RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 ZNF530Q6P9A1 599 aaPredicted RBP8.27□□□□□ -1.09
CTNND1-236ENST00000533667 PDCL2Q8N4E4 241 aa8.27□□□□□ -1.09
CTNND1-236ENST00000533667 ESCO1Q5FWF5 840 aa8.27□□□□□ -1.09
CTNND1-236ENST00000533667 DHX29Q7Z478 1369 aaKnown RBP8.26□□□□□ -1.09
CTNND1-236ENST00000533667 SYCP1Q15431 976 aa8.26□□□□□ -1.09
CTNND1-236ENST00000533667 DEF6Q9H4E7 631 aa8.26□□□□□ -1.09
CTNND1-236ENST00000533667 TOPBP1Q92547 1522 aa8.26□□□□□ -1.09
CTNND1-236ENST00000533667 ESPNB1AK53 854 aa8.26□□□□□ -1.09
CTNND1-236ENST00000533667 TMPOP42166 694 aaKnown RBP8.26□□□□□ -1.09
CTNND1-236ENST00000533667 DCAF8L1A6NGE4 600 aa8.26□□□□□ -1.09
CTNND1-236ENST00000533667 SRGAP3O43295 1099 aa8.26□□□□□ -1.09
CTNND1-236ENST00000533667 CCDC57Q2TAC2 916 aa8.26□□□□□ -1.09
CTNND1-236ENST00000533667 NSD3Q9BZ95 1437 aa8.26□□□□□ -1.09
CTNND1-236ENST00000533667 GOLGA6L10A6NI86 522 aa8.25□□□□□ -1.09
CTNND1-236ENST00000533667 ATP2B1P20020 1258 aa8.25□□□□□ -1.09
CTNND1-236ENST00000533667 CABP4P57796 275 aa8.25□□□□□ -1.09
CTNND1-236ENST00000533667 AACSQ86V21 672 aa8.25□□□□□ -1.09
CTNND1-236ENST00000533667 NKTRP30414 1462 aaKnown RBP8.25□□□□□ -1.09
CTNND1-236ENST00000533667 KRT18P05783 430 aaKnown RBP8.25□□□□□ -1.09
CTNND1-236ENST00000533667 USP8P40818 1118 aa8.25□□□□□ -1.09
CTNND1-236ENST00000533667 MEX3CQ5U5Q3 659 aaKnown RBP8.25□□□□□ -1.09
CTNND1-236ENST00000533667 PLCD4Q9BRC7 762 aa8.25□□□□□ -1.09
CTNND1-236ENST00000533667 IKQ13123 557 aaPredicted RBP8.25□□□□□ -1.09
CTNND1-236ENST00000533667 SPC24Q8NBT2 197 aa8.25□□□□□ -1.09
CTNND1-236ENST00000533667 EPRSP07814 1512 aaKnown RBP8.25□□□□□ -1.09
CTNND1-236ENST00000533667 ZSCAN30Q86W11 494 aa8.25□□□□□ -1.09
CTNND1-236ENST00000533667 KIF1BPQ96EK5 621 aa8.25□□□□□ -1.09
CTNND1-236ENST00000533667 JAKMIP1Q96N16 626 aaKnown RBP8.25□□□□□ -1.09
CTNND1-236ENST00000533667 GLRX3O76003 335 aaKnown RBP8.24□□□□□ -1.09
CTNND1-236ENST00000533667 ZFYVE27Q5T4F4 411 aa8.24□□□□□ -1.09
CTNND1-236ENST00000533667 SH2B1Q9NRF2 756 aaPredicted RBP8.24□□□□□ -1.09
CTNND1-236ENST00000533667 CEP126Q9P2H0 1117 aa8.24□□□□□ -1.09
CTNND1-236ENST00000533667 CEP131Q9UPN4 1083 aa8.24□□□□□ -1.09
CTNND1-236ENST00000533667 DNMBPQ6XZF7 1577 aa8.24□□□□□ -1.09
CTNND1-236ENST00000533667 MAP3K11Q16584 847 aa8.24□□□□□ -1.09
CTNND1-236ENST00000533667 SOGA3Q5TF21 947 aa8.24□□□□□ -1.09
CTNND1-236ENST00000533667 TTLL5Q6EMB2 1281 aa8.24□□□□□ -1.09
CTNND1-236ENST00000533667 UPF3BQ9BZI7 483 aaKnown RBP8.24□□□□□ -1.09
CTNND1-236ENST00000533667 KIAA0586Q9BVV6 1533 aa8.24□□□□□ -1.09
CTNND1-236ENST00000533667 CEBPZQ03701 1054 aaKnown RBP8.24□□□□□ -1.09
CTNND1-236ENST00000533667 PROSER2Q86WR7 435 aaPredicted RBP8.24□□□□□ -1.09
CTNND1-236ENST00000533667 BRPF1P55201 1214 aaPredicted RBP8.24□□□□□ -1.09
CTNND1-236ENST00000533667 TMEM57Q8N5G2 664 aa8.24□□□□□ -1.09
CTNND1-236ENST00000533667 RBM42Q9BTD8 480 aaKnown RBP8.24□□□□□ -1.09
CTNND1-236ENST00000533667 FBXO3Q9UK99 471 aa8.24□□□□□ -1.09
CTNND1-236ENST00000533667 CCDC181Q5TID7 509 aa8.23□□□□□ -1.09
CTNND1-236ENST00000533667 SCAND2PQ9GZW5 306 aaPredicted RBP8.23□□□□□ -1.09
CTNND1-236ENST00000533667 BMP2KQ9NSY1 1161 aaPredicted RBP8.23□□□□□ -1.09
CTNND1-236ENST00000533667 NSD2O96028 1365 aa8.23□□□□□ -1.09
CTNND1-236ENST00000533667 KLHL34Q8N239 644 aa8.23□□□□□ -1.09
CTNND1-236ENST00000533667 PSMD1Q99460 953 aa8.23□□□□□ -1.09
CTNND1-236ENST00000533667 GNAT3A8MTJ3 354 aa8.23□□□□□ -1.09
CTNND1-236ENST00000533667 STK3Q13188 491 aa8.23□□□□□ -1.09
CTNND1-236ENST00000533667 KCNH5Q8NCM2 988 aa8.23□□□□□ -1.09
CTNND1-236ENST00000533667 MPHOSPH8Q99549 860 aa8.23□□□□□ -1.09
CTNND1-236ENST00000533667 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.23□□□□□ -1.091e-6■■■■■ 38.5
CTNND1-236ENST00000533667 RBM28Q9NW13 759 aaKnown RBP8.23□□□□□ -1.09
CTNND1-236ENST00000533667 CCDC61Q9Y6R9 512 aa8.23□□□□□ -1.09
CTNND1-236ENST00000533667 MX1P20591 662 aa8.23□□□□□ -1.09
CTNND1-236ENST00000533667 ZRSR2Q15696 482 aaKnown RBP8.23□□□□□ -1.09
CTNND1-236ENST00000533667 IMMTQ16891 758 aaKnown RBP8.23□□□□□ -1.09
CTNND1-236ENST00000533667 PAIP2Q9BPZ3 127 aaKnown RBP8.23□□□□□ -1.09
CTNND1-236ENST00000533667 UBAC1Q9BSL1 405 aa8.23□□□□□ -1.09
CTNND1-236ENST00000533667 GBP3Q9H0R5 595 aa8.23□□□□□ -1.09
CTNND1-236ENST00000533667 UQCRHLA0A096LP55 91 aa8.22□□□□□ -1.09
CTNND1-236ENST00000533667 GOLGA6L7A0A1B0GV03 622 aa8.22□□□□□ -1.09
CTNND1-236ENST00000533667 BTBD11A6QL63 1104 aa8.22□□□□□ -1.09
CTNND1-236ENST00000533667 UQCRHP07919 91 aa8.22□□□□□ -1.09
CTNND1-236ENST00000533667 RARSP54136 660 aaKnown RBP8.22□□□□□ -1.09
CTNND1-236ENST00000533667 POGZQ7Z3K3 1410 aa8.22□□□□□ -1.09
CTNND1-236ENST00000533667 CWC27Q6UX04 472 aaKnown RBP8.22□□□□□ -1.09
CTNND1-236ENST00000533667 ANKRD18AQ8IVF6 992 aa8.22□□□□□ -1.09
CTNND1-236ENST00000533667 U3KPZ7 1027 aaPredicted RBP8.22□□□□□ -1.09
CTNND1-236ENST00000533667 LRPPRCP42704 1394 aaKnown RBP8.22□□□□□ -1.09
CTNND1-236ENST00000533667 KIAA0754O94854 1291 aa8.22□□□□□ -1.09
CTNND1-236ENST00000533667 WWC2Q6AWC2 1192 aa8.22□□□□□ -1.09
CTNND1-236ENST00000533667 SIL1Q9H173 461 aa8.22□□□□□ -1.09
CTNND1-236ENST00000533667 AKAP2Q9Y2D5 859 aa8.22□□□□□ -1.09
CTNND1-236ENST00000533667 CTAGE5O15320 804 aa8.22□□□□□ -1.09
CTNND1-236ENST00000533667 CCDC183Q5T5S1 534 aa8.22□□□□□ -1.09
CTNND1-236ENST00000533667 CALCOCO1Q9P1Z2 691 aa8.21□□□□□ -1.09
CTNND1-236ENST00000533667 ANO10Q9NW15 660 aa8.21□□□□□ -1.09
CTNND1-236ENST00000533667 MTMR7Q9Y216 660 aa8.21□□□□□ -1.09
CTNND1-236ENST00000533667 SNAPC4Q5SXM2 1469 aa8.21□□□□□ -1.1
CTNND1-236ENST00000533667 CASTP20810 708 aaKnown RBP8.21□□□□□ -1.1
CTNND1-236ENST00000533667 CCDC184Q52MB2 194 aa8.21□□□□□ -1.1
CTNND1-236ENST00000533667 CUL7Q14999 1698 aa8.21□□□□□ -1.1
CTNND1-236ENST00000533667 PTPN23Q9H3S7 1636 aa8.21□□□□□ -1.1
CTNND1-236ENST00000533667 ZSCAN12O43309 604 aa8.21□□□□□ -1.1
CTNND1-236ENST00000533667 PHAXQ9H814 394 aaKnown RBP8.21□□□□□ -1.1
CTNND1-236ENST00000533667 NEMFO60524 1076 aa8.2□□□□□ -1.1
CTNND1-236ENST00000533667 TDO2P48775 406 aa8.2□□□□□ -1.1
CTNND1-236ENST00000533667 FAM193AP78312 1265 aa8.2□□□□□ -1.1
CTNND1-236ENST00000533667 LARP1Q6PKG0 1096 aaKnown RBP8.2□□□□□ -1.1
CTNND1-236ENST00000533667 IPO4Q8TEX9 1081 aaKnown RBP8.2□□□□□ -1.1
CTNND1-236ENST00000533667 PTPRCP08575 1304 aa8.2□□□□□ -1.1
CTNND1-236ENST00000533667 ABCA10Q8WWZ4 1543 aa8.2□□□□□ -1.1
CTNND1-236ENST00000533667 IQGAP2Q13576 1575 aa8.2□□□□□ -1.1
CTNND1-236ENST00000533667 CCDC196A0A1B0GTZ2 297 aa8.2□□□□□ -1.1
CTNND1-236ENST00000533667 EPB41L2O43491 1005 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms