RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 RIMS2Q9UQ26 1411 aa18.34■□□□□ 0.53
PCDHA3-202ENST00000532566 ADGBQ8N7X0 1667 aa18.34■□□□□ 0.53
PCDHA3-202ENST00000532566 FLIIQ13045 1269 aa18.34■□□□□ 0.53
PCDHA3-202ENST00000532566 POLKQ9UBT6 870 aa18.34■□□□□ 0.53
PCDHA3-202ENST00000532566 TBC1D2BQ9UPU7 963 aa18.34■□□□□ 0.53
PCDHA3-202ENST00000532566 FOXO3O43524 673 aa18.33■□□□□ 0.53
PCDHA3-202ENST00000532566 RAB11FIP3O75154 756 aa18.33■□□□□ 0.53
PCDHA3-202ENST00000532566 ATP7AQ04656 1500 aa18.33■□□□□ 0.53
PCDHA3-202ENST00000532566 TPD52L1Q16890 204 aaPredicted RBP18.33■□□□□ 0.53
PCDHA3-202ENST00000532566 SAFBQ15424 915 aaKnown RBP eCLIP18.33■□□□□ 0.53
PCDHA3-202ENST00000532566 CWC27Q6UX04 472 aaKnown RBP18.33■□□□□ 0.53
PCDHA3-202ENST00000532566 NUTM1Q86Y26 1132 aa18.33■□□□□ 0.53
PCDHA3-202ENST00000532566 HSP90AA2PQ14568 343 aaPredicted RBP18.33■□□□□ 0.52
PCDHA3-202ENST00000532566 ANKRD1Q15327 319 aa18.33■□□□□ 0.52
PCDHA3-202ENST00000532566 PPIP5K1Q6PFW1 1433 aa18.32■□□□□ 0.52
PCDHA3-202ENST00000532566 LETM1O95202 739 aaPredicted RBP18.32■□□□□ 0.52
PCDHA3-202ENST00000532566 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.32■□□□□ 0.52
PCDHA3-202ENST00000532566 MARCH6O60337 910 aa18.32■□□□□ 0.52
PCDHA3-202ENST00000532566 GLRX3O76003 335 aaKnown RBP18.32■□□□□ 0.52
PCDHA3-202ENST00000532566 CCDC158Q5M9N0 1113 aa18.32■□□□□ 0.52
PCDHA3-202ENST00000532566 HSP90AB2PQ58FF8 381 aa18.32■□□□□ 0.52
PCDHA3-202ENST00000532566 TBC1D32Q96NH3 1257 aa18.32■□□□□ 0.52
PCDHA3-202ENST00000532566 AEBP1Q8IUX7 1158 aa18.31■□□□□ 0.52
PCDHA3-202ENST00000532566 ARHGEF5Q12774 1597 aa18.31■□□□□ 0.52
PCDHA3-202ENST00000532566 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.31■□□□□ 0.52
PCDHA3-202ENST00000532566 HOOK1Q9UJC3 728 aaKnown RBP18.31■□□□□ 0.52
PCDHA3-202ENST00000532566 A0A1W2PP64 1363 aa18.31■□□□□ 0.52
PCDHA3-202ENST00000532566 BLOC1S2Q6QNY1 142 aa18.31■□□□□ 0.52
PCDHA3-202ENST00000532566 DNAAF4Q8WXU2 420 aa18.3■□□□□ 0.52
PCDHA3-202ENST00000532566 LRRFIP2Q9Y608 721 aaKnown RBP18.3■□□□□ 0.52
PCDHA3-202ENST00000532566 TTC21AQ8NDW8 1320 aa18.3■□□□□ 0.52
PCDHA3-202ENST00000532566 MBD5Q9P267 1494 aa18.3■□□□□ 0.52
PCDHA3-202ENST00000532566 SDF4Q9BRK5 362 aa18.3■□□□□ 0.52
PCDHA3-202ENST00000532566 TSPY26PQ9H489 355 aa18.3■□□□□ 0.52
PCDHA3-202ENST00000532566 LARP1Q6PKG0 1096 aaKnown RBP18.29■□□□□ 0.52
PCDHA3-202ENST00000532566 GRPEL1Q9HAV7 217 aa18.29■□□□□ 0.52
PCDHA3-202ENST00000532566 CCDC39Q9UFE4 941 aa18.29■□□□□ 0.52
PCDHA3-202ENST00000532566 TPM3P06753 285 aa18.29■□□□□ 0.52
PCDHA3-202ENST00000532566 MPRIPQ6WCQ1 1025 aa18.29■□□□□ 0.52
PCDHA3-202ENST00000532566 RBM33Q96EV2 1170 aaKnown RBP18.29■□□□□ 0.52
PCDHA3-202ENST00000532566 CNNM1Q9NRU3 951 aa18.29■□□□□ 0.52
PCDHA3-202ENST00000532566 DBF4Q9UBU7 674 aaPredicted RBP18.29■□□□□ 0.52
PCDHA3-202ENST00000532566 PES1O00541 588 aaKnown RBP18.29■□□□□ 0.52
PCDHA3-202ENST00000532566 JAKMIP1Q96N16 626 aaKnown RBP18.29■□□□□ 0.52
PCDHA3-202ENST00000532566 FAM177BA6PVY3 158 aa18.28■□□□□ 0.52
PCDHA3-202ENST00000532566 CCDC173Q0VFZ6 552 aa18.28■□□□□ 0.52
PCDHA3-202ENST00000532566 CCDC57Q2TAC2 916 aa18.28■□□□□ 0.52
PCDHA3-202ENST00000532566 TTC39AQ5SRH9 613 aa18.28■□□□□ 0.52
PCDHA3-202ENST00000532566 TBC1D9Q6ZT07 1266 aa18.28■□□□□ 0.52
PCDHA3-202ENST00000532566 KDM6BO15054 1643 aa18.28■□□□□ 0.52
PCDHA3-202ENST00000532566 SPINK5Q9NQ38 1064 aaPredicted RBP18.28■□□□□ 0.52
PCDHA3-202ENST00000532566 DHX16O60231 1041 aaKnown RBP18.28■□□□□ 0.52
PCDHA3-202ENST00000532566 NUCB1Q02818 461 aa18.28■□□□□ 0.52
PCDHA3-202ENST00000532566 IL27Q8NEV9 243 aa18.28■□□□□ 0.52
PCDHA3-202ENST00000532566 ZSCAN31Q96LW9 406 aaPredicted RBP18.28■□□□□ 0.52
PCDHA3-202ENST00000532566 RLBP1P12271 317 aa18.27■□□□□ 0.52
PCDHA3-202ENST00000532566 UPF3BQ9BZI7 483 aaKnown RBP18.27■□□□□ 0.52
PCDHA3-202ENST00000532566 CEP126Q9P2H0 1117 aa18.27■□□□□ 0.52
PCDHA3-202ENST00000532566 CLSTN1O94985 981 aa18.27■□□□□ 0.52
PCDHA3-202ENST00000532566 TPM1P09493 284 aa18.27■□□□□ 0.51
PCDHA3-202ENST00000532566 PDRG1Q9NUG6 133 aa18.27■□□□□ 0.51
PCDHA3-202ENST00000532566 INSRP06213 1382 aa18.27■□□□□ 0.51
PCDHA3-202ENST00000532566 YTHDC2Q9H6S0 1430 aaKnown RBP18.26■□□□□ 0.51
PCDHA3-202ENST00000532566 LARP1BQ659C4 914 aaKnown RBP18.26■□□□□ 0.51
PCDHA3-202ENST00000532566 TNNQ9UQP3 1299 aa18.26■□□□□ 0.51
PCDHA3-202ENST00000532566 ZFYVE9O95405 1425 aa18.26■□□□□ 0.51
PCDHA3-202ENST00000532566 SART3Q15020 963 aaKnown RBP18.26■□□□□ 0.51
PCDHA3-202ENST00000532566 ZRANB1Q9UGI0 708 aa18.26■□□□□ 0.51
PCDHA3-202ENST00000532566 NPATQ14207 1427 aa18.26■□□□□ 0.51
PCDHA3-202ENST00000532566 KINO60870 393 aaKnown RBP18.25■□□□□ 0.51
PCDHA3-202ENST00000532566 KRT85P78386 507 aa18.25■□□□□ 0.51
PCDHA3-202ENST00000532566 C8orf34Q49A92 452 aa18.25■□□□□ 0.51
PCDHA3-202ENST00000532566 C8orf58Q8NAV2 365 aa18.25■□□□□ 0.51
PCDHA3-202ENST00000532566 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.25■□□□□ 0.51
PCDHA3-202ENST00000532566 ABCC1P33527 1531 aa18.25■□□□□ 0.51
PCDHA3-202ENST00000532566 STK3Q13188 491 aa18.25■□□□□ 0.51
PCDHA3-202ENST00000532566 EIF4A2Q14240 407 aaKnown RBP18.25■□□□□ 0.51
PCDHA3-202ENST00000532566 FBXW7Q969H0 707 aa18.25■□□□□ 0.51
PCDHA3-202ENST00000532566 ABCA8O94911 1581 aa18.25■□□□□ 0.51
PCDHA3-202ENST00000532566 RNF123Q5XPI4 1314 aa18.25■□□□□ 0.51
PCDHA3-202ENST00000532566 KRT32Q14532 448 aa18.25■□□□□ 0.51
PCDHA3-202ENST00000532566 TSR1Q2NL82 804 aaKnown RBP18.25■□□□□ 0.51
PCDHA3-202ENST00000532566 MRPL50Q8N5N7 158 aaKnown RBP18.25■□□□□ 0.51
PCDHA3-202ENST00000532566 ZNF592Q92610 1267 aa18.24■□□□□ 0.51
PCDHA3-202ENST00000532566 NAT10Q9H0A0 1025 aaKnown RBP18.24■□□□□ 0.51
PCDHA3-202ENST00000532566 PIK3R4Q99570 1358 aa18.23■□□□□ 0.51
PCDHA3-202ENST00000532566 ZMYM4Q5VZL5 1548 aa18.23■□□□□ 0.51
PCDHA3-202ENST00000532566 HYPKQ9NX55 129 aa18.23■□□□□ 0.51
PCDHA3-202ENST00000532566 ZNF396Q96N95 335 aaPredicted RBP18.23■□□□□ 0.51
PCDHA3-202ENST00000532566 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.23■□□□□ 0.51
PCDHA3-202ENST00000532566 TTC22Q5TAA0 569 aa18.23■□□□□ 0.51
PCDHA3-202ENST00000532566 MEIS3Q99687 375 aa18.23■□□□□ 0.51
PCDHA3-202ENST00000532566 VAMP4O75379 141 aa18.22■□□□□ 0.51
PCDHA3-202ENST00000532566 CASTP20810 708 aaKnown RBP18.22■□□□□ 0.51
PCDHA3-202ENST00000532566 XBP1P17861 261 aa18.22■□□□□ 0.51
PCDHA3-202ENST00000532566 FKBP4Q02790 459 aaKnown RBP eCLIP18.22■□□□□ 0.51
PCDHA3-202ENST00000532566 ANKRD20A12PQ8NF67 263 aa18.22■□□□□ 0.51
PCDHA3-202ENST00000532566 PHACTR3Q96KR7 559 aa18.22■□□□□ 0.51
PCDHA3-202ENST00000532566 PDIA4P13667 645 aaKnown RBP18.21■□□□□ 0.51
PCDHA3-202ENST00000532566 VPS53Q5VIR6 699 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms