RNA–Protein interactions for RNA: ENST00000533214.1

SNX19-211, Transcript of sorting nexin 19, humanhuman

TSL 1 (best) BASIC

Gene SNX19, Length 3,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX19-211ENST00000533214 CHAMP1Q96JM3 812 aa17.52■□□□□ 0.4
SNX19-211ENST00000533214 EID1Q9Y6B2 187 aa17.52■□□□□ 0.4
SNX19-211ENST00000533214 PTPRUQ92729 1446 aa17.52■□□□□ 0.4
SNX19-211ENST00000533214 SLC4A2P04920 1241 aa17.51■□□□□ 0.39
SNX19-211ENST00000533214 DLG5Q8TDM6 1919 aa17.51■□□□□ 0.39
SNX19-211ENST00000533214 FOXD4L5Q5VV16 416 aaPredicted RBP17.51■□□□□ 0.39
SNX19-211ENST00000533214 FOXD4L4Q8WXT5 416 aaPredicted RBP17.51■□□□□ 0.39
SNX19-211ENST00000533214 DLC1Q96QB1 1528 aa17.5■□□□□ 0.39
SNX19-211ENST00000533214 XPCQ01831 940 aaPredicted RBP17.5■□□□□ 0.39
SNX19-211ENST00000533214 MEIS3Q99687 375 aa17.5■□□□□ 0.39
SNX19-211ENST00000533214 SETD1BQ9UPS6 1966 aaKnown RBP17.5■□□□□ 0.39
SNX19-211ENST00000533214 ESPNB1AK53 854 aa17.5■□□□□ 0.39
SNX19-211ENST00000533214 RBM25P49756 843 aaKnown RBP17.5■□□□□ 0.39
SNX19-211ENST00000533214 CALD1Q05682 793 aaKnown RBP17.5■□□□□ 0.39
SNX19-211ENST00000533214 NCBP3Q53F19 620 aaKnown RBP17.5■□□□□ 0.39
SNX19-211ENST00000533214 TSHZ3Q63HK5 1081 aa17.5■□□□□ 0.39
SNX19-211ENST00000533214 KCNA6P17658 529 aa17.49■□□□□ 0.39
SNX19-211ENST00000533214 CDK12Q9NYV4 1490 aaPredicted RBP17.49■□□□□ 0.39
SNX19-211ENST00000533214 CLCN1P35523 988 aa17.49■□□□□ 0.39
SNX19-211ENST00000533214 PKP1Q13835 747 aa17.49■□□□□ 0.39
SNX19-211ENST00000533214 GBP4Q96PP9 640 aa17.49■□□□□ 0.39
SNX19-211ENST00000533214 EYA1Q99502 592 aa17.48■□□□□ 0.39
SNX19-211ENST00000533214 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.48■□□□□ 0.39
SNX19-211ENST00000533214 TSPYL4Q9UJ04 414 aa17.48■□□□□ 0.39
SNX19-211ENST00000533214 KIF13AQ9H1H9 1805 aa17.48■□□□□ 0.39
SNX19-211ENST00000533214 CDC42BPGQ6DT37 1551 aa17.48■□□□□ 0.39
SNX19-211ENST00000533214 LMOD3Q0VAK6 560 aa17.47■□□□□ 0.39
SNX19-211ENST00000533214 BMP2KLQ5H9B9 411 aa17.47■□□□□ 0.39
SNX19-211ENST00000533214 DDX49Q9Y6V7 483 aaKnown RBP17.47■□□□□ 0.39
SNX19-211ENST00000533214 K7ELQ4 463 aaPredicted RBP17.46■□□□□ 0.39
SNX19-211ENST00000533214 DDIT3P35638 169 aa17.46■□□□□ 0.39
SNX19-211ENST00000533214 ABCC4O15439 1325 aa17.46■□□□□ 0.39
SNX19-211ENST00000533214 RIMS1Q86UR5 1692 aaKnown RBP17.46■□□□□ 0.39
SNX19-211ENST00000533214 AATKQ6ZMQ8 1374 aa17.46■□□□□ 0.39
SNX19-211ENST00000533214 RAB3GAP1Q15042 981 aa17.46■□□□□ 0.39
SNX19-211ENST00000533214 RTF1Q92541 710 aaKnown RBP17.46■□□□□ 0.39
SNX19-211ENST00000533214 LMOD2Q6P5Q4 547 aa17.45■□□□□ 0.38
SNX19-211ENST00000533214 ABTB2Q8N961 1025 aa17.45■□□□□ 0.38
SNX19-211ENST00000533214 TPRNQ4KMQ1 711 aa17.45■□□□□ 0.38
SNX19-211ENST00000533214 MCTP1Q6DN14 999 aa17.45■□□□□ 0.38
SNX19-211ENST00000533214 USP6P35125 1406 aa17.45■□□□□ 0.38
SNX19-211ENST00000533214 MSH6P52701 1360 aa17.44■□□□□ 0.38
SNX19-211ENST00000533214 GSPT1P15170 499 aaKnown RBP17.44■□□□□ 0.38
SNX19-211ENST00000533214 CHL1O00533 1208 aa17.44■□□□□ 0.38
SNX19-211ENST00000533214 API5Q9BZZ5 524 aaKnown RBP17.44■□□□□ 0.38
SNX19-211ENST00000533214 PLEKHG3A1L390 1219 aa17.43■□□□□ 0.38
SNX19-211ENST00000533214 SNX21Q969T3 373 aa17.43■□□□□ 0.38
SNX19-211ENST00000533214 FOXD4L6Q3SYB3 417 aaPredicted RBP17.42■□□□□ 0.38
SNX19-211ENST00000533214 CAVIN1Q6NZI2 390 aaKnown RBP17.42■□□□□ 0.38
SNX19-211ENST00000533214 FOXD4L3Q6VB84 417 aaPredicted RBP17.42■□□□□ 0.38
SNX19-211ENST00000533214 NOL8Q76FK4 1167 aaKnown RBP17.42■□□□□ 0.38
SNX19-211ENST00000533214 HSP90AA2PQ14568 343 aaPredicted RBP17.41■□□□□ 0.38
SNX19-211ENST00000533214 UBR1Q8IWV7 1749 aa17.41■□□□□ 0.38
SNX19-211ENST00000533214 ARHGAP45Q92619 1136 aa17.41■□□□□ 0.38
SNX19-211ENST00000533214 EXOC6BQ9Y2D4 811 aa17.41■□□□□ 0.38
SNX19-211ENST00000533214 RGPD8O14715 1765 aaPredicted RBP17.41■□□□□ 0.38
SNX19-211ENST00000533214 PTCH1Q13635 1447 aa17.41■□□□□ 0.38
SNX19-211ENST00000533214 REREQ9P2R6 1566 aa17.4■□□□□ 0.38
SNX19-211ENST00000533214 NASPP49321 788 aaPredicted RBP17.4■□□□□ 0.38
SNX19-211ENST00000533214 VSIG10Q8N0Z9 540 aa17.4■□□□□ 0.38
SNX19-211ENST00000533214 GCC1Q96CN9 775 aa17.4■□□□□ 0.38
SNX19-211ENST00000533214 ARID3AQ99856 593 aa17.4■□□□□ 0.38
SNX19-211ENST00000533214 PEAK1Q9H792 1746 aa17.4■□□□□ 0.38
SNX19-211ENST00000533214 NCOA3Q9Y6Q9 1424 aa17.4■□□□□ 0.38
SNX19-211ENST00000533214 PLEKHM2Q8IWE5 1019 aa17.4■□□□□ 0.38
SNX19-211ENST00000533214 ZGPATQ8N5A5 531 aaKnown RBP17.4■□□□□ 0.38
SNX19-211ENST00000533214 OVOS2A0A0J9YW53 1432 aa17.4■□□□□ 0.38
SNX19-211ENST00000533214 OVOS2Q6IE36 1432 aa17.4■□□□□ 0.38
SNX19-211ENST00000533214 ITSN1Q15811 1721 aa17.4■□□□□ 0.38
SNX19-211ENST00000533214 ANXA1P04083 346 aa17.39■□□□□ 0.38
SNX19-211ENST00000533214 C3P01024 1663 aa17.39■□□□□ 0.38
SNX19-211ENST00000533214 TECPR2O15040 1411 aa17.39■□□□□ 0.37
SNX19-211ENST00000533214 BAG4O95429 457 aaKnown RBP17.39■□□□□ 0.37
SNX19-211ENST00000533214 EIF2S2P20042 333 aaKnown RBP17.39■□□□□ 0.37
SNX19-211ENST00000533214 RBM27Q9P2N5 1060 aaKnown RBP17.39■□□□□ 0.37
SNX19-211ENST00000533214 PLEKHG1Q9ULL1 1385 aa17.39■□□□□ 0.37
SNX19-211ENST00000533214 CDC45O75419 566 aa17.39■□□□□ 0.37
SNX19-211ENST00000533214 CEP85Q6P2H3 762 aa17.39■□□□□ 0.37
SNX19-211ENST00000533214 MON2Q7Z3U7 1717 aa17.38■□□□□ 0.37
SNX19-211ENST00000533214 BRPF1P55201 1214 aaPredicted RBP17.38■□□□□ 0.37
SNX19-211ENST00000533214 FKBP5Q13451 457 aaPredicted RBP17.38■□□□□ 0.37
SNX19-211ENST00000533214 GOLGA6L22H0YM25 854 aa17.37■□□□□ 0.37
SNX19-211ENST00000533214 LRRC59Q96AG4 307 aaKnown RBP17.37■□□□□ 0.37
SNX19-211ENST00000533214 SIRT1Q96EB6 747 aa17.37■□□□□ 0.37
SNX19-211ENST00000533214 CEP170BQ9Y4F5 1589 aaPredicted RBP17.37■□□□□ 0.37
SNX19-211ENST00000533214 PIK3R4Q99570 1358 aa17.36■□□□□ 0.37
SNX19-211ENST00000533214 PRPF40AO75400 957 aaKnown RBP17.35■□□□□ 0.37
SNX19-211ENST00000533214 ESCO1Q5FWF5 840 aa17.35■□□□□ 0.37
SNX19-211ENST00000533214 THEMISQ8N1K5 641 aaPredicted RBP17.35■□□□□ 0.37
SNX19-211ENST00000533214 CIZ1Q9ULV3 898 aaPredicted RBP17.35■□□□□ 0.37
SNX19-211ENST00000533214 KNDC1Q76NI1 1749 aa17.35■□□□□ 0.37
SNX19-211ENST00000533214 HOXC9P31274 260 aa17.35■□□□□ 0.37
SNX19-211ENST00000533214 INTS3Q68E01 1043 aaKnown RBP17.35■□□□□ 0.37
SNX19-211ENST00000533214 MPNDQ8N594 471 aa17.35■□□□□ 0.37
SNX19-211ENST00000533214 IL17REQ8NFR9 667 aa17.35■□□□□ 0.37
SNX19-211ENST00000533214 DCTPP1Q9H773 170 aa17.35■□□□□ 0.37
SNX19-211ENST00000533214 RGS12O14924 1447 aa17.35■□□□□ 0.37
SNX19-211ENST00000533214 AKAP12Q02952 1782 aa17.34■□□□□ 0.37
SNX19-211ENST00000533214 PHAXQ9H814 394 aaKnown RBP17.34■□□□□ 0.37
SNX19-211ENST00000533214 ANKRD44Q8N8A2 993 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms