RNA–Protein interactions for RNA: ENST00000533328.5

SERGEF-223, Transcript of secretion regulating guanine nucleotide exchange factor, human

TSL 5

Gene SERGEF, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SERGEF-223	ENST00000533328	PTF1A	Q7RTS3	328 aa		28.71	■■■□□ 2.19
SERGEF-223	ENST00000533328	NHS	Q6T4R5	1651 aa		28.7	■■■□□ 2.18
SERGEF-223	ENST00000533328	IL13	P35225	146 aa		28.69	■■■□□ 2.18
SERGEF-223	ENST00000533328	EN1	Q05925	392 aa	Predicted RBP	28.69	■■■□□ 2.18
SERGEF-223	ENST00000533328	DDX54	Q8TDD1	881 aa	Known RBP	28.69	■■■□□ 2.18
SERGEF-223	ENST00000533328	BCL11B	Q9C0K0	894 aa	Predicted RBP	28.68	■■■□□ 2.18
SERGEF-223	ENST00000533328	APBA3	O96018	575 aa		28.67	■■■□□ 2.18
SERGEF-223	ENST00000533328	CAMKK2	Q96RR4	588 aa		28.66	■■■□□ 2.18
SERGEF-223	ENST00000533328	COL3A1	P02461	1466 aa	Predicted RBP	28.66	■■■□□ 2.18
SERGEF-223	ENST00000533328	DDX10	Q13206	875 aa	Known RBP	28.65	■■■□□ 2.18
SERGEF-223	ENST00000533328	KCNQ2	O43526	872 aa		28.64	■■■□□ 2.18
SERGEF-223	ENST00000533328	RGPD3	A6NKT7	1758 aa	Predicted RBP	28.63	■■■□□ 2.17
SERGEF-223	ENST00000533328	RGPD4	Q7Z3J3	1758 aa		28.63	■■■□□ 2.17
SERGEF-223	ENST00000533328	RREB1	Q92766	1687 aa		28.63	■■■□□ 2.17
SERGEF-223	ENST00000533328	KAT6B	Q8WYB5	2073 aa		28.63	■■■□□ 2.17
SERGEF-223	ENST00000533328	EZH2	Q15910	746 aa	Known RBP	28.62	■■■□□ 2.17
SERGEF-223	ENST00000533328	ACSBG1	Q96GR2	724 aa		28.62	■■■□□ 2.17
SERGEF-223	ENST00000533328	DOT1L	Q8TEK3	1739 aa		28.62	■■■□□ 2.17
SERGEF-223	ENST00000533328	PLEKHG2	Q9H7P9	1386 aa		28.62	■■■□□ 2.17
SERGEF-223	ENST00000533328	CYP27B1	O15528	508 aa		28.61	■■■□□ 2.17
SERGEF-223	ENST00000533328	PPP2R1A	P30153	589 aa		28.61	■■■□□ 2.17
SERGEF-223	ENST00000533328	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	28.61	■■■□□ 2.17	1e-6	■■□□□ 12.5
SERGEF-223	ENST00000533328	KDR	P35968	1356 aa		28.61	■■■□□ 2.17
SERGEF-223	ENST00000533328	BTAF1	O14981	1849 aa		28.6	■■■□□ 2.17
SERGEF-223	ENST00000533328	AEBP1	Q8IUX7	1158 aa		28.6	■■■□□ 2.17
SERGEF-223	ENST00000533328	PCDH11X	Q9BZA7	1347 aa		28.6	■■■□□ 2.17
SERGEF-223	ENST00000533328	PCDH11Y	Q9BZA8	1340 aa		28.6	■■■□□ 2.17
SERGEF-223	ENST00000533328	PARD3	Q8TEW0	1356 aa		28.6	■■■□□ 2.17
SERGEF-223	ENST00000533328	PLSCR1	O15162	318 aa		28.59	■■■□□ 2.17
SERGEF-223	ENST00000533328	DIAPH1	O60610	1272 aa	Known RBP	28.58	■■■□□ 2.17
SERGEF-223	ENST00000533328	SULT6B1	Q6IMI4	303 aa		28.57	■■■□□ 2.16
SERGEF-223	ENST00000533328	NUP188	Q5SRE5	1749 aa		28.56	■■■□□ 2.16
SERGEF-223	ENST00000533328	SPG7	Q9UQ90	795 aa		28.56	■■■□□ 2.16
SERGEF-223	ENST00000533328	TOGARAM1	Q9Y4F4	1720 aa		28.55	■■■□□ 2.16
SERGEF-223	ENST00000533328	NKX1-1	Q15270	411 aa	Predicted RBP	28.54	■■■□□ 2.16
SERGEF-223	ENST00000533328	PRIM1	P49642	420 aa	Known RBP	28.53	■■■□□ 2.16
SERGEF-223	ENST00000533328	PROM2	Q8N271	834 aa		28.52	■■■□□ 2.16
SERGEF-223	ENST00000533328	ITGB4	P16144	1822 aa		28.52	■■■□□ 2.16
SERGEF-223	ENST00000533328	PHKG2	P15735	406 aa		28.5	■■■□□ 2.15
SERGEF-223	ENST00000533328	IFNL2	Q8IZJ0	200 aa		28.49	■■■□□ 2.15
SERGEF-223	ENST00000533328	HMOX1	P09601	288 aa		28.48	■■■□□ 2.15
SERGEF-223	ENST00000533328	PLEKHO1	Q53GL0	409 aa	Predicted RBP	28.48	■■■□□ 2.15
SERGEF-223	ENST00000533328	AMOT	Q4VCS5	1084 aa		28.47	■■■□□ 2.15
SERGEF-223	ENST00000533328	CFAP53	Q96M91	514 aa		28.47	■■■□□ 2.15
SERGEF-223	ENST00000533328	ZNF316	A6NFI3	1004 aa	Predicted RBP	28.46	■■■□□ 2.15
SERGEF-223	ENST00000533328	RALBP1	Q15311	655 aa		28.45	■■■□□ 2.14
SERGEF-223	ENST00000533328	SYTL4	Q96C24	671 aa	Predicted RBP	28.45	■■■□□ 2.14
SERGEF-223	ENST00000533328	LY75	O60449	1722 aa		28.44	■■■□□ 2.14
SERGEF-223	ENST00000533328	TXNRD1	Q16881	649 aa		28.44	■■■□□ 2.14
SERGEF-223	ENST00000533328	U2SURP	O15042	1029 aa	Known RBP	28.43	■■■□□ 2.14
SERGEF-223	ENST00000533328	ZNF530	Q6P9A1	599 aa	Predicted RBP	28.41	■■■□□ 2.14
SERGEF-223	ENST00000533328	KDM6A	O15550	1401 aa	Predicted RBP	28.38	■■■□□ 2.13
SERGEF-223	ENST00000533328	MPRIP	Q6WCQ1	1025 aa		28.38	■■■□□ 2.13
SERGEF-223	ENST00000533328	PAPPA	Q13219	1627 aa		28.37	■■■□□ 2.13
SERGEF-223	ENST00000533328	PIGB	Q92521	554 aa		28.37	■■■□□ 2.13
SERGEF-223	ENST00000533328	NUDC	Q9Y266	331 aa		28.37	■■■□□ 2.13
SERGEF-223	ENST00000533328	SCN11A	Q9UI33	1791 aa		28.37	■■■□□ 2.13
SERGEF-223	ENST00000533328	VIRMA	Q69YN4	1812 aa	Known RBP	28.36	■■■□□ 2.13
SERGEF-223	ENST00000533328	PSD	A5PKW4	1024 aa	Predicted RBP	28.36	■■■□□ 2.13
SERGEF-223	ENST00000533328	HSP90AB1	P08238	724 aa	Known RBP	28.36	■■■□□ 2.13
SERGEF-223	ENST00000533328	DCAF5	Q96JK2	942 aa		28.36	■■■□□ 2.13
SERGEF-223	ENST00000533328	RSPH6A	Q9H0K4	717 aa		28.36	■■■□□ 2.13
SERGEF-223	ENST00000533328	LRRC4B	Q9NT99	713 aa		28.36	■■■□□ 2.13
SERGEF-223	ENST00000533328	R3HDM1	Q15032	1099 aa	Known RBP	28.35	■■■□□ 2.13
SERGEF-223	ENST00000533328	MTHFSD	Q2M296	383 aa	Known RBP	28.35	■■■□□ 2.13
SERGEF-223	ENST00000533328	ANO8	Q9HCE9	1232 aa	Predicted RBP	28.35	■■■□□ 2.13
SERGEF-223	ENST00000533328	NBPF14	Q5TI25	921 aa		28.34	■■■□□ 2.13
SERGEF-223	ENST00000533328	PRKRIP1	Q9H875	184 aa	Predicted RBP	28.34	■■■□□ 2.13
SERGEF-223	ENST00000533328	ADAMTS7	Q9UKP4	1686 aa		28.33	■■■□□ 2.13
SERGEF-223	ENST00000533328	ERVV-2	B6SEH9	535 aa		28.33	■■■□□ 2.13
SERGEF-223	ENST00000533328	AKAP4	Q5JQC9	854 aa		28.33	■■■□□ 2.13
SERGEF-223	ENST00000533328	C1orf141	Q5JVX7	400 aa		28.33	■■■□□ 2.13
SERGEF-223	ENST00000533328	MYBBP1A	Q9BQG0	1328 aa	Known RBP	28.33	■■■□□ 2.13
SERGEF-223	ENST00000533328	U2AF1L5	P0DN76	240 aa	Predicted RBP	28.32	■■■□□ 2.12
SERGEF-223	ENST00000533328	U2AF1	Q01081	240 aa	Known RBP eCLIP	28.32	■■■□□ 2.12
SERGEF-223	ENST00000533328	SLC27A3	Q5K4L6	730 aa		28.31	■■■□□ 2.12
SERGEF-223	ENST00000533328	PRKAR2B	P31323	418 aa		28.3	■■■□□ 2.12
SERGEF-223	ENST00000533328	PHACTR3	Q96KR7	559 aa		28.3	■■■□□ 2.12
SERGEF-223	ENST00000533328	TMOD3	Q9NYL9	352 aa		28.3	■■■□□ 2.12
SERGEF-223	ENST00000533328	FCHSD2	O94868	740 aa		28.29	■■■□□ 2.12
SERGEF-223	ENST00000533328	PALLD	Q8WX93	1383 aa		28.28	■■■□□ 2.12
SERGEF-223	ENST00000533328	KCNQ4	P56696	695 aa		28.27	■■■□□ 2.12
SERGEF-223	ENST00000533328	LGR6	Q9HBX8	967 aa		28.27	■■■□□ 2.12
SERGEF-223	ENST00000533328	TAF1L	Q8IZX4	1826 aa		28.27	■■■□□ 2.12
SERGEF-223	ENST00000533328	SMARCC1	Q92922	1105 aa	Predicted RBP	28.26	■■■□□ 2.11
SERGEF-223	ENST00000533328	ASAP1	Q9ULH1	1129 aa		28.26	■■■□□ 2.11
SERGEF-223	ENST00000533328	SLC15A2	Q16348	729 aa		28.25	■■■□□ 2.11
SERGEF-223	ENST00000533328	ATG3	Q9NT62	314 aa		28.25	■■■□□ 2.11
SERGEF-223	ENST00000533328	RNMT	O43148	476 aa	Known RBP	28.24	■■■□□ 2.11
SERGEF-223	ENST00000533328	CABP4	P57796	275 aa		28.24	■■■□□ 2.11
SERGEF-223	ENST00000533328	GAS2L2	Q8NHY3	880 aa		28.24	■■■□□ 2.11
SERGEF-223	ENST00000533328	CCNL1	Q9UK58	526 aa	Predicted RBP	28.24	■■■□□ 2.11
SERGEF-223	ENST00000533328	CASZ1	Q86V15	1759 aa		28.24	■■■□□ 2.11
SERGEF-223	ENST00000533328	C5	P01031	1676 aa		28.23	■■■□□ 2.11
SERGEF-223	ENST00000533328	MRC1	P22897	1456 aa		28.23	■■■□□ 2.11
SERGEF-223	ENST00000533328	AKT1S1	Q96B36	256 aa		28.23	■■■□□ 2.11
SERGEF-223	ENST00000533328	STK32B	Q9NY57	414 aa		28.23	■■■□□ 2.11
SERGEF-223	ENST00000533328	ZNF827	Q17R98	1081 aa		28.22	■■■□□ 2.11
SERGEF-223	ENST00000533328	NFATC2IP	Q8NCF5	419 aa		28.22	■■■□□ 2.11
SERGEF-223	ENST00000533328	QSER1	Q2KHR3	1735 aa		28.21	■■■□□ 2.11

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