RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 DBF4Q9UBU7 674 aaPredicted RBP19.15■□□□□ 0.66
PPFIA1-222ENST00000532504 KAT6BQ8WYB5 2073 aa19.15■□□□□ 0.66
PPFIA1-222ENST00000532504 CEP126Q9P2H0 1117 aa19.15■□□□□ 0.66
PPFIA1-222ENST00000532504 RBM5P52756 815 aaKnown RBP eCLIP19.15■□□□□ 0.66
PPFIA1-222ENST00000532504 ERC1Q8IUD2 1116 aa19.14■□□□□ 0.66
PPFIA1-222ENST00000532504 FAM98CQ17RN3 349 aaKnown RBP19.14■□□□□ 0.65
PPFIA1-222ENST00000532504 PIP4K2AP48426 406 aaPredicted RBP19.14■□□□□ 0.65
PPFIA1-222ENST00000532504 IP6K1Q92551 441 aa19.14■□□□□ 0.65
PPFIA1-222ENST00000532504 ATP5J2-PTCD1G3V325 749 aa19.14■□□□□ 0.65
PPFIA1-222ENST00000532504 NFXL1Q6ZNB6 911 aa19.14■□□□□ 0.65
PPFIA1-222ENST00000532504 METP08581 1390 aa19.14■□□□□ 0.65
PPFIA1-222ENST00000532504 HECW2Q9P2P5 1572 aa19.14■□□□□ 0.65
PPFIA1-222ENST00000532504 TMEM57Q8N5G2 664 aa19.13■□□□□ 0.65
PPFIA1-222ENST00000532504 PUS7Q96PZ0 661 aaKnown RBP19.13■□□□□ 0.65
PPFIA1-222ENST00000532504 UGGT1Q9NYU2 1555 aa19.13■□□□□ 0.65
PPFIA1-222ENST00000532504 SNRPA1P09661 255 aaKnown RBP19.13■□□□□ 0.65
PPFIA1-222ENST00000532504 PDE4AP27815 886 aa19.13■□□□□ 0.65
PPFIA1-222ENST00000532504 NFATC2IPQ8NCF5 419 aa19.13■□□□□ 0.65
PPFIA1-222ENST00000532504 IL1RAPL2Q9NP60 686 aa19.13■□□□□ 0.65
PPFIA1-222ENST00000532504 MTHFSDQ2M296 383 aaKnown RBP19.13■□□□□ 0.65
PPFIA1-222ENST00000532504 MBIPQ9NS73 344 aa19.13■□□□□ 0.65
PPFIA1-222ENST00000532504 ABCC11Q96J66 1382 aa19.12■□□□□ 0.65
PPFIA1-222ENST00000532504 MVPQ14764 893 aaKnown RBP19.12■□□□□ 0.65
PPFIA1-222ENST00000532504 TEX13AQ9BXU3 409 aaPredicted RBP19.12■□□□□ 0.65
PPFIA1-222ENST00000532504 KDM5DQ9BY66 1539 aa19.12■□□□□ 0.65
PPFIA1-222ENST00000532504 EIF2AK4Q9P2K8 1649 aaKnown RBP19.12■□□□□ 0.65
PPFIA1-222ENST00000532504 FAM184AQ8NB25 1140 aa19.12■□□□□ 0.65
PPFIA1-222ENST00000532504 RNF20Q5VTR2 975 aa19.12■□□□□ 0.65
PPFIA1-222ENST00000532504 USP21Q9UK80 565 aa19.12■□□□□ 0.65
PPFIA1-222ENST00000532504 FKBP4Q02790 459 aaKnown RBP eCLIP19.11■□□□□ 0.65
PPFIA1-222ENST00000532504 CNTROBQ8N137 903 aa19.11■□□□□ 0.65
PPFIA1-222ENST00000532504 HYPKQ9NX55 129 aa19.11■□□□□ 0.65
PPFIA1-222ENST00000532504 EFCAB6Q5THR3 1501 aa19.11■□□□□ 0.65
PPFIA1-222ENST00000532504 AAMPQ13685 434 aa19.11■□□□□ 0.65
PPFIA1-222ENST00000532504 MAP4K4O95819 1239 aaPredicted RBP19.11■□□□□ 0.65
PPFIA1-222ENST00000532504 AKAP4Q5JQC9 854 aa19.1■□□□□ 0.65
PPFIA1-222ENST00000532504 INTS3Q68E01 1043 aaKnown RBP19.1■□□□□ 0.65
PPFIA1-222ENST00000532504 AACSQ86V21 672 aa19.1■□□□□ 0.65
PPFIA1-222ENST00000532504 CLASP1Q7Z460 1538 aa19.1■□□□□ 0.65
PPFIA1-222ENST00000532504 DNAAF4Q8WXU2 420 aa19.1■□□□□ 0.65
PPFIA1-222ENST00000532504 JARID2Q92833 1246 aaPredicted RBP19.1■□□□□ 0.65
PPFIA1-222ENST00000532504 RIMBP3CA6NJZ7 1639 aa19.1■□□□□ 0.65
PPFIA1-222ENST00000532504 RIMBP3BA6NNM3 1639 aa19.1■□□□□ 0.65
PPFIA1-222ENST00000532504 PREX2Q70Z35 1606 aa19.1■□□□□ 0.65
PPFIA1-222ENST00000532504 RIMBP3Q9UFD9 1639 aa19.1■□□□□ 0.65
PPFIA1-222ENST00000532504 A0A087WZG4 1122 aa19.1■□□□□ 0.65
PPFIA1-222ENST00000532504 FOXD4L6Q3SYB3 417 aaPredicted RBP19.1■□□□□ 0.65
PPFIA1-222ENST00000532504 FOXD4L3Q6VB84 417 aaPredicted RBP19.1■□□□□ 0.65
PPFIA1-222ENST00000532504 STK11IPQ8N1F8 1099 aa19.1■□□□□ 0.65
PPFIA1-222ENST00000532504 LRRCC1Q9C099 1032 aa19.1■□□□□ 0.65
PPFIA1-222ENST00000532504 CWC22Q9HCG8 908 aaKnown RBP19.1■□□□□ 0.65
PPFIA1-222ENST00000532504 ERICH2A1L162 156 aa19.1■□□□□ 0.65
PPFIA1-222ENST00000532504 RALYLQ86SE5 291 aaKnown RBP19.1■□□□□ 0.65
PPFIA1-222ENST00000532504 ASXL1Q8IXJ9 1541 aa19.1■□□□□ 0.65
PPFIA1-222ENST00000532504 H3BQV1 296 aa19.09■□□□□ 0.65
PPFIA1-222ENST00000532504 IFFO2Q5TF58 517 aa19.09■□□□□ 0.65
PPFIA1-222ENST00000532504 CPLX1O14810 134 aa19.09■□□□□ 0.65
PPFIA1-222ENST00000532504 METTL24Q5JXM2 366 aa19.09■□□□□ 0.65
PPFIA1-222ENST00000532504 WWC3Q9ULE0 1092 aa19.09■□□□□ 0.65
PPFIA1-222ENST00000532504 KIF3AQ9Y496 699 aa19.09■□□□□ 0.65
PPFIA1-222ENST00000532504 FLIIQ13045 1269 aa19.09■□□□□ 0.65
PPFIA1-222ENST00000532504 CHAF1AQ13111 956 aaPredicted RBP19.09■□□□□ 0.65
PPFIA1-222ENST00000532504 CPLX2Q6PUV4 134 aaKnown RBP19.09■□□□□ 0.65
PPFIA1-222ENST00000532504 PDZRN3Q9UPQ7 1066 aa19.09■□□□□ 0.65
PPFIA1-222ENST00000532504 HSP90AB3PQ58FF7 597 aa19.08■□□□□ 0.65
PPFIA1-222ENST00000532504 RPGRQ92834 1020 aaKnown RBP19.08■□□□□ 0.65
PPFIA1-222ENST00000532504 TRIM44Q96DX7 344 aaPredicted RBP19.08■□□□□ 0.65
PPFIA1-222ENST00000532504 ANKIB1Q9P2G1 1089 aa19.08■□□□□ 0.65
PPFIA1-222ENST00000532504 EXOC6BQ9Y2D4 811 aa19.08■□□□□ 0.64
PPFIA1-222ENST00000532504 MAP3K2Q9Y2U5 619 aa19.08■□□□□ 0.64
PPFIA1-222ENST00000532504 PLEKHG1Q9ULL1 1385 aa19.07■□□□□ 0.64
PPFIA1-222ENST00000532504 ADCY10Q96PN6 1610 aa19.07■□□□□ 0.64
PPFIA1-222ENST00000532504 RARSP54136 660 aaKnown RBP19.07■□□□□ 0.64
PPFIA1-222ENST00000532504 HTATSF1O43719 755 aaKnown RBP19.07■□□□□ 0.64
PPFIA1-222ENST00000532504 MCTP1Q6DN14 999 aa19.07■□□□□ 0.64
PPFIA1-222ENST00000532504 SMARCC1Q92922 1105 aaPredicted RBP19.07■□□□□ 0.64
PPFIA1-222ENST00000532504 TFCP2L1Q9NZI6 479 aa19.07■□□□□ 0.64
PPFIA1-222ENST00000532504 COL17A1Q9UMD9 1497 aaPredicted RBP19.07■□□□□ 0.64
PPFIA1-222ENST00000532504 PI4KAP2A4QPH2 592 aa19.06■□□□□ 0.64
PPFIA1-222ENST00000532504 RRP12Q5JTH9 1297 aaKnown RBP19.06■□□□□ 0.64
PPFIA1-222ENST00000532504 PI4KAP1Q8N8J0 262 aa19.06■□□□□ 0.64
PPFIA1-222ENST00000532504 ZNF622Q969S3 477 aaKnown RBP eCLIP19.06■□□□□ 0.641e-6■■□□□ 13.5
PPFIA1-222ENST00000532504 GCC1Q96CN9 775 aa19.05■□□□□ 0.64
PPFIA1-222ENST00000532504 PHACTR3Q96KR7 559 aa19.05■□□□□ 0.64
PPFIA1-222ENST00000532504 ERVK-7P63135 1459 aa19.05■□□□□ 0.64
PPFIA1-222ENST00000532504 IFIT5Q13325 482 aaKnown RBP19.05■□□□□ 0.64
PPFIA1-222ENST00000532504 SF3A1Q15459 793 aaKnown RBP19.05■□□□□ 0.64
PPFIA1-222ENST00000532504 ABCF2Q9UG63 623 aa19.05■□□□□ 0.64
PPFIA1-222ENST00000532504 IKQ13123 557 aaPredicted RBP19.05■□□□□ 0.64
PPFIA1-222ENST00000532504 GBP4Q96PP9 640 aa19.05■□□□□ 0.64
PPFIA1-222ENST00000532504 ARHGEF10O15013 1369 aa19.05■□□□□ 0.64
PPFIA1-222ENST00000532504 SLC4A3P48751 1232 aa19.04■□□□□ 0.64
PPFIA1-222ENST00000532504 RAI14Q9P0K7 980 aa19.04■□□□□ 0.64
PPFIA1-222ENST00000532504 NBPF6Q5VWK0 638 aa19.04■□□□□ 0.64
PPFIA1-222ENST00000532504 NBPF5PQ86XG9 351 aaPredicted RBP19.04■□□□□ 0.64
PPFIA1-222ENST00000532504 NBPF4Q96M43 638 aa19.04■□□□□ 0.64
PPFIA1-222ENST00000532504 CHPF2Q9P2E5 772 aa19.04■□□□□ 0.64
PPFIA1-222ENST00000532504 SIRT1Q96EB6 747 aa19.04■□□□□ 0.64
PPFIA1-222ENST00000532504 KDM4AO75164 1064 aa19.03■□□□□ 0.64
PPFIA1-222ENST00000532504 CDC45O75419 566 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms