RNA–Protein interactions for RNA: ENST00000533476.5

UBXN1-215, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 1,912 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-215ENST00000533476 ANKLE2Q86XL3 938 aa24.31■■□□□ 1.48
UBXN1-215ENST00000533476 TBC1D32Q96NH3 1257 aa24.3■■□□□ 1.48
UBXN1-215ENST00000533476 GCC1Q96CN9 775 aa24.29■■□□□ 1.48
UBXN1-215ENST00000533476 EYA1Q99502 592 aa24.29■■□□□ 1.48
UBXN1-215ENST00000533476 MTHFSDQ2M296 383 aaKnown RBP24.28■■□□□ 1.48
UBXN1-215ENST00000533476 LRRC37A3O60309 1634 aa24.28■■□□□ 1.48
UBXN1-215ENST00000533476 CHD1LQ86WJ1 897 aa24.27■■□□□ 1.48
UBXN1-215ENST00000533476 RGS12O14924 1447 aa24.27■■□□□ 1.48
UBXN1-215ENST00000533476 NWD1Q149M9 1564 aa24.27■■□□□ 1.48
UBXN1-215ENST00000533476 GAS2L2Q8NHY3 880 aa24.26■■□□□ 1.47
UBXN1-215ENST00000533476 HOXC9P31274 260 aa24.25■■□□□ 1.47
UBXN1-215ENST00000533476 KRT24Q2M2I5 525 aa24.25■■□□□ 1.47
UBXN1-215ENST00000533476 INTS3Q68E01 1043 aaKnown RBP24.25■■□□□ 1.47
UBXN1-215ENST00000533476 RTF1Q92541 710 aaKnown RBP24.25■■□□□ 1.47
UBXN1-215ENST00000533476 C1orf115Q9H7X2 142 aa24.25■■□□□ 1.47
UBXN1-215ENST00000533476 RTL1A6NKG5 1358 aa24.25■■□□□ 1.47
UBXN1-215ENST00000533476 BECN1Q14457 450 aa24.24■■□□□ 1.47
UBXN1-215ENST00000533476 LMTK3Q96Q04 1460 aa24.24■■□□□ 1.47
UBXN1-215ENST00000533476 ADGRL3Q9HAR2 1447 aa24.24■■□□□ 1.47
UBXN1-215ENST00000533476 FOXO3O43524 673 aa24.23■■□□□ 1.47
UBXN1-215ENST00000533476 PHF8Q9UPP1 1060 aa24.23■■□□□ 1.47
UBXN1-215ENST00000533476 PTPRCP08575 1304 aa24.23■■□□□ 1.47
UBXN1-215ENST00000533476 HTATSF1O43719 755 aaKnown RBP24.23■■□□□ 1.47
UBXN1-215ENST00000533476 SIRT2Q8IXJ6 389 aa24.23■■□□□ 1.47
UBXN1-215ENST00000533476 ABTB2Q8N961 1025 aa24.23■■□□□ 1.47
UBXN1-215ENST00000533476 LNPKQ9C0E8 428 aa24.23■■□□□ 1.47
UBXN1-215ENST00000533476 LTN1O94822 1766 aa24.2■■□□□ 1.46
UBXN1-215ENST00000533476 NUTM2GQ5VZR2 741 aa24.2■■□□□ 1.46
UBXN1-215ENST00000533476 TSPYL4Q9UJ04 414 aa24.2■■□□□ 1.46
UBXN1-215ENST00000533476 NFAT5O94916 1531 aa24.19■■□□□ 1.46
UBXN1-215ENST00000533476 ANKRD45Q5TZF3 282 aa24.18■■□□□ 1.46
UBXN1-215ENST00000533476 BMP2KLQ5H9B9 411 aa24.17■■□□□ 1.46
UBXN1-215ENST00000533476 NFKBIBQ15653 356 aa24.16■■□□□ 1.46
UBXN1-215ENST00000533476 NPHP4O75161 1426 aaPredicted RBP24.16■■□□□ 1.46
UBXN1-215ENST00000533476 ATP10DQ9P241 1426 aa24.16■■□□□ 1.46
UBXN1-215ENST00000533476 MIS18AQ9NYP9 233 aa24.16■■□□□ 1.46
UBXN1-215ENST00000533476 PHRF1Q9P1Y6 1649 aaKnown RBP24.15■■□□□ 1.46
UBXN1-215ENST00000533476 MAP3K5Q99683 1374 aa24.15■■□□□ 1.46
UBXN1-215ENST00000533476 GNAT3A8MTJ3 354 aa24.15■■□□□ 1.46
UBXN1-215ENST00000533476 C22orf23Q9BZE7 217 aa24.15■■□□□ 1.46
UBXN1-215ENST00000533476 MSH6P52701 1360 aa24.14■■□□□ 1.46
UBXN1-215ENST00000533476 MFAP1P55081 439 aaKnown RBP24.14■■□□□ 1.46
UBXN1-215ENST00000533476 FAM208AQ9UK61 1670 aaKnown RBP24.13■■□□□ 1.45
UBXN1-215ENST00000533476 SLC4A2P04920 1241 aa24.13■■□□□ 1.45
UBXN1-215ENST00000533476 C14orf37Q86TY3 774 aa24.12■■□□□ 1.45
UBXN1-215ENST00000533476 ANKRD44Q8N8A2 993 aa24.12■■□□□ 1.45
UBXN1-215ENST00000533476 RPAP2Q8IXW5 612 aaPredicted RBP24.11■■□□□ 1.45
UBXN1-215ENST00000533476 IP6K1Q92551 441 aa24.11■■□□□ 1.45
UBXN1-215ENST00000533476 DCTPP1Q9H773 170 aa24.11■■□□□ 1.45
UBXN1-215ENST00000533476 BABAM1Q9NWV8 329 aa24.11■■□□□ 1.45
UBXN1-215ENST00000533476 SOS1Q07889 1333 aaPredicted RBP24.1■■□□□ 1.45
UBXN1-215ENST00000533476 TBC1D2Q9BYX2 928 aa24.1■■□□□ 1.45
UBXN1-215ENST00000533476 RBM33Q96EV2 1170 aaKnown RBP24.09■■□□□ 1.45
UBXN1-215ENST00000533476 LTV1Q96GA3 475 aaPredicted RBP24.09■■□□□ 1.45
UBXN1-215ENST00000533476 PSME1Q06323 249 aa24.08■■□□□ 1.45
UBXN1-215ENST00000533476 ESCO1Q5FWF5 840 aa24.08■■□□□ 1.45
UBXN1-215ENST00000533476 CEP85Q6P2H3 762 aa24.08■■□□□ 1.44
UBXN1-215ENST00000533476 KCNH5Q8NCM2 988 aa24.08■■□□□ 1.44
UBXN1-215ENST00000533476 CCT4P50991 539 aaKnown RBP24.06■■□□□ 1.44
UBXN1-215ENST00000533476 IL17REQ8NFR9 667 aa24.06■■□□□ 1.44
UBXN1-215ENST00000533476 STK31Q9BXU1 1019 aa24.06■■□□□ 1.44
UBXN1-215ENST00000533476 RBM25P49756 843 aaKnown RBP24.06■■□□□ 1.44
UBXN1-215ENST00000533476 G2E3Q7L622 706 aa24.06■■□□□ 1.44
UBXN1-215ENST00000533476 MEIS3Q99687 375 aa24.06■■□□□ 1.44
UBXN1-215ENST00000533476 SLIT3O75094 1523 aa24.05■■□□□ 1.44
UBXN1-215ENST00000533476 MED1Q15648 1581 aaPredicted RBP24.05■■□□□ 1.44
UBXN1-215ENST00000533476 CACNA1FO60840 1977 aa24.04■■□□□ 1.44
UBXN1-215ENST00000533476 TAF7Q15545 349 aaPredicted RBP24.04■■□□□ 1.44
UBXN1-215ENST00000533476 N4BP2Q86UW6 1770 aaPredicted RBP24.04■■□□□ 1.44
UBXN1-215ENST00000533476 CCDC30Q5VVM6 783 aa24.04■■□□□ 1.44
UBXN1-215ENST00000533476 ANTXR1Q9H6X2 564 aa24.04■■□□□ 1.44
UBXN1-215ENST00000533476 GSE1Q14687 1217 aa24.03■■□□□ 1.44
UBXN1-215ENST00000533476 USHBP1Q8N6Y0 703 aa24.03■■□□□ 1.44
UBXN1-215ENST00000533476 STRCQ7RTU9 1775 aa24.03■■□□□ 1.44
UBXN1-215ENST00000533476 CEMIPQ8WUJ3 1361 aa24.02■■□□□ 1.44
UBXN1-215ENST00000533476 PLEKHM2Q8IWE5 1019 aa24.02■■□□□ 1.44
UBXN1-215ENST00000533476 TRPM3Q9HCF6 1732 aaPredicted RBP24.01■■□□□ 1.43
UBXN1-215ENST00000533476 LMO7Q8WWI1 1683 aa24■■□□□ 1.43
UBXN1-215ENST00000533476 NBPF6Q5VWK0 638 aa24■■□□□ 1.43
UBXN1-215ENST00000533476 NBPF4Q96M43 638 aa24■■□□□ 1.43
UBXN1-215ENST00000533476 KIF1AQ12756 1690 aa24■■□□□ 1.43
UBXN1-215ENST00000533476 F6X3S4 739 aa24■■□□□ 1.43
UBXN1-215ENST00000533476 FRAT2O75474 233 aaPredicted RBP24■■□□□ 1.43
UBXN1-215ENST00000533476 TBC1D9Q6ZT07 1266 aa24■■□□□ 1.43
UBXN1-215ENST00000533476 SLKQ9H2G2 1235 aaPredicted RBP24■■□□□ 1.43
UBXN1-215ENST00000533476 FLIIQ13045 1269 aa23.99■■□□□ 1.43
UBXN1-215ENST00000533476 NCAPD2Q15021 1401 aa23.99■■□□□ 1.43
UBXN1-215ENST00000533476 PXDNLA1KZ92 1463 aa23.99■■□□□ 1.43
UBXN1-215ENST00000533476 RGPD2P0DJD1 1756 aa23.99■■□□□ 1.43
UBXN1-215ENST00000533476 HMMRO75330 724 aa23.98■■□□□ 1.43
UBXN1-215ENST00000533476 SLC4A10Q6U841 1118 aa23.98■■□□□ 1.43
UBXN1-215ENST00000533476 CDC45O75419 566 aa23.98■■□□□ 1.43
UBXN1-215ENST00000533476 KDM3BQ7LBC6 1761 aa23.97■■□□□ 1.43
UBXN1-215ENST00000533476 GSPT1P15170 499 aaKnown RBP23.97■■□□□ 1.43
UBXN1-215ENST00000533476 ORAI2Q96SN7 254 aa23.97■■□□□ 1.43
UBXN1-215ENST00000533476 TTC22Q5TAA0 569 aa23.96■■□□□ 1.43
UBXN1-215ENST00000533476 CAMTA1Q9Y6Y1 1673 aa23.96■■□□□ 1.43
UBXN1-215ENST00000533476 EIF5BO60841 1220 aaKnown RBP23.96■■□□□ 1.43
UBXN1-215ENST00000533476 ARHGEF25Q86VW2 580 aa23.95■■□□□ 1.42
UBXN1-215ENST00000533476 GCP02774 474 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms