RNA–Protein interactions for RNA: ENST00000533413.5

CKAP5-212, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best)

Gene CKAP5, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-212ENST00000533413 VTI1AQ96AJ9 217 aa6.86□□□□□ -1.31
CKAP5-212ENST00000533413 ATXN8OSP0DMR3 200 aa6.85□□□□□ -1.31
CKAP5-212ENST00000533413 C1orf167Q5SNV9 1468 aa6.85□□□□□ -1.31
CKAP5-212ENST00000533413 TESPA1A2RU30 521 aaPredicted RBP6.85□□□□□ -1.31
CKAP5-212ENST00000533413 GIMAP6Q6P9H5 292 aa6.85□□□□□ -1.31
CKAP5-212ENST00000533413 SLAIN2Q9P270 581 aa6.85□□□□□ -1.31
CKAP5-212ENST00000533413 PLIN1O60240 522 aa6.85□□□□□ -1.31
CKAP5-212ENST00000533413 USP32Q8NFA0 1604 aa6.84□□□□□ -1.31
CKAP5-212ENST00000533413 COL22A1Q8NFW1 1626 aaPredicted RBP6.84□□□□□ -1.31
CKAP5-212ENST00000533413 PLCD3Q8N3E9 789 aa6.84□□□□□ -1.31
CKAP5-212ENST00000533413 CDCA7LQ96GN5 454 aa6.84□□□□□ -1.31
CKAP5-212ENST00000533413 CRBNQ96SW2 442 aa6.84□□□□□ -1.31
CKAP5-212ENST00000533413 KIAA1522Q9P206 1035 aaPredicted RBP6.84□□□□□ -1.31
CKAP5-212ENST00000533413 SBNO2Q9Y2G9 1366 aa6.84□□□□□ -1.31
CKAP5-212ENST00000533413 GTPBP6O43824 516 aaPredicted RBP6.84□□□□□ -1.31
CKAP5-212ENST00000533413 TMEM132EQ6IEE7 984 aa6.83□□□□□ -1.32
CKAP5-212ENST00000533413 POGKQ9P215 609 aa6.83□□□□□ -1.32
CKAP5-212ENST00000533413 RPS6KL1Q9Y6S9 549 aa6.83□□□□□ -1.32
CKAP5-212ENST00000533413 RGPD8O14715 1765 aaPredicted RBP6.83□□□□□ -1.32
CKAP5-212ENST00000533413 PHF14O94880 888 aa6.83□□□□□ -1.32
CKAP5-212ENST00000533413 HSP90AA2PQ14568 343 aaPredicted RBP6.82□□□□□ -1.32
CKAP5-212ENST00000533413 CC2D1BQ5T0F9 858 aaKnown RBP6.82□□□□□ -1.32
CKAP5-212ENST00000533413 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.82□□□□□ -1.32
CKAP5-212ENST00000533413 PRAM1Q96QH2 718 aa6.82□□□□□ -1.32
CKAP5-212ENST00000533413 STK26Q9P289 416 aa6.82□□□□□ -1.32
CKAP5-212ENST00000533413 ZC3H4Q9UPT8 1303 aaKnown RBP6.82□□□□□ -1.32
CKAP5-212ENST00000533413 PIP4K2BP78356 416 aa6.82□□□□□ -1.32
CKAP5-212ENST00000533413 PNMA2Q9UL42 364 aa6.82□□□□□ -1.32
CKAP5-212ENST00000533413 PLEKHH1Q9ULM0 1364 aa6.82□□□□□ -1.32
CKAP5-212ENST00000533413 KAT6BQ8WYB5 2073 aa6.82□□□□□ -1.32
CKAP5-212ENST00000533413 RINLQ6ZS11 566 aa6.82□□□□□ -1.32
CKAP5-212ENST00000533413 KLHL42Q9P2K6 505 aa6.82□□□□□ -1.32
CKAP5-212ENST00000533413 ARIH1Q9Y4X5 557 aaPredicted RBP6.82□□□□□ -1.32
CKAP5-212ENST00000533413 ONECUT3O60422 494 aaPredicted RBP6.81□□□□□ -1.32
CKAP5-212ENST00000533413 CACNB1Q02641 598 aaPredicted RBP6.81□□□□□ -1.32
CKAP5-212ENST00000533413 NFKBIBQ15653 356 aa6.81□□□□□ -1.32
CKAP5-212ENST00000533413 CENPQQ7L2Z9 268 aaPredicted RBP6.81□□□□□ -1.32
CKAP5-212ENST00000533413 TRPM3Q9HCF6 1732 aaPredicted RBP6.81□□□□□ -1.32
CKAP5-212ENST00000533413 MARF1Q9Y4F3 1742 aaKnown RBP6.81□□□□□ -1.32
CKAP5-212ENST00000533413 PARD3Q8TEW0 1356 aa6.81□□□□□ -1.32
CKAP5-212ENST00000533413 JCADQ9P266 1359 aa6.81□□□□□ -1.32
CKAP5-212ENST00000533413 PAX3P23760 479 aa6.81□□□□□ -1.32
CKAP5-212ENST00000533413 TRAK1Q9UPV9 953 aa6.81□□□□□ -1.32
CKAP5-212ENST00000533413 PXDNQ92626 1479 aa6.81□□□□□ -1.32
CKAP5-212ENST00000533413 AKAP12Q02952 1782 aa6.81□□□□□ -1.32
CKAP5-212ENST00000533413 WDR43Q15061 677 aaKnown RBP eCLIP6.8□□□□□ -1.32
CKAP5-212ENST00000533413 BRINP3Q76B58 766 aa6.8□□□□□ -1.32
CKAP5-212ENST00000533413 WAPLQ7Z5K2 1190 aa6.8□□□□□ -1.32
CKAP5-212ENST00000533413 MED1Q15648 1581 aaPredicted RBP6.8□□□□□ -1.32
CKAP5-212ENST00000533413 ATP7BP35670 1465 aa6.8□□□□□ -1.32
CKAP5-212ENST00000533413 WASLO00401 505 aaPredicted RBP6.8□□□□□ -1.32
CKAP5-212ENST00000533413 CLGNO14967 610 aa6.8□□□□□ -1.32
CKAP5-212ENST00000533413 PPFIA4O75335 1185 aa6.8□□□□□ -1.32
CKAP5-212ENST00000533413 ZMYND10O75800 440 aa6.8□□□□□ -1.32
CKAP5-212ENST00000533413 SLC4A3P48751 1232 aa6.8□□□□□ -1.32
CKAP5-212ENST00000533413 FAM161AQ3B820 660 aa6.8□□□□□ -1.32
CKAP5-212ENST00000533413 RRAGDQ9NQL2 400 aaPredicted RBP6.8□□□□□ -1.32
CKAP5-212ENST00000533413 NPHP3Q7Z494 1330 aa6.8□□□□□ -1.32
CKAP5-212ENST00000533413 SPDYE4A6NLX3 237 aa6.8□□□□□ -1.32
CKAP5-212ENST00000533413 HSPA1LP34931 641 aa6.8□□□□□ -1.32
CKAP5-212ENST00000533413 TMF1P82094 1093 aa6.8□□□□□ -1.32
CKAP5-212ENST00000533413 FRAT1Q92837 279 aaPredicted RBP6.8□□□□□ -1.32
CKAP5-212ENST00000533413 PANK3Q9H999 370 aa6.8□□□□□ -1.32
CKAP5-212ENST00000533413 SPATA31A6Q5VVP1 1343 aa6.79□□□□□ -1.32
CKAP5-212ENST00000533413 ALS2Q96Q42 1657 aa6.79□□□□□ -1.32
CKAP5-212ENST00000533413 SEMA3EO15041 775 aa6.79□□□□□ -1.32
CKAP5-212ENST00000533413 SKAP1Q86WV1 359 aa6.79□□□□□ -1.32
CKAP5-212ENST00000533413 ZNF622Q969S3 477 aaKnown RBP eCLIP6.79□□□□□ -1.328e-9■■□□□ 12.1
CKAP5-212ENST00000533413 POM121Q96HA1 1249 aa6.79□□□□□ -1.32
CKAP5-212ENST00000533413 ABCA3Q99758 1704 aa6.79□□□□□ -1.32
CKAP5-212ENST00000533413 POLD1P28340 1107 aa6.79□□□□□ -1.32
CKAP5-212ENST00000533413 RBM33Q96EV2 1170 aaKnown RBP6.79□□□□□ -1.32
CKAP5-212ENST00000533413 EVC2Q86UK5 1308 aa6.79□□□□□ -1.32
CKAP5-212ENST00000533413 SBNO1A3KN83 1393 aa6.79□□□□□ -1.32
CKAP5-212ENST00000533413 NINLQ9Y2I6 1382 aa6.79□□□□□ -1.32
CKAP5-212ENST00000533413 USP54Q70EL1 1684 aa6.79□□□□□ -1.32
CKAP5-212ENST00000533413 PER1O15534 1290 aaPredicted RBP6.78□□□□□ -1.32
CKAP5-212ENST00000533413 KIF4AO95239 1232 aa6.78□□□□□ -1.32
CKAP5-212ENST00000533413 CLCN1P35523 988 aa6.78□□□□□ -1.32
CKAP5-212ENST00000533413 NBPF1Q3BBV0 1214 aa6.78□□□□□ -1.32
CKAP5-212ENST00000533413 MPNDQ8N594 471 aa6.78□□□□□ -1.32
CKAP5-212ENST00000533413 CCDC97Q96F63 343 aaPredicted RBP6.78□□□□□ -1.32
CKAP5-212ENST00000533413 SOS2Q07890 1332 aaPredicted RBP6.78□□□□□ -1.32
CKAP5-212ENST00000533413 INSRP06213 1382 aa6.78□□□□□ -1.32
CKAP5-212ENST00000533413 MON2Q7Z3U7 1717 aa6.78□□□□□ -1.32
CKAP5-212ENST00000533413 PSME1Q06323 249 aa6.78□□□□□ -1.32
CKAP5-212ENST00000533413 ARMCX6Q7L4S7 300 aa6.78□□□□□ -1.32
CKAP5-212ENST00000533413 LRRC59Q96AG4 307 aaKnown RBP6.78□□□□□ -1.32
CKAP5-212ENST00000533413 ATAD2Q6PL18 1390 aa6.78□□□□□ -1.32
CKAP5-212ENST00000533413 CRYBG1Q9Y4K1 1723 aa6.78□□□□□ -1.32
CKAP5-212ENST00000533413 MYCNP04198 464 aaPredicted RBP6.78□□□□□ -1.32
CKAP5-212ENST00000533413 RGS3P49796 1198 aa6.78□□□□□ -1.32
CKAP5-212ENST00000533413 GPATCH3Q96I76 525 aa6.78□□□□□ -1.32
CKAP5-212ENST00000533413 POLR3AO14802 1390 aaPredicted RBP6.77□□□□□ -1.32
CKAP5-212ENST00000533413 GOLGA2Q08379 1002 aa6.77□□□□□ -1.33
CKAP5-212ENST00000533413 C20orf194Q5TEA3 1177 aa6.77□□□□□ -1.33
CKAP5-212ENST00000533413 ADAMTS8Q9UP79 889 aa6.77□□□□□ -1.33
CKAP5-212ENST00000533413 SH3BP1Q9Y3L3 701 aa6.77□□□□□ -1.33
CKAP5-212ENST00000533413 KNSTRNQ9Y448 316 aa6.77□□□□□ -1.33
CKAP5-212ENST00000533413 ARHGEF10O15013 1369 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms