RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 KRT32Q14532 448 aa21.41■■□□□ 1.02
SFSWAP-203ENST00000535236 MVPQ14764 893 aaKnown RBP21.41■■□□□ 1.02
SFSWAP-203ENST00000535236 WASF1Q92558 559 aa21.41■■□□□ 1.02
SFSWAP-203ENST00000535236 CCDC85AQ96PX6 553 aaPredicted RBP21.41■■□□□ 1.02
SFSWAP-203ENST00000535236 RPGRIP1LQ68CZ1 1315 aa21.41■■□□□ 1.02
SFSWAP-203ENST00000535236 GOLGA6L10A6NI86 522 aa21.41■■□□□ 1.02
SFSWAP-203ENST00000535236 CWC27Q6UX04 472 aaKnown RBP21.41■■□□□ 1.02
SFSWAP-203ENST00000535236 AIDAQ96BJ3 306 aa21.41■■□□□ 1.02
SFSWAP-203ENST00000535236 USP5P45974 858 aa21.4■■□□□ 1.02
SFSWAP-203ENST00000535236 ZSCAN31Q96LW9 406 aaPredicted RBP21.4■■□□□ 1.02
SFSWAP-203ENST00000535236 JAKMIP1Q96N16 626 aaKnown RBP21.4■■□□□ 1.02
SFSWAP-203ENST00000535236 ERBINQ96RT1 1412 aa21.4■■□□□ 1.02
SFSWAP-203ENST00000535236 ANKRD62A6NC57 917 aa21.4■■□□□ 1.02
SFSWAP-203ENST00000535236 K7ELQ4 463 aaPredicted RBP21.4■■□□□ 1.02
SFSWAP-203ENST00000535236 DESP17661 470 aa21.4■■□□□ 1.02
SFSWAP-203ENST00000535236 CHD1LQ86WJ1 897 aa21.4■■□□□ 1.02
SFSWAP-203ENST00000535236 KIAA1107Q9UPP5 1409 aa21.4■■□□□ 1.02
SFSWAP-203ENST00000535236 GNAT3A8MTJ3 354 aa21.39■■□□□ 1.01
SFSWAP-203ENST00000535236 PIBF1Q8WXW3 757 aa21.39■■□□□ 1.01
SFSWAP-203ENST00000535236 IL1RAPL2Q9NP60 686 aa21.39■■□□□ 1.01
SFSWAP-203ENST00000535236 ZNF652Q9Y2D9 606 aa21.39■■□□□ 1.01
SFSWAP-203ENST00000535236 CFTRP13569 1480 aa21.39■■□□□ 1.01
SFSWAP-203ENST00000535236 KCNH5Q8NCM2 988 aa21.39■■□□□ 1.01
SFSWAP-203ENST00000535236 SPATA32Q96LK8 384 aa21.39■■□□□ 1.01
SFSWAP-203ENST00000535236 ABCF2Q9UG63 623 aa21.38■■□□□ 1.01
SFSWAP-203ENST00000535236 IMMTQ16891 758 aaKnown RBP21.38■■□□□ 1.01
SFSWAP-203ENST00000535236 TSPYL1Q9H0U9 437 aa21.38■■□□□ 1.01
SFSWAP-203ENST00000535236 CFAP45Q9UL16 551 aa21.38■■□□□ 1.01
SFSWAP-203ENST00000535236 FCHSD2O94868 740 aa21.37■■□□□ 1.01
SFSWAP-203ENST00000535236 METTL24Q5JXM2 366 aa21.37■■□□□ 1.01
SFSWAP-203ENST00000535236 CEP57L1Q8IYX8 460 aa21.37■■□□□ 1.01
SFSWAP-203ENST00000535236 MTERF4Q7Z6M4 381 aaKnown RBP21.37■■□□□ 1.01
SFSWAP-203ENST00000535236 CALRP27797 417 aaKnown RBP21.37■■□□□ 1.01
SFSWAP-203ENST00000535236 NEBLO76041 1014 aa21.37■■□□□ 1.01
SFSWAP-203ENST00000535236 RAPGEF3O95398 923 aa21.37■■□□□ 1.01
SFSWAP-203ENST00000535236 ZNF287Q9HBT7 754 aa21.37■■□□□ 1.01
SFSWAP-203ENST00000535236 PPP6R1Q9UPN7 881 aa21.36■■□□□ 1.01
SFSWAP-203ENST00000535236 ANKRD30BQ9BXX2 1392 aa21.36■■□□□ 1.01
SFSWAP-203ENST00000535236 ZPR1O75312 459 aa21.35■■□□□ 1.01
SFSWAP-203ENST00000535236 RPAP2Q8IXW5 612 aaPredicted RBP21.35■■□□□ 1.01
SFSWAP-203ENST00000535236 TMOD3Q9NYL9 352 aa21.35■■□□□ 1.01
SFSWAP-203ENST00000535236 AKAP2Q9Y2D5 859 aa21.35■■□□□ 1.01
SFSWAP-203ENST00000535236 IBSPP21815 317 aaPredicted RBP21.34■■□□□ 1.01
SFSWAP-203ENST00000535236 NFE2L2Q16236 605 aa21.34■■□□□ 1.01
SFSWAP-203ENST00000535236 HMGN5P82970 282 aaKnown RBP21.34■■□□□ 1.01
SFSWAP-203ENST00000535236 NUDT16Q96DE0 195 aaKnown RBP21.34■■□□□ 1.01
SFSWAP-203ENST00000535236 CAVIN4Q5BKX8 364 aa21.34■■□□□ 1.01
SFSWAP-203ENST00000535236 TRIM21P19474 475 aaKnown RBP21.34■■□□□ 1.01
SFSWAP-203ENST00000535236 CRACR2BQ8N4Y2 399 aaPredicted RBP21.34■■□□□ 1.01
SFSWAP-203ENST00000535236 LEKR1Q6ZMV7 388 aa21.33■■□□□ 1.01
SFSWAP-203ENST00000535236 CEP131Q9UPN4 1083 aa21.33■■□□□ 1.01
SFSWAP-203ENST00000535236 TNIP1Q15025 636 aa21.33■■□□□ 1.01
SFSWAP-203ENST00000535236 ENOX2Q16206 610 aaKnown RBP21.33■■□□□ 1
SFSWAP-203ENST00000535236 POLR3DP05423 398 aaPredicted RBP21.33■■□□□ 1
SFSWAP-203ENST00000535236 SEC63Q9UGP8 760 aaKnown RBP21.33■■□□□ 1
SFSWAP-203ENST00000535236 NUTM1Q86Y26 1132 aa21.32■■□□□ 1
SFSWAP-203ENST00000535236 PTCD1O75127 700 aaKnown RBP21.31■■□□□ 1
SFSWAP-203ENST00000535236 IFIT1P09914 478 aaKnown RBP21.31■■□□□ 1
SFSWAP-203ENST00000535236 FAM177A1Q8N128 213 aaPredicted RBP21.31■■□□□ 1
SFSWAP-203ENST00000535236 EIF5P55010 431 aaKnown RBP21.3■■□□□ 1
SFSWAP-203ENST00000535236 NUP62CLQ9H1M0 184 aa21.3■■□□□ 1
SFSWAP-203ENST00000535236 CCDC61Q9Y6R9 512 aa21.3■■□□□ 1
SFSWAP-203ENST00000535236 WDHD1O75717 1129 aaPredicted RBP21.3■■□□□ 1
SFSWAP-203ENST00000535236 EHBP1L1Q8N3D4 1523 aa21.3■■□□□ 1
SFSWAP-203ENST00000535236 UPF3BQ9BZI7 483 aaKnown RBP21.3■■□□□ 1
SFSWAP-203ENST00000535236 MKNK2Q9HBH9 465 aa21.3■■□□□ 1
SFSWAP-203ENST00000535236 ERLIN1O75477 346 aa21.29■■□□□ 1
SFSWAP-203ENST00000535236 IQCEQ6IPM2 695 aa21.29■■□□□ 1
SFSWAP-203ENST00000535236 POTEJP0CG39 1038 aa21.29■■□□□ 1
SFSWAP-203ENST00000535236 ERICH3Q5RHP9 1530 aa21.29■■□□□ 1
SFSWAP-203ENST00000535236 SMTNL1A8MU46 457 aa21.29■■□□□ 1
SFSWAP-203ENST00000535236 LARP1Q6PKG0 1096 aaKnown RBP21.29■■□□□ 1
SFSWAP-203ENST00000535236 PPP1R12BO60237 982 aaPredicted RBP21.29■■□□□ 1
SFSWAP-203ENST00000535236 ANKIB1Q9P2G1 1089 aa21.29■■□□□ 1
SFSWAP-203ENST00000535236 CASTP20810 708 aaKnown RBP21.29■■□□□ 1
SFSWAP-203ENST00000535236 SSR1P43307 286 aaKnown RBP21.29■■□□□ 1
SFSWAP-203ENST00000535236 TAX1BP1Q86VP1 789 aa21.28■■□□□ 1
SFSWAP-203ENST00000535236 SCLT1Q96NL6 688 aa21.28■■□□□ 1
SFSWAP-203ENST00000535236 U3KPZ7 1027 aaPredicted RBP21.28■■□□□ 1
SFSWAP-203ENST00000535236 DUSP27Q5VZP5 1158 aa21.28■■□□□ 1
SFSWAP-203ENST00000535236 CCDC112Q8NEF3 446 aa21.28■■□□□ 1
SFSWAP-203ENST00000535236 KIF1BPQ96EK5 621 aa21.28■■□□□ 1
SFSWAP-203ENST00000535236 DDX11Q96FC9 970 aa21.28■■□□□ 1
SFSWAP-203ENST00000535236 DNAI2Q9GZS0 605 aa21.28■■□□□ 1
SFSWAP-203ENST00000535236 MIS18AQ9NYP9 233 aa21.28■■□□□ 1
SFSWAP-203ENST00000535236 MINDY4BA8MYZ0 360 aa21.28■■□□□ 1
SFSWAP-203ENST00000535236 PDIA4P13667 645 aaKnown RBP21.28■■□□□ 1
SFSWAP-203ENST00000535236 TAF4BQ92750 862 aa21.28■■□□□ 1
SFSWAP-203ENST00000535236 CENPHQ9H3R5 247 aa21.28■■□□□ 1
SFSWAP-203ENST00000535236 EZRP15311 586 aaKnown RBP21.27■■□□□ 1
SFSWAP-203ENST00000535236 NBPF8Q3BBV2 869 aa21.27■■□□□ 1
SFSWAP-203ENST00000535236 JAKMIP3Q5VZ66 844 aa21.27■■□□□ 1
SFSWAP-203ENST00000535236 DZIP1Q86YF9 867 aaKnown RBP21.27■■□□□ 1
SFSWAP-203ENST00000535236 MYD88Q99836 296 aa21.27■■□□□ 1
SFSWAP-203ENST00000535236 NSD3Q9BZ95 1437 aa21.26■□□□□ 0.99
SFSWAP-203ENST00000535236 TMPOP42166 694 aaKnown RBP21.26■□□□□ 0.99
SFSWAP-203ENST00000535236 PPP4R3AQ6IN85 833 aa21.26■□□□□ 0.99
SFSWAP-203ENST00000535236 TROQ12816 1431 aaPredicted RBP21.26■□□□□ 0.99
SFSWAP-203ENST00000535236 EXOC6BQ9Y2D4 811 aa21.26■□□□□ 0.99
SFSWAP-203ENST00000535236 RAB11FIP3O75154 756 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms