RNA–Protein interactions for RNA: ENST00000534763.1

CCS-209, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-209ENST00000534763 APBA3O96018 575 aa17.5■□□□□ 0.39
CCS-209ENST00000534763 PLSCR1O15162 318 aa17.49■□□□□ 0.39
CCS-209ENST00000534763 CAMKK2Q96RR4 588 aa17.49■□□□□ 0.39
CCS-209ENST00000534763 PCDH11XQ9BZA7 1347 aa17.48■□□□□ 0.39
CCS-209ENST00000534763 PCDH11YQ9BZA8 1340 aa17.48■□□□□ 0.39
CCS-209ENST00000534763 IL13P35225 146 aa17.48■□□□□ 0.39
CCS-209ENST00000534763 EN1Q05925 392 aaPredicted RBP17.48■□□□□ 0.39
CCS-209ENST00000534763 DDX54Q8TDD1 881 aaKnown RBP17.48■□□□□ 0.39
CCS-209ENST00000534763 SPG7Q9UQ90 795 aa17.47■□□□□ 0.39
CCS-209ENST00000534763 SBF2Q86WG5 1849 aa17.47■□□□□ 0.39
CCS-209ENST00000534763 KDRP35968 1356 aa17.46■□□□□ 0.39
CCS-209ENST00000534763 RGPD3A6NKT7 1758 aaPredicted RBP17.45■□□□□ 0.38
CCS-209ENST00000534763 RGPD4Q7Z3J3 1758 aa17.45■□□□□ 0.38
CCS-209ENST00000534763 NHSQ6T4R5 1651 aa17.45■□□□□ 0.38
CCS-209ENST00000534763 PKD1L3Q7Z443 1732 aa17.44■□□□□ 0.38
CCS-209ENST00000534763 SHANK3Q9BYB0 1731 aa17.44■□□□□ 0.38
CCS-209ENST00000534763 DIAPH1O60610 1272 aaKnown RBP17.44■□□□□ 0.38
CCS-209ENST00000534763 NKX1-1Q15270 411 aaPredicted RBP17.44■□□□□ 0.38
CCS-209ENST00000534763 EZH2Q15910 746 aaKnown RBP17.44■□□□□ 0.38
CCS-209ENST00000534763 KCNQ2O43526 872 aa17.43■□□□□ 0.38
CCS-209ENST00000534763 CYP27B1O15528 508 aa17.42■□□□□ 0.38
CCS-209ENST00000534763 AMOTQ4VCS5 1084 aa17.42■□□□□ 0.38
CCS-209ENST00000534763 PTF1AQ7RTS3 328 aa17.42■□□□□ 0.38
CCS-209ENST00000534763 COL3A1P02461 1466 aaPredicted RBP17.42■□□□□ 0.38
CCS-209ENST00000534763 PPP2R1AP30153 589 aa17.41■□□□□ 0.38
CCS-209ENST00000534763 SULT6B1Q6IMI4 303 aa17.41■□□□□ 0.38
CCS-209ENST00000534763 ACSBG1Q96GR2 724 aa17.41■□□□□ 0.38
CCS-209ENST00000534763 CFAP53Q96M91 514 aa17.41■□□□□ 0.38
CCS-209ENST00000534763 PLEKHO1Q53GL0 409 aaPredicted RBP17.4■□□□□ 0.38
CCS-209ENST00000534763 IFNL2Q8IZJ0 200 aa17.4■□□□□ 0.38
CCS-209ENST00000534763 RREB1Q92766 1687 aa17.39■□□□□ 0.37
CCS-209ENST00000534763 PRIM1P49642 420 aaKnown RBP17.39■□□□□ 0.37
CCS-209ENST00000534763 DDX10Q13206 875 aaKnown RBP17.39■□□□□ 0.37
CCS-209ENST00000534763 PHKG2P15735 406 aa17.38■□□□□ 0.37
CCS-209ENST00000534763 CNGB1Q14028 1251 aaPredicted RBP17.38■□□□□ 0.37
CCS-209ENST00000534763 RALBP1Q15311 655 aa17.38■□□□□ 0.37
CCS-209ENST00000534763 AEBP1Q8IUX7 1158 aa17.38■□□□□ 0.37
CCS-209ENST00000534763 HSP90AB1P08238 724 aaKnown RBP17.37■□□□□ 0.37
CCS-209ENST00000534763 PROM2Q8N271 834 aa17.37■□□□□ 0.37
CCS-209ENST00000534763 NBPF14Q5TI25 921 aa17.36■□□□□ 0.37
CCS-209ENST00000534763 NUDCQ9Y266 331 aa17.36■□□□□ 0.37
CCS-209ENST00000534763 TXNRD1Q16881 649 aa17.35■□□□□ 0.37
CCS-209ENST00000534763 SYTL4Q96C24 671 aaPredicted RBP17.35■□□□□ 0.37
CCS-209ENST00000534763 DOT1LQ8TEK3 1739 aa17.35■□□□□ 0.37
CCS-209ENST00000534763 BTAF1O14981 1849 aa17.34■□□□□ 0.37
CCS-209ENST00000534763 HMGB2P26583 209 aaKnown RBP17.34■□□□□ 0.37
CCS-209ENST00000534763 SLC27A3Q5K4L6 730 aa17.34■□□□□ 0.37
CCS-209ENST00000534763 DCAF5Q96JK2 942 aa17.34■□□□□ 0.37
CCS-209ENST00000534763 NUP188Q5SRE5 1749 aa17.33■□□□□ 0.37
CCS-209ENST00000534763 ERVV-2B6SEH9 535 aa17.32■□□□□ 0.36
CCS-209ENST00000534763 HMOX1P09601 288 aa17.32■□□□□ 0.36
CCS-209ENST00000534763 ZNF530Q6P9A1 599 aaPredicted RBP17.32■□□□□ 0.36
CCS-209ENST00000534763 ZNF316A6NFI3 1004 aaPredicted RBP17.31■□□□□ 0.36
CCS-209ENST00000534763 U2SURPO15042 1029 aaKnown RBP17.31■□□□□ 0.36
CCS-209ENST00000534763 C1orf141Q5JVX7 400 aa17.31■□□□□ 0.36
CCS-209ENST00000534763 AKAP4Q5JQC9 854 aa17.3■□□□□ 0.36
CCS-209ENST00000534763 MPRIPQ6WCQ1 1025 aa17.3■□□□□ 0.36
CCS-209ENST00000534763 SMARCC1Q92922 1105 aaPredicted RBP17.3■□□□□ 0.36
CCS-209ENST00000534763 FCHSD2O94868 740 aa17.29■□□□□ 0.36
CCS-209ENST00000534763 PIGBQ92521 554 aa17.29■□□□□ 0.36
CCS-209ENST00000534763 TMOD3Q9NYL9 352 aa17.29■□□□□ 0.36
CCS-209ENST00000534763 TOGARAM1Q9Y4F4 1720 aa17.29■□□□□ 0.36
CCS-209ENST00000534763 MYBBP1AQ9BQG0 1328 aaKnown RBP17.28■□□□□ 0.36
CCS-209ENST00000534763 R3HDM1Q15032 1099 aaKnown RBP17.28■□□□□ 0.36
CCS-209ENST00000534763 RSPH6AQ9H0K4 717 aa17.27■□□□□ 0.36
CCS-209ENST00000534763 LRRC4BQ9NT99 713 aa17.27■□□□□ 0.36
CCS-209ENST00000534763 KDM6AO15550 1401 aaPredicted RBP17.27■□□□□ 0.35
CCS-209ENST00000534763 PSDA5PKW4 1024 aaPredicted RBP17.26■□□□□ 0.35
CCS-209ENST00000534763 U2AF1L5P0DN76 240 aaPredicted RBP17.26■□□□□ 0.35
CCS-209ENST00000534763 U2AF1Q01081 240 aaKnown RBP eCLIP17.26■□□□□ 0.35
CCS-209ENST00000534763 SLC15A2Q16348 729 aa17.26■□□□□ 0.35
CCS-209ENST00000534763 MTHFSDQ2M296 383 aaKnown RBP17.26■□□□□ 0.35
CCS-209ENST00000534763 GAS2L2Q8NHY3 880 aa17.26■□□□□ 0.35
CCS-209ENST00000534763 STK32BQ9NY57 414 aa17.26■□□□□ 0.35
CCS-209ENST00000534763 LY75O60449 1722 aa17.26■□□□□ 0.35
CCS-209ENST00000534763 PALLDQ8WX93 1383 aa17.26■□□□□ 0.35
CCS-209ENST00000534763 PAPPAQ13219 1627 aa17.25■□□□□ 0.35
CCS-209ENST00000534763 PRKRIP1Q9H875 184 aaPredicted RBP17.25■□□□□ 0.35
CCS-209ENST00000534763 ANO8Q9HCE9 1232 aaPredicted RBP17.25■□□□□ 0.35
CCS-209ENST00000534763 ITGB4P16144 1822 aa17.24■□□□□ 0.35
CCS-209ENST00000534763 CABP4P57796 275 aa17.24■□□□□ 0.35
CCS-209ENST00000534763 CCNL1Q9UK58 526 aaPredicted RBP17.24■□□□□ 0.35
CCS-209ENST00000534763 PRKAR2BP31323 418 aa17.23■□□□□ 0.35
CCS-209ENST00000534763 PNNQ9H307 717 aaKnown RBP17.23■□□□□ 0.35
CCS-209ENST00000534763 AKT1S1Q96B36 256 aa17.22■□□□□ 0.35
CCS-209ENST00000534763 ATG3Q9NT62 314 aa17.22■□□□□ 0.35
CCS-209ENST00000534763 ADAMTS7Q9UKP4 1686 aa17.22■□□□□ 0.35
CCS-209ENST00000534763 MRC1P22897 1456 aa17.21■□□□□ 0.35
CCS-209ENST00000534763 GNAT3A8MTJ3 354 aa17.21■□□□□ 0.35
CCS-209ENST00000534763 RNMTO43148 476 aaKnown RBP17.21■□□□□ 0.35
CCS-209ENST00000534763 PHACTR3Q96KR7 559 aa17.21■□□□□ 0.35
CCS-209ENST00000534763 ASAP1Q9ULH1 1129 aa17.21■□□□□ 0.35
CCS-209ENST00000534763 MAP3K5Q99683 1374 aa17.2■□□□□ 0.34
CCS-209ENST00000534763 LOC102724428A0A0B4J2F2 783 aa17.2■□□□□ 0.34
CCS-209ENST00000534763 SIK1P57059 783 aa17.2■□□□□ 0.34
CCS-209ENST00000534763 NFATC2IPQ8NCF5 419 aa17.2■□□□□ 0.34
CCS-209ENST00000534763 SLC52A2Q9HAB3 445 aa17.2■□□□□ 0.34
CCS-209ENST00000534763 LRP5O75197 1615 aa17.19■□□□□ 0.34
CCS-209ENST00000534763 LGR6Q9HBX8 967 aa17.19■□□□□ 0.34
CCS-209ENST00000534763 KAT6BQ8WYB5 2073 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms