RNA–Protein interactions for RNA: ENST00000535283.5

DDB1-206, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-206ENST00000535283 SSH2Q76I76 1423 aa12.96□□□□□ -0.34
DDB1-206ENST00000535283 ZC3H6P61129 1189 aaKnown RBP12.95□□□□□ -0.34
DDB1-206ENST00000535283 BARGINQ6ZT62 677 aa12.95□□□□□ -0.34
DDB1-206ENST00000535283 PPM1GO15355 546 aaPredicted RBP12.94□□□□□ -0.34
DDB1-206ENST00000535283 LARP1Q6PKG0 1096 aaKnown RBP12.94□□□□□ -0.34
DDB1-206ENST00000535283 PROM2Q8N271 834 aa12.94□□□□□ -0.34
DDB1-206ENST00000535283 KIF24Q5T7B8 1368 aa12.94□□□□□ -0.34
DDB1-206ENST00000535283 MON2Q7Z3U7 1717 aa12.93□□□□□ -0.34
DDB1-206ENST00000535283 U2AF1L5P0DN76 240 aaPredicted RBP12.93□□□□□ -0.34
DDB1-206ENST00000535283 U2AF1Q01081 240 aaKnown RBP eCLIP12.93□□□□□ -0.343e-7■□□□□ 8
DDB1-206ENST00000535283 SGIP1Q9BQI5 828 aa12.93□□□□□ -0.34
DDB1-206ENST00000535283 BCL11BQ9C0K0 894 aaPredicted RBP12.93□□□□□ -0.34
DDB1-206ENST00000535283 RNF39Q9H2S5 420 aa12.93□□□□□ -0.34
DDB1-206ENST00000535283 POLKQ9UBT6 870 aa12.93□□□□□ -0.34
DDB1-206ENST00000535283 OVOS2A0A0J9YW53 1432 aa12.92□□□□□ -0.34
DDB1-206ENST00000535283 U2SURPO15042 1029 aaKnown RBP12.92□□□□□ -0.34
DDB1-206ENST00000535283 PLSCR1O15162 318 aa12.92□□□□□ -0.34
DDB1-206ENST00000535283 OVOS2Q6IE36 1432 aa12.92□□□□□ -0.34
DDB1-206ENST00000535283 RUNDC1Q96C34 613 aa12.92□□□□□ -0.34
DDB1-206ENST00000535283 LMO7Q8WWI1 1683 aa12.92□□□□□ -0.34
DDB1-206ENST00000535283 AKAP12Q02952 1782 aa12.92□□□□□ -0.34
DDB1-206ENST00000535283 LRRC37A3O60309 1634 aa12.91□□□□□ -0.34
DDB1-206ENST00000535283 MAPK8IP3Q9UPT6 1336 aa12.91□□□□□ -0.34
DDB1-206ENST00000535283 AMPHP49418 695 aa12.91□□□□□ -0.34
DDB1-206ENST00000535283 NUTM2GQ5VZR2 741 aa12.91□□□□□ -0.34
DDB1-206ENST00000535283 TCP11L2Q8N4U5 519 aa12.91□□□□□ -0.34
DDB1-206ENST00000535283 ANKRD26Q9UPS8 1709 aa12.91□□□□□ -0.34
DDB1-206ENST00000535283 KIF20BQ96Q89 1820 aa12.9□□□□□ -0.34
DDB1-206ENST00000535283 OVOS2A0A0G2JMS6 1433 aa12.9□□□□□ -0.34
DDB1-206ENST00000535283 SMG6Q86US8 1419 aaKnown RBP12.9□□□□□ -0.34
DDB1-206ENST00000535283 EVA1CP58658 441 aa12.9□□□□□ -0.34
DDB1-206ENST00000535283 FCHSD2O94868 740 aa12.89□□□□□ -0.35
DDB1-206ENST00000535283 GPR162Q16538 588 aa12.89□□□□□ -0.35
DDB1-206ENST00000535283 NEFLP07196 543 aa12.88□□□□□ -0.35
DDB1-206ENST00000535283 MTFR1LQ9H019 292 aa12.88□□□□□ -0.35
DDB1-206ENST00000535283 FLT4P35916 1363 aa12.88□□□□□ -0.35
DDB1-206ENST00000535283 RTL1A6NKG5 1358 aa12.87□□□□□ -0.35
DDB1-206ENST00000535283 RRS1Q15050 365 aaKnown RBP12.87□□□□□ -0.35
DDB1-206ENST00000535283 SLC15A2Q16348 729 aa12.87□□□□□ -0.35
DDB1-206ENST00000535283 ARXQ96QS3 562 aa12.87□□□□□ -0.35
DDB1-206ENST00000535283 EMILIN1Q9Y6C2 1016 aa12.87□□□□□ -0.35
DDB1-206ENST00000535283 STK32BQ9NY57 414 aa12.86□□□□□ -0.35
DDB1-206ENST00000535283 WNK3Q9BYP7 1800 aa12.85□□□□□ -0.35
DDB1-206ENST00000535283 MAP3K5Q99683 1374 aa12.85□□□□□ -0.35
DDB1-206ENST00000535283 SOX12O15370 315 aa12.85□□□□□ -0.35
DDB1-206ENST00000535283 TXNRD1Q16881 649 aa12.85□□□□□ -0.35
DDB1-206ENST00000535283 PELP1Q8IZL8 1130 aaKnown RBP12.85□□□□□ -0.35
DDB1-206ENST00000535283 MAP3K19Q56UN5 1328 aa12.85□□□□□ -0.35
DDB1-206ENST00000535283 COL5A2P05997 1499 aaPredicted RBP12.85□□□□□ -0.35
DDB1-206ENST00000535283 APAF1O14727 1248 aa12.84□□□□□ -0.35
DDB1-206ENST00000535283 IL13P35225 146 aa12.84□□□□□ -0.35
DDB1-206ENST00000535283 CALD1Q05682 793 aaKnown RBP12.84□□□□□ -0.35
DDB1-206ENST00000535283 GOLGA2Q08379 1002 aa12.84□□□□□ -0.35
DDB1-206ENST00000535283 LMOD3Q0VAK6 560 aa12.84□□□□□ -0.35
DDB1-206ENST00000535283 CCDC27Q2M243 656 aa12.84□□□□□ -0.35
DDB1-206ENST00000535283 CCDC146Q8IYE0 955 aa12.84□□□□□ -0.35
DDB1-206ENST00000535283 THRAP3Q9Y2W1 955 aaKnown RBP12.84□□□□□ -0.35
DDB1-206ENST00000535283 GCP02774 474 aa12.83□□□□□ -0.36
DDB1-206ENST00000535283 PAPPAQ13219 1627 aa12.82□□□□□ -0.36
DDB1-206ENST00000535283 E9PSI1 815 aa12.82□□□□□ -0.36
DDB1-206ENST00000535283 KLHL34Q8N239 644 aa12.82□□□□□ -0.36
DDB1-206ENST00000535283 SALL2Q9Y467 1007 aaPredicted RBP12.82□□□□□ -0.36
DDB1-206ENST00000535283 COL3A1P02461 1466 aaPredicted RBP12.82□□□□□ -0.36
DDB1-206ENST00000535283 USP19O94966 1318 aa12.82□□□□□ -0.36
DDB1-206ENST00000535283 HSPA6P17066 643 aa12.81□□□□□ -0.36
DDB1-206ENST00000535283 HOXC9P31274 260 aa12.81□□□□□ -0.36
DDB1-206ENST00000535283 EIF4A2Q14240 407 aaKnown RBP12.81□□□□□ -0.36
DDB1-206ENST00000535283 DDB1Q16531 1140 aa12.81□□□□□ -0.36
DDB1-206ENST00000535283 WDR63Q8IWG1 891 aa12.81□□□□□ -0.36
DDB1-206ENST00000535283 MARCH10Q8NA82 808 aaPredicted RBP12.81□□□□□ -0.36
DDB1-206ENST00000535283 IP6K1Q92551 441 aa12.81□□□□□ -0.36
DDB1-206ENST00000535283 CRB1P82279 1406 aa12.8□□□□□ -0.36
DDB1-206ENST00000535283 ATP10DQ9P241 1426 aa12.8□□□□□ -0.36
DDB1-206ENST00000535283 NLGN2Q8NFZ4 835 aa12.8□□□□□ -0.36
DDB1-206ENST00000535283 CPDO75976 1380 aa12.8□□□□□ -0.36
DDB1-206ENST00000535283 FBLN1P23142 703 aa12.79□□□□□ -0.36
DDB1-206ENST00000535283 PRKAR2BP31323 418 aa12.79□□□□□ -0.36
DDB1-206ENST00000535283 HSP90AB2PQ58FF8 381 aa12.79□□□□□ -0.36
DDB1-206ENST00000535283 RSPH6AQ9H0K4 717 aa12.79□□□□□ -0.36
DDB1-206ENST00000535283 MYH16Q9H6N6 1097 aa12.79□□□□□ -0.36
DDB1-206ENST00000535283 USP54Q70EL1 1684 aa12.79□□□□□ -0.36
DDB1-206ENST00000535283 PIK3C2AO00443 1686 aa12.78□□□□□ -0.36
DDB1-206ENST00000535283 YBX3P16989 372 aaKnown RBP eCLIP12.78□□□□□ -0.365e-9■■■□□ 16.3
DDB1-206ENST00000535283 ARHGEF25Q86VW2 580 aa12.78□□□□□ -0.36
DDB1-206ENST00000535283 PLEKHF1Q96S99 279 aa12.78□□□□□ -0.36
DDB1-206ENST00000535283 COL24A1Q17RW2 1714 aa12.78□□□□□ -0.36
DDB1-206ENST00000535283 ZBTB7CA1YPR0 619 aa12.77□□□□□ -0.37
DDB1-206ENST00000535283 TMPOP42166 694 aaKnown RBP12.77□□□□□ -0.37
DDB1-206ENST00000535283 RIPK4P57078 832 aa12.77□□□□□ -0.37
DDB1-206ENST00000535283 NEUROD2Q15784 382 aa12.77□□□□□ -0.37
DDB1-206ENST00000535283 ZNF827Q17R98 1081 aa12.77□□□□□ -0.37
DDB1-206ENST00000535283 SULT6B1Q6IMI4 303 aa12.77□□□□□ -0.37
DDB1-206ENST00000535283 WWC1Q8IX03 1113 aa12.77□□□□□ -0.37
DDB1-206ENST00000535283 TUBGCP6Q96RT7 1819 aa12.76□□□□□ -0.37
DDB1-206ENST00000535283 CAPN15O75808 1086 aa12.76□□□□□ -0.37
DDB1-206ENST00000535283 HMOX1P09601 288 aa12.76□□□□□ -0.37
DDB1-206ENST00000535283 NFE2L2Q16236 605 aa12.76□□□□□ -0.37
DDB1-206ENST00000535283 GAS2L2Q8NHY3 880 aa12.76□□□□□ -0.37
DDB1-206ENST00000535283 ZNF526Q8TF50 670 aaPredicted RBP12.76□□□□□ -0.37
DDB1-206ENST00000535283 IL16Q14005 1332 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms