RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 SLC4A8Q2Y0W8 1093 aa14.91□□□□□ -0.02
SPG11-203ENST00000535302 PLCD3Q8N3E9 789 aa14.91□□□□□ -0.02
SPG11-203ENST00000535302 ZBTB9Q96C00 473 aa14.91□□□□□ -0.02
SPG11-203ENST00000535302 EXOC6BQ9Y2D4 811 aa14.91□□□□□ -0.02
SPG11-203ENST00000535302 GOLGA6L10A6NI86 522 aa14.91□□□□□ -0.02
SPG11-203ENST00000535302 CCDC113Q9H0I3 377 aa14.91□□□□□ -0.02
SPG11-203ENST00000535302 ZNF219Q9P2Y4 722 aaPredicted RBP14.91□□□□□ -0.02
SPG11-203ENST00000535302 ARAP1Q96P48 1450 aa14.9□□□□□ -0.02
SPG11-203ENST00000535302 TNNT1P13805 278 aa14.9□□□□□ -0.02
SPG11-203ENST00000535302 ECM2O94769 699 aaPredicted RBP14.9□□□□□ -0.02
SPG11-203ENST00000535302 RBM25P49756 843 aaKnown RBP14.9□□□□□ -0.02
SPG11-203ENST00000535302 ATF7IPQ6VMQ6 1270 aa14.9□□□□□ -0.02
SPG11-203ENST00000535302 TNMDQ9H2S6 317 aa14.9□□□□□ -0.02
SPG11-203ENST00000535302 PDRG1Q9NUG6 133 aa14.9□□□□□ -0.02
SPG11-203ENST00000535302 CWC15Q9P013 229 aaKnown RBP14.9□□□□□ -0.02
SPG11-203ENST00000535302 MVPQ14764 893 aaKnown RBP14.9□□□□□ -0.02
SPG11-203ENST00000535302 LARP1BQ659C4 914 aaKnown RBP14.9□□□□□ -0.02
SPG11-203ENST00000535302 ZRSR2Q15696 482 aaKnown RBP14.89□□□□□ -0.03
SPG11-203ENST00000535302 ABCF2Q9UG63 623 aa14.89□□□□□ -0.03
SPG11-203ENST00000535302 NACAP1Q9BZK3 213 aa14.89□□□□□ -0.03
SPG11-203ENST00000535302 LIG1P18858 919 aa14.89□□□□□ -0.03
SPG11-203ENST00000535302 PPFIBP1Q86W92 1011 aa14.89□□□□□ -0.03
SPG11-203ENST00000535302 LRP2BPQ9P2M1 347 aa14.89□□□□□ -0.03
SPG11-203ENST00000535302 ERLIN2O94905 339 aa14.89□□□□□ -0.03
SPG11-203ENST00000535302 ZNF76P36508 570 aa14.89□□□□□ -0.03
SPG11-203ENST00000535302 ERCC4Q92889 916 aaPredicted RBP14.89□□□□□ -0.03
SPG11-203ENST00000535302 ZNHIT6Q9NWK9 470 aaKnown RBP14.89□□□□□ -0.03
SPG11-203ENST00000535302 PAXIP1Q6ZW49 1069 aaPredicted RBP14.88□□□□□ -0.03
SPG11-203ENST00000535302 TMEM57Q8N5G2 664 aa14.88□□□□□ -0.03
SPG11-203ENST00000535302 SERPINA10Q9UK55 444 aa14.88□□□□□ -0.03
SPG11-203ENST00000535302 CAMK4Q16566 473 aa14.88□□□□□ -0.03
SPG11-203ENST00000535302 PUS7Q96PZ0 661 aaKnown RBP14.88□□□□□ -0.03
SPG11-203ENST00000535302 GOLGA6L10A0A0M3HER8 536 aa14.88□□□□□ -0.03
SPG11-203ENST00000535302 LARP6Q9BRS8 491 aaKnown RBP14.88□□□□□ -0.03
SPG11-203ENST00000535302 TRIM22Q8IYM9 498 aa14.88□□□□□ -0.03
SPG11-203ENST00000535302 SOGA3Q5TF21 947 aa14.87□□□□□ -0.03
SPG11-203ENST00000535302 K7ELQ4 463 aaPredicted RBP14.87□□□□□ -0.03
SPG11-203ENST00000535302 ADAMTS2O95450 1211 aa14.87□□□□□ -0.03
SPG11-203ENST00000535302 PRDM10Q9NQV6 1147 aa14.87□□□□□ -0.03
SPG11-203ENST00000535302 NSD3Q9BZ95 1437 aa14.86□□□□□ -0.03
SPG11-203ENST00000535302 WDR78Q5VTH9 848 aa14.86□□□□□ -0.03
SPG11-203ENST00000535302 ANKLE2Q86XL3 938 aa14.86□□□□□ -0.03
SPG11-203ENST00000535302 ZNF692Q9BU19 519 aaPredicted RBP14.86□□□□□ -0.03
SPG11-203ENST00000535302 KIAA0754O94854 1291 aa14.86□□□□□ -0.03
SPG11-203ENST00000535302 CASTP20810 708 aaKnown RBP14.86□□□□□ -0.03
SPG11-203ENST00000535302 MYD88Q99836 296 aa14.86□□□□□ -0.03
SPG11-203ENST00000535302 LETM1O95202 739 aaPredicted RBP14.86□□□□□ -0.03
SPG11-203ENST00000535302 GRIN2BQ13224 1484 aa14.86□□□□□ -0.03
SPG11-203ENST00000535302 NUDT16Q96DE0 195 aaKnown RBP14.86□□□□□ -0.03
SPG11-203ENST00000535302 ZFP91Q96JP5 570 aaPredicted RBP14.86□□□□□ -0.03
SPG11-203ENST00000535302 SPDYE4A6NLX3 237 aa14.86□□□□□ -0.03
SPG11-203ENST00000535302 BCCIPQ9P287 314 aaKnown RBP eCLIP14.86□□□□□ -0.03
SPG11-203ENST00000535302 KIAA1107Q9UPP5 1409 aa14.85□□□□□ -0.03
SPG11-203ENST00000535302 PDE3AQ14432 1141 aa14.85□□□□□ -0.03
SPG11-203ENST00000535302 UBAC1Q9BSL1 405 aa14.85□□□□□ -0.03
SPG11-203ENST00000535302 PDCP20941 246 aa14.85□□□□□ -0.03
SPG11-203ENST00000535302 GBP2P32456 591 aaPredicted RBP14.85□□□□□ -0.03
SPG11-203ENST00000535302 CCDC102AQ96A19 550 aa14.85□□□□□ -0.03
SPG11-203ENST00000535302 STAC3Q96MF2 364 aa14.85□□□□□ -0.03
SPG11-203ENST00000535302 GNAT3A8MTJ3 354 aa14.85□□□□□ -0.03
SPG11-203ENST00000535302 F6X3S4 739 aa14.85□□□□□ -0.03
SPG11-203ENST00000535302 BLOC1S2Q6QNY1 142 aa14.85□□□□□ -0.03
SPG11-203ENST00000535302 SRRTQ9BXP5 876 aaKnown RBP14.85□□□□□ -0.03
SPG11-203ENST00000535302 CCDC82Q8N4S0 544 aa14.85□□□□□ -0.03
SPG11-203ENST00000535302 SPATA32Q96LK8 384 aa14.85□□□□□ -0.03
SPG11-203ENST00000535302 GOPCQ9HD26 462 aa14.85□□□□□ -0.03
SPG11-203ENST00000535302 FERMT3Q86UX7 667 aa14.84□□□□□ -0.03
SPG11-203ENST00000535302 TRERF1Q96PN7 1200 aa14.84□□□□□ -0.03
SPG11-203ENST00000535302 AAMPQ13685 434 aa14.84□□□□□ -0.03
SPG11-203ENST00000535302 HMGN5P82970 282 aaKnown RBP14.84□□□□□ -0.03
SPG11-203ENST00000535302 UBA5Q9GZZ9 404 aa14.84□□□□□ -0.03
SPG11-203ENST00000535302 CEP126Q9P2H0 1117 aa14.84□□□□□ -0.03
SPG11-203ENST00000535302 METTL24Q5JXM2 366 aa14.84□□□□□ -0.03
SPG11-203ENST00000535302 PNISRQ8TF01 805 aaKnown RBP14.84□□□□□ -0.03
SPG11-203ENST00000535302 MINDY4BA8MYZ0 360 aa14.84□□□□□ -0.03
SPG11-203ENST00000535302 TICAM2Q86XR7 235 aa14.84□□□□□ -0.03
SPG11-203ENST00000535302 SCLT1Q96NL6 688 aa14.84□□□□□ -0.03
SPG11-203ENST00000535302 MPRIPQ6WCQ1 1025 aa14.84□□□□□ -0.03
SPG11-203ENST00000535302 KIAA1328Q86T90 577 aa14.84□□□□□ -0.03
SPG11-203ENST00000535302 MBD3O95983 291 aa14.83□□□□□ -0.03
SPG11-203ENST00000535302 FILIP1Q7Z7B0 1213 aa14.83□□□□□ -0.03
SPG11-203ENST00000535302 BOLA2Q9H3K6 86 aa14.83□□□□□ -0.03
SPG11-203ENST00000535302 PPFIA3O75145 1194 aa14.83□□□□□ -0.04
SPG11-203ENST00000535302 GUCY1B3Q02153 619 aa14.83□□□□□ -0.04
SPG11-203ENST00000535302 DUSP27Q5VZP5 1158 aa14.83□□□□□ -0.04
SPG11-203ENST00000535302 NME9Q86XW9 330 aa14.83□□□□□ -0.04
SPG11-203ENST00000535302 AIDAQ96BJ3 306 aa14.83□□□□□ -0.04
SPG11-203ENST00000535302 IGHMBP2P38935 993 aaKnown RBP14.83□□□□□ -0.04
SPG11-203ENST00000535302 WDR63Q8IWG1 891 aa14.82□□□□□ -0.04
SPG11-203ENST00000535302 TMPOP42166 694 aaKnown RBP14.82□□□□□ -0.04
SPG11-203ENST00000535302 C20orf194Q5TEA3 1177 aa14.82□□□□□ -0.04
SPG11-203ENST00000535302 CCDC83Q8IWF9 413 aa14.82□□□□□ -0.04
SPG11-203ENST00000535302 CCDC192P0DO97 292 aa14.82□□□□□ -0.04
SPG11-203ENST00000535302 MCM2P49736 904 aa14.82□□□□□ -0.04
SPG11-203ENST00000535302 UQCRHLA0A096LP55 91 aa14.82□□□□□ -0.04
SPG11-203ENST00000535302 UQCRHP07919 91 aa14.82□□□□□ -0.04
SPG11-203ENST00000535302 PRPF40BQ6NWY9 871 aaKnown RBP14.82□□□□□ -0.04
SPG11-203ENST00000535302 JARID2Q92833 1246 aaPredicted RBP14.82□□□□□ -0.04
SPG11-203ENST00000535302 KLHL10Q6JEL2 608 aa14.82□□□□□ -0.04
SPG11-203ENST00000535302 CCDC112Q8NEF3 446 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms