RNA–Protein interactions for RNA: ENST00000532912.1

TRIM53BP-201, Transcript of tripartite motif containing 53B, pseudogene, humanhuman

BASIC

Gene TRIM53BP, Length 1,720 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53BP-201ENST00000532912 NCOA3Q9Y6Q9 1424 aa10.42□□□□□ -0.74
TRIM53BP-201ENST00000532912 LRRC37A3O60309 1634 aa10.42□□□□□ -0.74
TRIM53BP-201ENST00000532912 MAP3K19Q56UN5 1328 aa10.42□□□□□ -0.74
TRIM53BP-201ENST00000532912 SBNO1A3KN83 1393 aa10.42□□□□□ -0.74
TRIM53BP-201ENST00000532912 FER1L4A9Z1Z3 1794 aa10.42□□□□□ -0.74
TRIM53BP-201ENST00000532912 KRT24Q2M2I5 525 aa10.41□□□□□ -0.74
TRIM53BP-201ENST00000532912 SLKQ9H2G2 1235 aaPredicted RBP10.41□□□□□ -0.74
TRIM53BP-201ENST00000532912 CEP170BQ9Y4F5 1589 aaPredicted RBP10.41□□□□□ -0.74
TRIM53BP-201ENST00000532912 NUTM2FA1L443 756 aa10.41□□□□□ -0.74
TRIM53BP-201ENST00000532912 MCM10Q7L590 875 aa10.41□□□□□ -0.74
TRIM53BP-201ENST00000532912 EID1Q9Y6B2 187 aa10.41□□□□□ -0.74
TRIM53BP-201ENST00000532912 NWD1Q149M9 1564 aa10.41□□□□□ -0.74
TRIM53BP-201ENST00000532912 FLT4P35916 1363 aa10.4□□□□□ -0.74
TRIM53BP-201ENST00000532912 ANKARQ7Z5J8 1434 aa10.4□□□□□ -0.74
TRIM53BP-201ENST00000532912 ANKRD45Q5TZF3 282 aa10.4□□□□□ -0.74
TRIM53BP-201ENST00000532912 IGSF1Q8N6C5 1336 aa10.4□□□□□ -0.74
TRIM53BP-201ENST00000532912 DDIT3P35638 169 aa10.39□□□□□ -0.75
TRIM53BP-201ENST00000532912 KIF2CQ99661 725 aa10.39□□□□□ -0.75
TRIM53BP-201ENST00000532912 DCTPP1Q9H773 170 aa10.39□□□□□ -0.75
TRIM53BP-201ENST00000532912 HAP1P54257 671 aaPredicted RBP10.38□□□□□ -0.75
TRIM53BP-201ENST00000532912 MTHFSDQ2M296 383 aaKnown RBP10.38□□□□□ -0.75
TRIM53BP-201ENST00000532912 SNX21Q969T3 373 aa10.38□□□□□ -0.75
TRIM53BP-201ENST00000532912 PTPRCP08575 1304 aa10.38□□□□□ -0.75
TRIM53BP-201ENST00000532912 TRHP20396 242 aaPredicted RBP10.38□□□□□ -0.75
TRIM53BP-201ENST00000532912 ANKRD44Q8N8A2 993 aa10.38□□□□□ -0.75
TRIM53BP-201ENST00000532912 RTL1A6NKG5 1358 aa10.38□□□□□ -0.75
TRIM53BP-201ENST00000532912 MSH6P52701 1360 aa10.38□□□□□ -0.75
TRIM53BP-201ENST00000532912 FOXO3O43524 673 aa10.37□□□□□ -0.75
TRIM53BP-201ENST00000532912 GSPT1P15170 499 aaKnown RBP10.37□□□□□ -0.75
TRIM53BP-201ENST00000532912 TBC1D9Q6ZT07 1266 aa10.37□□□□□ -0.75
TRIM53BP-201ENST00000532912 PLEKHM2Q8IWE5 1019 aa10.37□□□□□ -0.75
TRIM53BP-201ENST00000532912 EYA1Q99502 592 aa10.37□□□□□ -0.75
TRIM53BP-201ENST00000532912 CEP85Q6P2H3 762 aa10.36□□□□□ -0.75
TRIM53BP-201ENST00000532912 THEMISQ8N1K5 641 aaPredicted RBP10.36□□□□□ -0.75
TRIM53BP-201ENST00000532912 FAM208AQ9UK61 1670 aaKnown RBP10.36□□□□□ -0.75
TRIM53BP-201ENST00000532912 RPAP2Q8IXW5 612 aaPredicted RBP10.36□□□□□ -0.75
TRIM53BP-201ENST00000532912 IL27Q8NEV9 243 aa10.36□□□□□ -0.75
TRIM53BP-201ENST00000532912 NGDNQ8NEJ9 315 aaKnown RBP10.35□□□□□ -0.75
TRIM53BP-201ENST00000532912 CHMP5Q9NZZ3 219 aa10.35□□□□□ -0.75
TRIM53BP-201ENST00000532912 N4BP2Q86UW6 1770 aaPredicted RBP10.34□□□□□ -0.75
TRIM53BP-201ENST00000532912 SOX12O15370 315 aa10.34□□□□□ -0.75
TRIM53BP-201ENST00000532912 HTATSF1O43719 755 aaKnown RBP10.34□□□□□ -0.75
TRIM53BP-201ENST00000532912 KCNA6P17658 529 aa10.34□□□□□ -0.75
TRIM53BP-201ENST00000532912 HSCBQ8IWL3 235 aa10.34□□□□□ -0.75
TRIM53BP-201ENST00000532912 GAS2L2Q8NHY3 880 aa10.34□□□□□ -0.75
TRIM53BP-201ENST00000532912 MEIS3Q99687 375 aa10.34□□□□□ -0.75
TRIM53BP-201ENST00000532912 CDC45O75419 566 aa10.33□□□□□ -0.76
TRIM53BP-201ENST00000532912 HOXC9P31274 260 aa10.33□□□□□ -0.76
TRIM53BP-201ENST00000532912 MCM4P33991 863 aa10.33□□□□□ -0.76
TRIM53BP-201ENST00000532912 TTC22Q5TAA0 569 aa10.33□□□□□ -0.76
TRIM53BP-201ENST00000532912 G2E3Q7L622 706 aa10.33□□□□□ -0.76
TRIM53BP-201ENST00000532912 MIS18AQ9NYP9 233 aa10.33□□□□□ -0.76
TRIM53BP-201ENST00000532912 CHD2O14647 1828 aaKnown RBP10.33□□□□□ -0.76
TRIM53BP-201ENST00000532912 SLC4A2P04920 1241 aa10.33□□□□□ -0.76
TRIM53BP-201ENST00000532912 SPRYD3Q8NCJ5 442 aa10.33□□□□□ -0.76
TRIM53BP-201ENST00000532912 TSPYL4Q9UJ04 414 aa10.33□□□□□ -0.76
TRIM53BP-201ENST00000532912 BRPF3Q9ULD4 1205 aa10.33□□□□□ -0.76
TRIM53BP-201ENST00000532912 CD2BP2O95400 341 aaKnown RBP10.32□□□□□ -0.76
TRIM53BP-201ENST00000532912 AMPHP49418 695 aa10.32□□□□□ -0.76
TRIM53BP-201ENST00000532912 C16orf71Q8IYS4 520 aaPredicted RBP10.32□□□□□ -0.76
TRIM53BP-201ENST00000532912 OTUD7AQ8TE49 926 aaPredicted RBP10.32□□□□□ -0.76
TRIM53BP-201ENST00000532912 RTF1Q92541 710 aaKnown RBP10.32□□□□□ -0.76
TRIM53BP-201ENST00000532912 MED1Q15648 1581 aaPredicted RBP10.32□□□□□ -0.76
TRIM53BP-201ENST00000532912 NFAT5O94916 1531 aa10.31□□□□□ -0.76
TRIM53BP-201ENST00000532912 TUBGCP6Q96RT7 1819 aa10.31□□□□□ -0.76
TRIM53BP-201ENST00000532912 CACNA1FO60840 1977 aa10.31□□□□□ -0.76
TRIM53BP-201ENST00000532912 NLRP6P59044 892 aa10.31□□□□□ -0.76
TRIM53BP-201ENST00000532912 ZNF142P52746 1687 aaPredicted RBP10.31□□□□□ -0.76
TRIM53BP-201ENST00000532912 CCT4P50991 539 aaKnown RBP10.3□□□□□ -0.76
TRIM53BP-201ENST00000532912 CIZ1Q9ULV3 898 aaPredicted RBP10.3□□□□□ -0.76
TRIM53BP-201ENST00000532912 MAP3K5Q99683 1374 aa10.3□□□□□ -0.76
TRIM53BP-201ENST00000532912 LTN1O94822 1766 aa10.3□□□□□ -0.76
TRIM53BP-201ENST00000532912 PHRF1Q9P1Y6 1649 aaKnown RBP10.3□□□□□ -0.76
TRIM53BP-201ENST00000532912 SOS1Q07889 1333 aaPredicted RBP10.3□□□□□ -0.76
TRIM53BP-201ENST00000532912 F6X3S4 739 aa10.3□□□□□ -0.76
TRIM53BP-201ENST00000532912 IL17REQ8NFR9 667 aa10.3□□□□□ -0.76
TRIM53BP-201ENST00000532912 BABAM1Q9NWV8 329 aa10.3□□□□□ -0.76
TRIM53BP-201ENST00000532912 PXDNLA1KZ92 1463 aa10.29□□□□□ -0.76
TRIM53BP-201ENST00000532912 SALL3Q9BXA9 1300 aa10.29□□□□□ -0.76
TRIM53BP-201ENST00000532912 GNAT3A8MTJ3 354 aa10.29□□□□□ -0.76
TRIM53BP-201ENST00000532912 RBM42Q9BTD8 480 aaKnown RBP10.29□□□□□ -0.76
TRIM53BP-201ENST00000532912 OSBPL3Q9H4L5 887 aa10.29□□□□□ -0.76
TRIM53BP-201ENST00000532912 FSD2A1L4K1 749 aa10.28□□□□□ -0.76
TRIM53BP-201ENST00000532912 K7ELQ4 463 aaPredicted RBP10.28□□□□□ -0.76
TRIM53BP-201ENST00000532912 SMARCA5O60264 1052 aaPredicted RBP10.28□□□□□ -0.76
TRIM53BP-201ENST00000532912 RAB3GAP1Q15042 981 aa10.28□□□□□ -0.76
TRIM53BP-201ENST00000532912 USP26Q9BXU7 913 aa10.28□□□□□ -0.76
TRIM53BP-201ENST00000532912 CEMIPQ8WUJ3 1361 aa10.28□□□□□ -0.76
TRIM53BP-201ENST00000532912 EIF5BO60841 1220 aaKnown RBP10.27□□□□□ -0.76
TRIM53BP-201ENST00000532912 SDSP20132 328 aa10.27□□□□□ -0.76
TRIM53BP-201ENST00000532912 FLIIQ13045 1269 aa10.27□□□□□ -0.76
TRIM53BP-201ENST00000532912 ABTB2Q8N961 1025 aa10.27□□□□□ -0.76
TRIM53BP-201ENST00000532912 KDM3BQ7LBC6 1761 aa10.27□□□□□ -0.77
TRIM53BP-201ENST00000532912 HMMRO75330 724 aa10.27□□□□□ -0.77
TRIM53BP-201ENST00000532912 CCDC30Q5VVM6 783 aa10.27□□□□□ -0.77
TRIM53BP-201ENST00000532912 NUTM2GQ5VZR2 741 aa10.27□□□□□ -0.77
TRIM53BP-201ENST00000532912 TNPO1Q92973 898 aaKnown RBP10.27□□□□□ -0.77
TRIM53BP-201ENST00000532912 PHF8Q9UPP1 1060 aa10.27□□□□□ -0.77
TRIM53BP-201ENST00000532912 NCAPD2Q15021 1401 aa10.26□□□□□ -0.77
TRIM53BP-201ENST00000532912 ADGRL3Q9HAR2 1447 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms