RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.43□□□□□ -0.741e-7■■■□□ 16.3
CTNND1-232ENST00000532649 ABCC10Q5T3U5 1492 aa10.42□□□□□ -0.74
CTNND1-232ENST00000532649 TAF7Q15545 349 aaPredicted RBP10.42□□□□□ -0.74
CTNND1-232ENST00000532649 KDM4AO75164 1064 aa10.42□□□□□ -0.74
CTNND1-232ENST00000532649 ACBD3Q9H3P7 528 aa10.42□□□□□ -0.74
CTNND1-232ENST00000532649 SLC3A2P08195 630 aaKnown RBP10.42□□□□□ -0.74
CTNND1-232ENST00000532649 RIMS2Q9UQ26 1411 aa10.42□□□□□ -0.74
CTNND1-232ENST00000532649 PBRM1Q86U86 1689 aa10.42□□□□□ -0.74
CTNND1-232ENST00000532649 SKOR2Q2VWA4 1001 aaPredicted RBP10.42□□□□□ -0.74
CTNND1-232ENST00000532649 DISP3Q9P2K9 1392 aa10.42□□□□□ -0.74
CTNND1-232ENST00000532649 PTPRKQ15262 1439 aa10.41□□□□□ -0.74
CTNND1-232ENST00000532649 OFD1O75665 1012 aa10.41□□□□□ -0.74
CTNND1-232ENST00000532649 SLFN5Q08AF3 891 aa10.41□□□□□ -0.74
CTNND1-232ENST00000532649 IFT57Q9NWB7 429 aa10.41□□□□□ -0.74
CTNND1-232ENST00000532649 ABCC2Q92887 1545 aa10.41□□□□□ -0.74
CTNND1-232ENST00000532649 EXOC5O00471 708 aa10.41□□□□□ -0.74
CTNND1-232ENST00000532649 MAP4K4O95819 1239 aaPredicted RBP10.41□□□□□ -0.74
CTNND1-232ENST00000532649 AACSQ86V21 672 aa10.41□□□□□ -0.74
CTNND1-232ENST00000532649 CCDC97Q96F63 343 aaPredicted RBP10.41□□□□□ -0.74
CTNND1-232ENST00000532649 HOMER1Q86YM7 354 aa10.41□□□□□ -0.74
CTNND1-232ENST00000532649 CHMP5Q9NZZ3 219 aa10.41□□□□□ -0.74
CTNND1-232ENST00000532649 ZNF652Q9Y2D9 606 aa10.41□□□□□ -0.74
CTNND1-232ENST00000532649 PPM1FP49593 454 aaPredicted RBP10.41□□□□□ -0.74
CTNND1-232ENST00000532649 CHRNA2Q15822 529 aa10.41□□□□□ -0.74
CTNND1-232ENST00000532649 CEP126Q9P2H0 1117 aa10.41□□□□□ -0.74
CTNND1-232ENST00000532649 ZPR1O75312 459 aa10.4□□□□□ -0.74
CTNND1-232ENST00000532649 TTC21BQ7Z4L5 1316 aa10.4□□□□□ -0.74
CTNND1-232ENST00000532649 XBP1P17861 261 aa10.4□□□□□ -0.74
CTNND1-232ENST00000532649 FKBP4Q02790 459 aaKnown RBP eCLIP10.4□□□□□ -0.74
CTNND1-232ENST00000532649 SYCP1Q15431 976 aa10.4□□□□□ -0.74
CTNND1-232ENST00000532649 MAP7D2Q96T17 732 aa10.4□□□□□ -0.74
CTNND1-232ENST00000532649 HMGB2P26583 209 aaKnown RBP10.4□□□□□ -0.74
CTNND1-232ENST00000532649 IGHMBP2P38935 993 aaKnown RBP10.4□□□□□ -0.74
CTNND1-232ENST00000532649 CCDC191Q8NCU4 936 aa10.4□□□□□ -0.74
CTNND1-232ENST00000532649 NSD2O96028 1365 aa10.4□□□□□ -0.74
CTNND1-232ENST00000532649 RBM5P52756 815 aaKnown RBP eCLIP10.39□□□□□ -0.75
CTNND1-232ENST00000532649 ANKRD18AQ8IVF6 992 aa10.39□□□□□ -0.75
CTNND1-232ENST00000532649 NUCB2P80303 420 aa10.39□□□□□ -0.75
CTNND1-232ENST00000532649 STK11IPQ8N1F8 1099 aa10.39□□□□□ -0.75
CTNND1-232ENST00000532649 ANKRD24Q8TF21 1146 aa10.39□□□□□ -0.75
CTNND1-232ENST00000532649 TMEM57Q8N5G2 664 aa10.39□□□□□ -0.75
CTNND1-232ENST00000532649 IL1RAPL2Q9NP60 686 aa10.39□□□□□ -0.75
CTNND1-232ENST00000532649 SPINK5Q9NQ38 1064 aaPredicted RBP10.39□□□□□ -0.75
CTNND1-232ENST00000532649 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.39□□□□□ -0.75
CTNND1-232ENST00000532649 ABCC11Q96J66 1382 aa10.39□□□□□ -0.75
CTNND1-232ENST00000532649 MYD88Q99836 296 aa10.39□□□□□ -0.75
CTNND1-232ENST00000532649 NUP160Q12769 1436 aa10.39□□□□□ -0.75
CTNND1-232ENST00000532649 UBAP1LF5GYI3 381 aa10.38□□□□□ -0.75
CTNND1-232ENST00000532649 NEK4P51957 841 aa10.38□□□□□ -0.75
CTNND1-232ENST00000532649 LARP1Q6PKG0 1096 aaKnown RBP10.38□□□□□ -0.75
CTNND1-232ENST00000532649 NACAP1Q9BZK3 213 aa10.38□□□□□ -0.75
CTNND1-232ENST00000532649 ATP2B2Q01814 1243 aa10.38□□□□□ -0.75
CTNND1-232ENST00000532649 HSPA2P54652 639 aa10.38□□□□□ -0.75
CTNND1-232ENST00000532649 CAGE1Q8TC20 777 aa10.38□□□□□ -0.75
CTNND1-232ENST00000532649 TOM1O60784 492 aa10.38□□□□□ -0.75
CTNND1-232ENST00000532649 NOM1Q5C9Z4 860 aaKnown RBP10.38□□□□□ -0.75
CTNND1-232ENST00000532649 ZSCAN25Q6NSZ9 544 aa10.37□□□□□ -0.75
CTNND1-232ENST00000532649 CHD1LQ86WJ1 897 aa10.37□□□□□ -0.75
CTNND1-232ENST00000532649 IFNL2Q8IZJ0 200 aa10.37□□□□□ -0.75
CTNND1-232ENST00000532649 PPIP5K1Q6PFW1 1433 aa10.37□□□□□ -0.75
CTNND1-232ENST00000532649 NEBLO76041 1014 aa10.37□□□□□ -0.75
CTNND1-232ENST00000532649 CDK5RAP3Q96JB5 506 aa10.37□□□□□ -0.75
CTNND1-232ENST00000532649 RSPH6AQ9H0K4 717 aa10.37□□□□□ -0.75
CTNND1-232ENST00000532649 NPHP3Q7Z494 1330 aa10.37□□□□□ -0.75
CTNND1-232ENST00000532649 ANKRD36BQ8N2N9 1353 aa10.37□□□□□ -0.75
CTNND1-232ENST00000532649 CCDC73Q6ZRK6 1079 aa10.37□□□□□ -0.75
CTNND1-232ENST00000532649 RPAP2Q8IXW5 612 aaPredicted RBP10.37□□□□□ -0.75
CTNND1-232ENST00000532649 FMNL2Q96PY5 1086 aa10.37□□□□□ -0.75
CTNND1-232ENST00000532649 FBLN1P23142 703 aa10.37□□□□□ -0.75
CTNND1-232ENST00000532649 OLFM4Q6UX06 510 aa10.37□□□□□ -0.75
CTNND1-232ENST00000532649 METTL24Q5JXM2 366 aa10.36□□□□□ -0.75
CTNND1-232ENST00000532649 RAI14Q9P0K7 980 aa10.36□□□□□ -0.75
CTNND1-232ENST00000532649 ZMYM3Q14202 1370 aa10.36□□□□□ -0.75
CTNND1-232ENST00000532649 NCKAP5LQ9HCH0 1330 aa10.36□□□□□ -0.75
CTNND1-232ENST00000532649 FANCIQ9NVI1 1328 aa10.36□□□□□ -0.75
CTNND1-232ENST00000532649 SSH1Q8WYL5 1049 aa10.36□□□□□ -0.75
CTNND1-232ENST00000532649 TTC21AQ8NDW8 1320 aa10.36□□□□□ -0.75
CTNND1-232ENST00000532649 EXOC6BQ9Y2D4 811 aa10.35□□□□□ -0.75
CTNND1-232ENST00000532649 CFAP43Q8NDM7 1665 aa10.35□□□□□ -0.75
CTNND1-232ENST00000532649 LRP2BPQ9P2M1 347 aa10.35□□□□□ -0.75
CTNND1-232ENST00000532649 ALDH1L2Q3SY69 923 aa10.35□□□□□ -0.75
CTNND1-232ENST00000532649 SASS6Q6UVJ0 657 aa10.35□□□□□ -0.75
CTNND1-232ENST00000532649 ARGLU1Q9NWB6 273 aaPredicted RBP10.35□□□□□ -0.75
CTNND1-232ENST00000532649 NEFHP12036 1026 aa10.35□□□□□ -0.75
CTNND1-232ENST00000532649 ATP2B1P20020 1258 aa10.35□□□□□ -0.75
CTNND1-232ENST00000532649 DISP1Q96F81 1524 aa10.35□□□□□ -0.75
CTNND1-232ENST00000532649 F6X3S4 739 aa10.35□□□□□ -0.75
CTNND1-232ENST00000532649 TCOF1Q13428 1488 aaKnown RBP10.34□□□□□ -0.75
CTNND1-232ENST00000532649 ANKRD62A6NC57 917 aa10.34□□□□□ -0.75
CTNND1-232ENST00000532649 KRT18P05783 430 aaKnown RBP10.34□□□□□ -0.75
CTNND1-232ENST00000532649 IDH1O75874 414 aaKnown RBP10.34□□□□□ -0.75
CTNND1-232ENST00000532649 NUTM1Q86Y26 1132 aa10.34□□□□□ -0.75
CTNND1-232ENST00000532649 ZSCAN29Q8IWY8 852 aaPredicted RBP10.34□□□□□ -0.75
CTNND1-232ENST00000532649 HYPKQ9NX55 129 aa10.34□□□□□ -0.75
CTNND1-232ENST00000532649 DBF4Q9UBU7 674 aaPredicted RBP10.34□□□□□ -0.75
CTNND1-232ENST00000532649 TRMT112Q9UI30 125 aaKnown RBP10.34□□□□□ -0.75
CTNND1-232ENST00000532649 RABEP1Q15276 862 aa10.34□□□□□ -0.75
CTNND1-232ENST00000532649 MPHOSPH10O00566 681 aaKnown RBP10.34□□□□□ -0.75
CTNND1-232ENST00000532649 DESP17661 470 aa10.34□□□□□ -0.75
CTNND1-232ENST00000532649 RARSP54136 660 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms