RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 SNX21Q969T3 373 aa22.49■■□□□ 1.19
UBXN1-213ENST00000532904 SULT6B1Q6IMI4 303 aa22.48■■□□□ 1.19
UBXN1-213ENST00000532904 DDIT3P35638 169 aa22.48■■□□□ 1.19
UBXN1-213ENST00000532904 CHD1LQ86WJ1 897 aa22.48■■□□□ 1.19
UBXN1-213ENST00000532904 TRAK2O60296 914 aa22.47■■□□□ 1.19
UBXN1-213ENST00000532904 XRCC6P12956 609 aaKnown RBP eCLIP22.47■■□□□ 1.19
UBXN1-213ENST00000532904 KDRP35968 1356 aa22.47■■□□□ 1.19
UBXN1-213ENST00000532904 ABTB2Q8N961 1025 aa22.46■■□□□ 1.19
UBXN1-213ENST00000532904 AMPHP49418 695 aa22.45■■□□□ 1.18
UBXN1-213ENST00000532904 AEBP1Q8IUX7 1158 aa22.45■■□□□ 1.18
UBXN1-213ENST00000532904 LNPKQ9C0E8 428 aa22.45■■□□□ 1.18
UBXN1-213ENST00000532904 RTL1A6NKG5 1358 aa22.45■■□□□ 1.18
UBXN1-213ENST00000532904 BMP2KLQ5H9B9 411 aa22.45■■□□□ 1.18
UBXN1-213ENST00000532904 CFAP44Q96MT7 982 aa22.45■■□□□ 1.18
UBXN1-213ENST00000532904 DDX11L8A8MPP1 907 aa22.44■■□□□ 1.18
UBXN1-213ENST00000532904 RRAGDQ9NQL2 400 aaPredicted RBP22.44■■□□□ 1.18
UBXN1-213ENST00000532904 CHMP4BQ9H444 224 aaKnown RBP22.43■■□□□ 1.18
UBXN1-213ENST00000532904 IGSF1Q8N6C5 1336 aa22.43■■□□□ 1.18
UBXN1-213ENST00000532904 SOX12O15370 315 aa22.43■■□□□ 1.18
UBXN1-213ENST00000532904 ARHGAP45Q92619 1136 aa22.43■■□□□ 1.18
UBXN1-213ENST00000532904 ZBTB7BO15156 539 aaPredicted RBP22.42■■□□□ 1.18
UBXN1-213ENST00000532904 GCC1Q96CN9 775 aa22.42■■□□□ 1.18
UBXN1-213ENST00000532904 KIF1AQ12756 1690 aa22.42■■□□□ 1.18
UBXN1-213ENST00000532904 ESCO1Q5FWF5 840 aa22.42■■□□□ 1.18
UBXN1-213ENST00000532904 GZF1Q9H116 711 aaPredicted RBP22.42■■□□□ 1.18
UBXN1-213ENST00000532904 PHRF1Q9P1Y6 1649 aaKnown RBP22.41■■□□□ 1.18
UBXN1-213ENST00000532904 LTN1O94822 1766 aa22.41■■□□□ 1.18
UBXN1-213ENST00000532904 C14orf37Q86TY3 774 aa22.41■■□□□ 1.18
UBXN1-213ENST00000532904 MRPL50Q8N5N7 158 aaKnown RBP22.41■■□□□ 1.18
UBXN1-213ENST00000532904 RBM33Q96EV2 1170 aaKnown RBP22.41■■□□□ 1.18
UBXN1-213ENST00000532904 CIZ1Q9ULV3 898 aaPredicted RBP22.41■■□□□ 1.18
UBXN1-213ENST00000532904 NFAT5O94916 1531 aa22.4■■□□□ 1.18
UBXN1-213ENST00000532904 HOXC9P31274 260 aa22.4■■□□□ 1.18
UBXN1-213ENST00000532904 PROSER2Q86WR7 435 aaPredicted RBP22.4■■□□□ 1.18
UBXN1-213ENST00000532904 THUMPD2Q9BTF0 503 aaKnown RBP22.4■■□□□ 1.18
UBXN1-213ENST00000532904 VAMP4O75379 141 aa22.4■■□□□ 1.18
UBXN1-213ENST00000532904 PSME1Q06323 249 aa22.4■■□□□ 1.18
UBXN1-213ENST00000532904 MBIPQ9NS73 344 aa22.4■■□□□ 1.18
UBXN1-213ENST00000532904 PRKCSHP14314 528 aaPredicted RBP22.39■■□□□ 1.17
UBXN1-213ENST00000532904 MRE11P49959 708 aa22.38■■□□□ 1.17
UBXN1-213ENST00000532904 EYA1Q99502 592 aa22.38■■□□□ 1.17
UBXN1-213ENST00000532904 C19orf44Q9H6X5 657 aa22.38■■□□□ 1.17
UBXN1-213ENST00000532904 ANKRD45Q5TZF3 282 aa22.37■■□□□ 1.17
UBXN1-213ENST00000532904 ISY1Q9ULR0 285 aaKnown RBP22.37■■□□□ 1.17
UBXN1-213ENST00000532904 KCNH5Q8NCM2 988 aa22.37■■□□□ 1.17
UBXN1-213ENST00000532904 KIF2CQ99661 725 aa22.37■■□□□ 1.17
UBXN1-213ENST00000532904 TRPM3Q9HCF6 1732 aaPredicted RBP22.36■■□□□ 1.17
UBXN1-213ENST00000532904 FAM83GA6ND36 823 aa22.36■■□□□ 1.17
UBXN1-213ENST00000532904 NUTM2GQ5VZR2 741 aa22.36■■□□□ 1.17
UBXN1-213ENST00000532904 PANK2Q9BZ23 570 aa22.36■■□□□ 1.17
UBXN1-213ENST00000532904 DCCP43146 1447 aa22.36■■□□□ 1.17
UBXN1-213ENST00000532904 ARXQ96QS3 562 aa22.35■■□□□ 1.17
UBXN1-213ENST00000532904 C1orf167Q5SNV9 1468 aa22.35■■□□□ 1.17
UBXN1-213ENST00000532904 ABCC4O15439 1325 aa22.35■■□□□ 1.17
UBXN1-213ENST00000532904 HSP90AB1P08238 724 aaKnown RBP22.35■■□□□ 1.17
UBXN1-213ENST00000532904 MST1RQ04912 1400 aa22.34■■□□□ 1.17
UBXN1-213ENST00000532904 SLIT3O75094 1523 aa22.34■■□□□ 1.17
UBXN1-213ENST00000532904 TNPO1Q92973 898 aaKnown RBP22.34■■□□□ 1.17
UBXN1-213ENST00000532904 STRCP1A6NGW2 1772 aa22.34■■□□□ 1.17
UBXN1-213ENST00000532904 CHL1O00533 1208 aa22.34■■□□□ 1.17
UBXN1-213ENST00000532904 RAB3GAP1Q15042 981 aa22.34■■□□□ 1.17
UBXN1-213ENST00000532904 GAS2L2Q8NHY3 880 aa22.34■■□□□ 1.17
UBXN1-213ENST00000532904 HTATSF1O43719 755 aaKnown RBP22.33■■□□□ 1.17
UBXN1-213ENST00000532904 HAP1P54257 671 aaPredicted RBP22.33■■□□□ 1.17
UBXN1-213ENST00000532904 TSPYL6Q8N831 410 aa22.33■■□□□ 1.17
UBXN1-213ENST00000532904 IP6K1Q92551 441 aa22.33■■□□□ 1.17
UBXN1-213ENST00000532904 ORAI2Q96SN7 254 aa22.33■■□□□ 1.17
UBXN1-213ENST00000532904 EIF5BO60841 1220 aaKnown RBP22.32■■□□□ 1.16
UBXN1-213ENST00000532904 SIRT2Q8IXJ6 389 aa22.32■■□□□ 1.16
UBXN1-213ENST00000532904 CRB1P82279 1406 aa22.32■■□□□ 1.16
UBXN1-213ENST00000532904 KIAA0232Q92628 1395 aa22.32■■□□□ 1.16
UBXN1-213ENST00000532904 DCTN1Q14203 1278 aa22.32■■□□□ 1.16
UBXN1-213ENST00000532904 TWISTNBQ3B726 338 aaPredicted RBP22.32■■□□□ 1.16
UBXN1-213ENST00000532904 TBC1D9Q6ZT07 1266 aa22.32■■□□□ 1.16
UBXN1-213ENST00000532904 GBP4Q96PP9 640 aa22.32■■□□□ 1.16
UBXN1-213ENST00000532904 C1orf115Q9H7X2 142 aa22.32■■□□□ 1.16
UBXN1-213ENST00000532904 GRPEL1Q9HAV7 217 aa22.31■■□□□ 1.16
UBXN1-213ENST00000532904 MTHFSDQ2M296 383 aaKnown RBP22.3■■□□□ 1.16
UBXN1-213ENST00000532904 PTMSP20962 102 aa22.3■■□□□ 1.16
UBXN1-213ENST00000532904 LRRC37A3O60309 1634 aa22.3■■□□□ 1.16
UBXN1-213ENST00000532904 K7ELQ4 463 aaPredicted RBP22.29■■□□□ 1.16
UBXN1-213ENST00000532904 C8orf58Q8NAV2 365 aa22.29■■□□□ 1.16
UBXN1-213ENST00000532904 FOXO3O43524 673 aa22.28■■□□□ 1.16
UBXN1-213ENST00000532904 CLCN1P35523 988 aa22.28■■□□□ 1.16
UBXN1-213ENST00000532904 SKOR2Q2VWA4 1001 aaPredicted RBP22.28■■□□□ 1.16
UBXN1-213ENST00000532904 CD2BP2O95400 341 aaKnown RBP22.27■■□□□ 1.16
UBXN1-213ENST00000532904 MCM10Q7L590 875 aa22.27■■□□□ 1.16
UBXN1-213ENST00000532904 RTF1Q92541 710 aaKnown RBP22.27■■□□□ 1.16
UBXN1-213ENST00000532904 API5Q9BZZ5 524 aaKnown RBP22.27■■□□□ 1.16
UBXN1-213ENST00000532904 TMEM94Q12767 1356 aa22.27■■□□□ 1.16
UBXN1-213ENST00000532904 ALS2Q96Q42 1657 aa22.27■■□□□ 1.16
UBXN1-213ENST00000532904 CDC45O75419 566 aa22.26■■□□□ 1.15
UBXN1-213ENST00000532904 KRT28Q7Z3Y7 464 aa22.25■■□□□ 1.15
UBXN1-213ENST00000532904 ELL2O00472 640 aaPredicted RBP22.24■■□□□ 1.15
UBXN1-213ENST00000532904 ATF3P18847 181 aa22.24■■□□□ 1.15
UBXN1-213ENST00000532904 GCP02774 474 aa22.24■■□□□ 1.15
UBXN1-213ENST00000532904 HSP90AA1P07900 732 aaKnown RBP22.24■■□□□ 1.15
UBXN1-213ENST00000532904 ARHGEF25Q86VW2 580 aa22.23■■□□□ 1.15
UBXN1-213ENST00000532904 GNAT3A8MTJ3 354 aa22.22■■□□□ 1.15
UBXN1-213ENST00000532904 CLEC17AQ6ZS10 378 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms