RNA–Protein interactions for RNA: ENST00000536013.5

PTPN6-207, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 602 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-207ENST00000536013 BCL11BQ9C0K0 894 aaPredicted RBP17.56■□□□□ 0.4
PTPN6-207ENST00000536013 IL13P35225 146 aa17.55■□□□□ 0.4
PTPN6-207ENST00000536013 NHSQ6T4R5 1651 aa17.55■□□□□ 0.4
PTPN6-207ENST00000536013 PARD3Q8TEW0 1356 aa17.54■□□□□ 0.4
PTPN6-207ENST00000536013 COL3A1P02461 1466 aaPredicted RBP17.53■□□□□ 0.4
PTPN6-207ENST00000536013 APBA3O96018 575 aa17.53■□□□□ 0.4
PTPN6-207ENST00000536013 EN1Q05925 392 aaPredicted RBP17.53■□□□□ 0.4
PTPN6-207ENST00000536013 DDX54Q8TDD1 881 aaKnown RBP17.53■□□□□ 0.4
PTPN6-207ENST00000536013 CAMKK2Q96RR4 588 aa17.53■□□□□ 0.4
PTPN6-207ENST00000536013 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.53■□□□□ 0.4
PTPN6-207ENST00000536013 RGPD3A6NKT7 1758 aaPredicted RBP17.53■□□□□ 0.4
PTPN6-207ENST00000536013 RGPD4Q7Z3J3 1758 aa17.53■□□□□ 0.4
PTPN6-207ENST00000536013 KDRP35968 1356 aa17.53■□□□□ 0.4
PTPN6-207ENST00000536013 KAT6BQ8WYB5 2073 aa17.52■□□□□ 0.4
PTPN6-207ENST00000536013 PCDH11XQ9BZA7 1347 aa17.52■□□□□ 0.4
PTPN6-207ENST00000536013 PCDH11YQ9BZA8 1340 aa17.52■□□□□ 0.4
PTPN6-207ENST00000536013 PTF1AQ7RTS3 328 aa17.52■□□□□ 0.4
PTPN6-207ENST00000536013 CNGB1Q14028 1251 aaPredicted RBP17.51■□□□□ 0.39
PTPN6-207ENST00000536013 PLSCR1O15162 318 aa17.5■□□□□ 0.39
PTPN6-207ENST00000536013 KCNQ2O43526 872 aa17.5■□□□□ 0.39
PTPN6-207ENST00000536013 DDX10Q13206 875 aaKnown RBP17.5■□□□□ 0.39
PTPN6-207ENST00000536013 RREB1Q92766 1687 aa17.49■□□□□ 0.39
PTPN6-207ENST00000536013 CYP27B1O15528 508 aa17.49■□□□□ 0.39
PTPN6-207ENST00000536013 DIAPH1O60610 1272 aaKnown RBP17.49■□□□□ 0.39
PTPN6-207ENST00000536013 PPP2R1AP30153 589 aa17.49■□□□□ 0.39
PTPN6-207ENST00000536013 SPG7Q9UQ90 795 aa17.49■□□□□ 0.39
PTPN6-207ENST00000536013 DOT1LQ8TEK3 1739 aa17.48■□□□□ 0.39
PTPN6-207ENST00000536013 EZH2Q15910 746 aaKnown RBP17.48■□□□□ 0.39
PTPN6-207ENST00000536013 AEBP1Q8IUX7 1158 aa17.48■□□□□ 0.39
PTPN6-207ENST00000536013 ACSBG1Q96GR2 724 aa17.48■□□□□ 0.39
PTPN6-207ENST00000536013 SRCAPQ6ZRS2 3230 aa17.48■□□□□ 0.39
PTPN6-207ENST00000536013 NKX1-1Q15270 411 aaPredicted RBP17.47■□□□□ 0.39
PTPN6-207ENST00000536013 SULT6B1Q6IMI4 303 aa17.47■□□□□ 0.39
PTPN6-207ENST00000536013 BTAF1O14981 1849 aa17.47■□□□□ 0.39
PTPN6-207ENST00000536013 NUP188Q5SRE5 1749 aa17.45■□□□□ 0.38
PTPN6-207ENST00000536013 PRIM1P49642 420 aaKnown RBP17.44■□□□□ 0.38
PTPN6-207ENST00000536013 AMOTQ4VCS5 1084 aa17.44■□□□□ 0.38
PTPN6-207ENST00000536013 CFAP53Q96M91 514 aa17.44■□□□□ 0.38
PTPN6-207ENST00000536013 TOGARAM1Q9Y4F4 1720 aa17.44■□□□□ 0.38
PTPN6-207ENST00000536013 PHKG2P15735 406 aa17.43■□□□□ 0.38
PTPN6-207ENST00000536013 RALBP1Q15311 655 aa17.43■□□□□ 0.38
PTPN6-207ENST00000536013 PLEKHO1Q53GL0 409 aaPredicted RBP17.43■□□□□ 0.38
PTPN6-207ENST00000536013 IFNL2Q8IZJ0 200 aa17.43■□□□□ 0.38
PTPN6-207ENST00000536013 PROM2Q8N271 834 aa17.42■□□□□ 0.38
PTPN6-207ENST00000536013 HMOX1P09601 288 aa17.4■□□□□ 0.38
PTPN6-207ENST00000536013 TXNRD1Q16881 649 aa17.4■□□□□ 0.38
PTPN6-207ENST00000536013 SYTL4Q96C24 671 aaPredicted RBP17.4■□□□□ 0.38
PTPN6-207ENST00000536013 ITGB4P16144 1822 aa17.4■□□□□ 0.38
PTPN6-207ENST00000536013 ZNF316A6NFI3 1004 aaPredicted RBP17.39■□□□□ 0.37
PTPN6-207ENST00000536013 ZNF530Q6P9A1 599 aaPredicted RBP17.39■□□□□ 0.37
PTPN6-207ENST00000536013 U2SURPO15042 1029 aaKnown RBP17.38■□□□□ 0.37
PTPN6-207ENST00000536013 HSP90AB1P08238 724 aaKnown RBP17.38■□□□□ 0.37
PTPN6-207ENST00000536013 NUDCQ9Y266 331 aa17.38■□□□□ 0.37
PTPN6-207ENST00000536013 DCAF5Q96JK2 942 aa17.37■□□□□ 0.37
PTPN6-207ENST00000536013 LY75O60449 1722 aa17.37■□□□□ 0.37
PTPN6-207ENST00000536013 NBPF14Q5TI25 921 aa17.36■□□□□ 0.37
PTPN6-207ENST00000536013 KDM6AO15550 1401 aaPredicted RBP17.36■□□□□ 0.37
PTPN6-207ENST00000536013 PAPPAQ13219 1627 aa17.36■□□□□ 0.37
PTPN6-207ENST00000536013 ERVV-2B6SEH9 535 aa17.35■□□□□ 0.37
PTPN6-207ENST00000536013 C1orf141Q5JVX7 400 aa17.35■□□□□ 0.37
PTPN6-207ENST00000536013 SLC27A3Q5K4L6 730 aa17.35■□□□□ 0.37
PTPN6-207ENST00000536013 MPRIPQ6WCQ1 1025 aa17.35■□□□□ 0.37
PTPN6-207ENST00000536013 PIGBQ92521 554 aa17.35■□□□□ 0.37
PTPN6-207ENST00000536013 RSPH6AQ9H0K4 717 aa17.35■□□□□ 0.37
PTPN6-207ENST00000536013 MYBBP1AQ9BQG0 1328 aaKnown RBP17.35■□□□□ 0.37
PTPN6-207ENST00000536013 AKAP4Q5JQC9 854 aa17.34■□□□□ 0.37
PTPN6-207ENST00000536013 PRKRIP1Q9H875 184 aaPredicted RBP17.34■□□□□ 0.37
PTPN6-207ENST00000536013 R3HDM1Q15032 1099 aaKnown RBP17.33■□□□□ 0.36
PTPN6-207ENST00000536013 MTHFSDQ2M296 383 aaKnown RBP17.33■□□□□ 0.36
PTPN6-207ENST00000536013 ANO8Q9HCE9 1232 aaPredicted RBP17.33■□□□□ 0.36
PTPN6-207ENST00000536013 LRRC4BQ9NT99 713 aa17.33■□□□□ 0.36
PTPN6-207ENST00000536013 TMOD3Q9NYL9 352 aa17.33■□□□□ 0.36
PTPN6-207ENST00000536013 SCN11AQ9UI33 1791 aa17.33■□□□□ 0.36
PTPN6-207ENST00000536013 ADAMTS7Q9UKP4 1686 aa17.32■□□□□ 0.36
PTPN6-207ENST00000536013 PSDA5PKW4 1024 aaPredicted RBP17.32■□□□□ 0.36
PTPN6-207ENST00000536013 FCHSD2O94868 740 aa17.32■□□□□ 0.36
PTPN6-207ENST00000536013 U2AF1L5P0DN76 240 aaPredicted RBP17.32■□□□□ 0.36
PTPN6-207ENST00000536013 U2AF1Q01081 240 aaKnown RBP eCLIP17.32■□□□□ 0.36
PTPN6-207ENST00000536013 SMARCC1Q92922 1105 aaPredicted RBP17.32■□□□□ 0.36
PTPN6-207ENST00000536013 PALLDQ8WX93 1383 aa17.31■□□□□ 0.36
PTPN6-207ENST00000536013 PRKAR2BP31323 418 aa17.31■□□□□ 0.36
PTPN6-207ENST00000536013 GAS2L2Q8NHY3 880 aa17.3■□□□□ 0.36
PTPN6-207ENST00000536013 MRC1P22897 1456 aa17.3■□□□□ 0.36
PTPN6-207ENST00000536013 PHACTR3Q96KR7 559 aa17.29■□□□□ 0.36
PTPN6-207ENST00000536013 VIRMAQ69YN4 1812 aaKnown RBP17.28■□□□□ 0.36
PTPN6-207ENST00000536013 CABP4P57796 275 aa17.28■□□□□ 0.36
PTPN6-207ENST00000536013 SLC15A2Q16348 729 aa17.28■□□□□ 0.36
PTPN6-207ENST00000536013 STK32BQ9NY57 414 aa17.28■□□□□ 0.36
PTPN6-207ENST00000536013 CCNL1Q9UK58 526 aaPredicted RBP17.28■□□□□ 0.36
PTPN6-207ENST00000536013 RNMTO43148 476 aaKnown RBP17.27■□□□□ 0.36
PTPN6-207ENST00000536013 HMGB2P26583 209 aaKnown RBP17.27■□□□□ 0.36
PTPN6-207ENST00000536013 ATG3Q9NT62 314 aa17.27■□□□□ 0.36
PTPN6-207ENST00000536013 ASAP1Q9ULH1 1129 aa17.27■□□□□ 0.36
PTPN6-207ENST00000536013 MAP3K5Q99683 1374 aa17.27■□□□□ 0.35
PTPN6-207ENST00000536013 AKT1S1Q96B36 256 aa17.26■□□□□ 0.35
PTPN6-207ENST00000536013 SLC52A2Q9HAB3 445 aa17.26■□□□□ 0.35
PTPN6-207ENST00000536013 LGR6Q9HBX8 967 aa17.26■□□□□ 0.35
PTPN6-207ENST00000536013 TAF1LQ8IZX4 1826 aa17.26■□□□□ 0.35
PTPN6-207ENST00000536013 CASZ1Q86V15 1759 aa17.25■□□□□ 0.35
PTPN6-207ENST00000536013 GNAT3A8MTJ3 354 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms