RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 TSPYL6Q8N831 410 aa11.38□□□□□ -0.59
BDNF-216ENST00000532997 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.38□□□□□ -0.59
BDNF-216ENST00000532997 SHPRHQ149N8 1683 aa11.37□□□□□ -0.59
BDNF-216ENST00000532997 SOX12O15370 315 aa11.37□□□□□ -0.59
BDNF-216ENST00000532997 PPRC1Q5VV67 1664 aaKnown RBP11.37□□□□□ -0.59
BDNF-216ENST00000532997 HTATSF1O43719 755 aaKnown RBP11.37□□□□□ -0.59
BDNF-216ENST00000532997 SASS6Q6UVJ0 657 aa11.37□□□□□ -0.59
BDNF-216ENST00000532997 ZKSCAN5Q9Y2L8 839 aa11.37□□□□□ -0.59
BDNF-216ENST00000532997 ADGRB2O60241 1585 aa11.37□□□□□ -0.59
BDNF-216ENST00000532997 POGZQ7Z3K3 1410 aa11.37□□□□□ -0.59
BDNF-216ENST00000532997 CLEC17AQ6ZS10 378 aa11.37□□□□□ -0.59
BDNF-216ENST00000532997 C8orf58Q8NAV2 365 aa11.37□□□□□ -0.59
BDNF-216ENST00000532997 CCDC61Q9Y6R9 512 aa11.37□□□□□ -0.59
BDNF-216ENST00000532997 RAPGEF3O95398 923 aa11.36□□□□□ -0.59
BDNF-216ENST00000532997 ANAPC15P60006 121 aa11.36□□□□□ -0.59
BDNF-216ENST00000532997 SMC3Q9UQE7 1217 aa11.36□□□□□ -0.59
BDNF-216ENST00000532997 AMPHP49418 695 aa11.36□□□□□ -0.59
BDNF-216ENST00000532997 HSP90AB4PQ58FF6 505 aa11.36□□□□□ -0.59
BDNF-216ENST00000532997 CCDC30Q5VVM6 783 aa11.36□□□□□ -0.59
BDNF-216ENST00000532997 PHACTR3Q96KR7 559 aa11.36□□□□□ -0.59
BDNF-216ENST00000532997 NOL7Q9UMY1 257 aaKnown RBP11.36□□□□□ -0.59
BDNF-216ENST00000532997 SMARCA5O60264 1052 aaPredicted RBP11.36□□□□□ -0.59
BDNF-216ENST00000532997 MLH3Q9UHC1 1453 aa11.36□□□□□ -0.59
BDNF-216ENST00000532997 ABCA9Q8IUA7 1624 aa11.35□□□□□ -0.59
BDNF-216ENST00000532997 DYNC1I1O14576 645 aa11.35□□□□□ -0.59
BDNF-216ENST00000532997 RBM10P98175 930 aaKnown RBP11.35□□□□□ -0.59
BDNF-216ENST00000532997 NME9Q86XW9 330 aa11.35□□□□□ -0.59
BDNF-216ENST00000532997 FOXD4L6Q3SYB3 417 aaPredicted RBP11.35□□□□□ -0.59
BDNF-216ENST00000532997 CEP85Q6P2H3 762 aa11.35□□□□□ -0.59
BDNF-216ENST00000532997 FOXD4L3Q6VB84 417 aaPredicted RBP11.35□□□□□ -0.59
BDNF-216ENST00000532997 LMBRD1Q9NUN5 540 aa11.35□□□□□ -0.59
BDNF-216ENST00000532997 RIMS2Q9UQ26 1411 aa11.35□□□□□ -0.59
BDNF-216ENST00000532997 TULP4Q9NRJ4 1543 aa11.35□□□□□ -0.59
BDNF-216ENST00000532997 WASLO00401 505 aaPredicted RBP11.35□□□□□ -0.59
BDNF-216ENST00000532997 RRS1Q15050 365 aaKnown RBP11.35□□□□□ -0.59
BDNF-216ENST00000532997 UVSSAQ2YD98 709 aa11.35□□□□□ -0.59
BDNF-216ENST00000532997 DRC7Q8IY82 874 aa11.35□□□□□ -0.59
BDNF-216ENST00000532997 NUDT16Q96DE0 195 aaKnown RBP11.35□□□□□ -0.59
BDNF-216ENST00000532997 DIAPH3Q9NSV4 1193 aa11.35□□□□□ -0.59
BDNF-216ENST00000532997 FAM135BQ49AJ0 1406 aa11.34□□□□□ -0.59
BDNF-216ENST00000532997 UBTFL1P0CB47 393 aaPredicted RBP11.34□□□□□ -0.59
BDNF-216ENST00000532997 DDIT3P35638 169 aa11.34□□□□□ -0.59
BDNF-216ENST00000532997 MX1P20591 662 aa11.34□□□□□ -0.59
BDNF-216ENST00000532997 PRIM1P49642 420 aaKnown RBP11.34□□□□□ -0.59
BDNF-216ENST00000532997 XPCQ01831 940 aaPredicted RBP11.34□□□□□ -0.59
BDNF-216ENST00000532997 DCTN1Q14203 1278 aa11.34□□□□□ -0.59
BDNF-216ENST00000532997 PIK3R4Q99570 1358 aa11.34□□□□□ -0.59
BDNF-216ENST00000532997 INTS4Q96HW7 963 aaKnown RBP11.34□□□□□ -0.59
BDNF-216ENST00000532997 TMX3Q96JJ7 454 aa11.34□□□□□ -0.59
BDNF-216ENST00000532997 EDC4Q6P2E9 1401 aaKnown RBP11.34□□□□□ -0.59
BDNF-216ENST00000532997 ADGRB1O14514 1584 aa11.33□□□□□ -0.6
BDNF-216ENST00000532997 CNTROBQ8N137 903 aa11.33□□□□□ -0.6
BDNF-216ENST00000532997 ABCC3O15438 1527 aa11.33□□□□□ -0.6
BDNF-216ENST00000532997 GSPT1P15170 499 aaKnown RBP11.33□□□□□ -0.6
BDNF-216ENST00000532997 IL13P35225 146 aa11.33□□□□□ -0.6
BDNF-216ENST00000532997 MLECQ14165 292 aa11.33□□□□□ -0.6
BDNF-216ENST00000532997 RBM27Q9P2N5 1060 aaKnown RBP11.33□□□□□ -0.6
BDNF-216ENST00000532997 MROH2AA6NES4 1674 aa11.33□□□□□ -0.6
BDNF-216ENST00000532997 PDE1AP54750 535 aa11.33□□□□□ -0.6
BDNF-216ENST00000532997 WAPLQ7Z5K2 1190 aa11.33□□□□□ -0.6
BDNF-216ENST00000532997 ZMYND15Q9H091 742 aa11.33□□□□□ -0.6
BDNF-216ENST00000532997 PPLO60437 1756 aa11.33□□□□□ -0.6
BDNF-216ENST00000532997 PNPLA6Q8IY17 1366 aa11.33□□□□□ -0.6
BDNF-216ENST00000532997 CD2BP2O95400 341 aaKnown RBP11.32□□□□□ -0.6
BDNF-216ENST00000532997 PDIA4P13667 645 aaKnown RBP11.32□□□□□ -0.6
BDNF-216ENST00000532997 ZKSCAN1P17029 563 aaPredicted RBP11.32□□□□□ -0.6
BDNF-216ENST00000532997 RBSNQ9H1K0 784 aa11.32□□□□□ -0.6
BDNF-216ENST00000532997 HECW2Q9P2P5 1572 aa11.32□□□□□ -0.6
BDNF-216ENST00000532997 ZC3H13Q5T200 1668 aaKnown RBP11.32□□□□□ -0.6
BDNF-216ENST00000532997 CCDC183Q5T5S1 534 aa11.32□□□□□ -0.6
BDNF-216ENST00000532997 C16orf71Q8IYS4 520 aaPredicted RBP11.32□□□□□ -0.6
BDNF-216ENST00000532997 OSCARQ8IYS5 282 aa11.32□□□□□ -0.6
BDNF-216ENST00000532997 ARID3AQ99856 593 aa11.32□□□□□ -0.6
BDNF-216ENST00000532997 ATP7BP35670 1465 aa11.32□□□□□ -0.6
BDNF-216ENST00000532997 FAM83GA6ND36 823 aa11.32□□□□□ -0.6
BDNF-216ENST00000532997 ZNF500O60304 480 aaPredicted RBP11.32□□□□□ -0.6
BDNF-216ENST00000532997 AEBP1Q8IUX7 1158 aa11.32□□□□□ -0.6
BDNF-216ENST00000532997 ZRSR1Q15695 479 aaKnown RBP11.31□□□□□ -0.6
BDNF-216ENST00000532997 MEIS3Q99687 375 aa11.31□□□□□ -0.6
BDNF-216ENST00000532997 ESYT1Q9BSJ8 1104 aa11.31□□□□□ -0.6
BDNF-216ENST00000532997 EXOC6BQ9Y2D4 811 aa11.31□□□□□ -0.6
BDNF-216ENST00000532997 ZBTB7CA1YPR0 619 aa11.31□□□□□ -0.6
BDNF-216ENST00000532997 NRDCO43847 1150 aa11.31□□□□□ -0.6
BDNF-216ENST00000532997 ZNF853P0CG23 659 aa11.31□□□□□ -0.6
BDNF-216ENST00000532997 ZGPATQ8N5A5 531 aaKnown RBP11.31□□□□□ -0.6
BDNF-216ENST00000532997 TTC21BQ7Z4L5 1316 aa11.31□□□□□ -0.6
BDNF-216ENST00000532997 NGDNQ8NEJ9 315 aaKnown RBP11.31□□□□□ -0.6
BDNF-216ENST00000532997 KIF2CQ99661 725 aa11.31□□□□□ -0.6
BDNF-216ENST00000532997 PPP6R1Q9UPN7 881 aa11.31□□□□□ -0.6
BDNF-216ENST00000532997 IFT172Q9UG01 1749 aa11.31□□□□□ -0.6
BDNF-216ENST00000532997 MCM10Q7L590 875 aa11.3□□□□□ -0.6
BDNF-216ENST00000532997 C14orf37Q86TY3 774 aa11.3□□□□□ -0.6
BDNF-216ENST00000532997 KIAA0232Q92628 1395 aa11.3□□□□□ -0.6
BDNF-216ENST00000532997 RAB11FIP3O75154 756 aa11.3□□□□□ -0.6
BDNF-216ENST00000532997 LRRC7Q96NW7 1537 aa11.3□□□□□ -0.6
BDNF-216ENST00000532997 TXNDC2Q86VQ3 553 aa11.3□□□□□ -0.6
BDNF-216ENST00000532997 PRIMPOLQ96LW4 560 aa11.3□□□□□ -0.6
BDNF-216ENST00000532997 ERBB4Q15303 1308 aa11.3□□□□□ -0.6
BDNF-216ENST00000532997 SURF6O75683 361 aaKnown RBP11.29□□□□□ -0.6
BDNF-216ENST00000532997 SIRT2Q8IXJ6 389 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms