2Q96T17 732 aa11.28□□□□□ -0.6
FOXM1-206ENST00000536066 TRAK2O60296 914 aa11.28□□□□□ -0.6
FOXM1-206ENST00000536066 TRIM27P14373 513 aa11.28□□□□□ -0.6
FOXM1-206ENST00000536066 GNAI1P63096 354 aa11.28□□□□□ -0.6
FOXM1-206ENST00000536066 ATF7IPQ6VMQ6 1270 aa11.28□□□□□ -0.6
FOXM1-206ENST00000536066 ARHGEF10O15013 1369 aa11.27□□□□□ -0.6
FOXM1-206ENST00000536066 FTSJ3Q8IY81 847 aaKnown RBP11.27□□□□□ -0.61
FOXM1-206ENST00000536066 PCDHB15Q9Y5E8 787 aa11.27□□□□□ -0.61
FOXM1-206ENST00000536066 SBNO1A3KN83 1393 aa11.27□□□□□ -0.61
FOXM1-206ENST00000536066 SMAP1Q8IYB5 467 aaPredicted RBP11.27□□□□□ -0.61
FOXM1-206ENST00000536066 NUTM2FA1L443 756 aa11.26□□□□□ -0.61
FOXM1-206ENST00000536066 KCNA6P17658 529 aa11.26□□□□□ -0.61
FOXM1-206ENST00000536066 ISY1Q9ULR0 285 aaKnown RBP11.26□□□□□ -0.61
FOXM1-206ENST00000536066 FLT4P35916 1363 aa11.26□□□□□ -0.61
FOXM1-206ENST00000536066 KIF24Q5T7B8 1368 aa11.26□□□□□ -0.61
FOXM1-206ENST00000536066 IPO8O15397 1037 aaKnown RBP11.26□□□□□ -0.61
FOXM1-206ENST00000536066 SEC24BO95487 1268 aa11.26□□□□□ -0.61
FOXM1-206ENST00000536066 DDX19BQ9UMR2 479 aa11.26□□□□□ -0.61
FOXM1-206ENST00000536066 CFAP44Q96MT7 982 aa11.25□□□□□ -0.61
FOXM1-206ENST00000536066 RWDD1Q9H446 243 aaPredicted RBP11.25□□□□□ -0.61
FOXM1-206ENST00000536066 NOB1Q9ULX3 412 aaKnown RBP11.25□□□□□ -0.61
FOXM1-206ENST00000536066 KDRP35968 1356 aa11.24□□□□□ -0.61
FOXM1-206ENST00000536066 MAP3K19Q56UN5 1328 aa11.24□□□□□ -0.61
FOXM1-206ENST00000536066 NWD1Q149M9 1564 aa11.24□□□□□ -0.61
FOXM1-206ENST00000536066 VAMP4O75379 141 aa11.24□□□□□ -0.61
FOXM1-206ENST00000536066 OFD1O75665 1012 aa11.24□□□□□ -0.61
FOXM1-206ENST00000536066 TERF1P54274 439 aa11.24□□□□□ -0.61
FOXM1-206ENST00000536066 ANKLE2Q86XL3 938 aa11.24□□□□□ -0.61
FOXM1-206ENST00000536066 NGDNQ8NEJ9 315 aaKnown RBP11.24□□□□□ -0.61
FOXM1-206ENST00000536066 THUMPD2Q9BTF0 503 aaKnown RBP11.24□□□□□ -0.61
FOXM1-206ENST00000536066 MBIPQ9NS73 344 aa11.24□□□□□ -0.61
FOXM1-206ENST00000536066 FAM13BQ9NYF5 915 aa11.24□□□□□ -0.61
FOXM1-206ENST00000536066 LRRC37A3O60309 1634 aa11.23□□□□□ -0.61
FOXM1-206ENST00000536066 ADGRL3Q9HAR2 1447 aa11.23□□□□□ -0.61
FOXM1-206ENST00000536066 SULT6B1Q6IMI4 303 aa11.23□□□□□ -0.61
FOXM1-206ENST00000536066 AEBP1Q8IUX7 1158 aa11.23□□□□□ -0.61
FOXM1-206ENST00000536066 ARHGAP45Q92619 1136 aa11.23□□□□□ -0.61
FOXM1-206ENST00000536066 TBC1D2Q9BYX2 928 aa11.23□□□□□ -0.61
FOXM1-206ENST00000536066 HDAC1Q13547 482 aaPredicted RBP11.23□□□□□ -0.61
FOXM1-206ENST00000536066 HSP90AB2PQ58FF8 381 aa11.23□□□□□ -0.61
FOXM1-206ENST00000536066 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.22□□□□□ -0.61
FOXM1-206ENST00000536066 MRPL50Q8N5N7 158 aaKnown RBP11.22□□□□□ -0.61
FOXM1-206ENST00000536066 ITPRIPQ8IWB1 547 aa11.22□□□□□ -0.61
FOXM1-206ENST00000536066 TMEM57Q8N5G2 664 aa11.22□□□□□ -0.61
FOXM1-206ENST00000536066 ZHX1Q9UKY1 873 aaPredicted RBP11.22□□□□□ -0.61
FOXM1-206ENST00000536066 PHRF1Q9P1Y6 1649 aaKnown RBP11.21□□□□□ -0.61
FOXM1-206ENST00000536066 SPRYD3Q8NCJ5 442 aa11.21□□□□□ -0.61
FOXM1-206ENST00000536066 ZBTB40Q9NUA8 1239 aa11.21□□□□□ -0.61
FOXM1-206ENST00000536066 IGSF1Q8N6C5 1336 aa11.21□□□□□ -0.61
FOXM1-206ENST00000536066 CDK11BP21127 795 aaKnown RBP11.2□□□□□ -0.62
FOXM1-206ENST00000536066 RNF39Q9H2S5 420 aa11.2□□□□□ -0.62
FOXM1-206ENST00000536066 CHMP5Q9NZZ3 219 aa11.2□□□□□ -0.62
FOXM1-206ENST00000536066 RTL1A6NKG5 1358 aa11.2□□□□□ -0.62
FOXM1-206ENST00000536066 NPHP4O75161 1426 aaPredicted RBP11.2□□□□□ -0.62
FOXM1-206ENST00000536066 LTN1O94822 1766 aa11.2□□□□□ -0.62
FOXM1-206ENST00000536066 CRB1P82279 1406 aa11.2□□□□□ -0.62
FOXM1-206ENST00000536066 KIAA0232Q92628 1395 aa11.2□□□□□ -0.62
FOXM1-206ENST00000536066 ABCC4O15439 1325 aa11.2□□□□□ -0.62
FOXM1-206ENST00000536066 TSPYL6Q8N831 410 aa11.2□□□□□ -0.62
FOXM1-206ENST00000536066 BBXQ8WY36 941 aaPredicted RBP11.2□□□□□ -0.62
FOXM1-206ENST00000536066 UPF2Q9HAU5 1272 aaKnown RBP11.2□□□□□ -0.62
FOXM1-206ENST00000536066 PDZRN3Q9UPQ7 1066 aa11.2□□□□□ -0.62
FOXM1-206ENST00000536066 NFAT5O94916 1531 aa11.2□□□□□ -0.62
FOXM1-206ENST00000536066 FAM83GA6ND36 823 aa11.19□□□□□ -0.62
FOXM1-206ENST00000536066 DDX11L8A8MPP1 907 aa11.19□□□□□ -0.62
FOXM1-206ENST00000536066 TWISTNBQ3B726 338 aaPredicted RBP11.19□□□□□ -0.62
FOXM1-206ENST00000536066 TMEM132AQ24JP5 1023 aa11.19□□□□□ -0.62
FOXM1-206ENST00000536066 ZSCAN30Q86W11 494 aa11.19□□□□□ -0.62
FOXM1-206ENST00000536066 CHL1O00533 1208 aa11.18□□□□□ -0.62
FOXM1-206ENST00000536066 CHMP4BQ9H444 224 aaKnown RBP11.18□□□□□ -0.62
FOXM1-206ENST00000536066 MTERF4Q7Z6M4 381 aaKnown RBP11.18□□□□□ -0.62
FOXM1-206ENST00000536066 SMC5Q8IY18 1101 aa11.18□□□□□ -0.62
FOXM1-206ENST00000536066 C8orf58Q8NAV2 365 aa11.18□□□□□ -0.62
FOXM1-206ENST00000536066 TBC1D32Q96NH3 1257 aa11.18□□□□□ -0.62
FOXM1-206ENST00000536066 KDM4FA0A1W2PPD8 638 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms