RNA–Protein interactions for RNA: ENST00000532289.1

PTP4A2-214, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-214ENST00000532289 CCNL1Q9UK58 526 aaPredicted RBP28.17■■■□□ 2.1
PTP4A2-214ENST00000532289 WDR90Q96KV7 1748 aa28.17■■■□□ 2.1
PTP4A2-214ENST00000532289 RAB3GAP2Q9H2M9 1393 aa28.16■■■□□ 2.1
PTP4A2-214ENST00000532289 ANKRD24Q8TF21 1146 aa28.16■■■□□ 2.1
PTP4A2-214ENST00000532289 PRELPP51888 382 aa28.15■■■□□ 2.1
PTP4A2-214ENST00000532289 USP54Q70EL1 1684 aa28.14■■■□□ 2.1
PTP4A2-214ENST00000532289 IGSF1Q8N6C5 1336 aa28.13■■■□□ 2.09
PTP4A2-214ENST00000532289 JMYQ8N9B5 988 aa28.11■■■□□ 2.09
PTP4A2-214ENST00000532289 EVC2Q86UK5 1308 aa28.11■■■□□ 2.09
PTP4A2-214ENST00000532289 PCNTO95613 3336 aa28.11■■■□□ 2.09
PTP4A2-214ENST00000532289 USP31Q70CQ4 1352 aa28.11■■■□□ 2.09
PTP4A2-214ENST00000532289 CICQ96RK0 1608 aaPredicted RBP28.1■■■□□ 2.09
PTP4A2-214ENST00000532289 C5P01031 1676 aa28.1■■■□□ 2.09
PTP4A2-214ENST00000532289 TNS4Q8IZW8 715 aa28.1■■■□□ 2.09
PTP4A2-214ENST00000532289 KLRG1Q96E93 195 aa28.09■■■□□ 2.09
PTP4A2-214ENST00000532289 WWC3Q9ULE0 1092 aa28.09■■■□□ 2.09
PTP4A2-214ENST00000532289 KTN1Q86UP2 1357 aaKnown RBP28.09■■■□□ 2.09
PTP4A2-214ENST00000532289 MON2Q7Z3U7 1717 aa28.08■■■□□ 2.09
PTP4A2-214ENST00000532289 FLAD1Q8NFF5 587 aa28.07■■■□□ 2.08
PTP4A2-214ENST00000532289 TAF1LQ8IZX4 1826 aa28.05■■■□□ 2.08
PTP4A2-214ENST00000532289 FAM208AQ9UK61 1670 aaKnown RBP28.05■■■□□ 2.08
PTP4A2-214ENST00000532289 USP47Q96K76 1375 aa28.04■■■□□ 2.08
PTP4A2-214ENST00000532289 HTRA3P83110 453 aa28.01■■■□□ 2.07
PTP4A2-214ENST00000532289 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28■■■□□ 2.07
PTP4A2-214ENST00000532289 NME9Q86XW9 330 aa27.99■■■□□ 2.07
PTP4A2-214ENST00000532289 RBM46Q8TBY0 533 aaKnown RBP27.99■■■□□ 2.07
PTP4A2-214ENST00000532289 NMRK2Q9NPI5 230 aa27.99■■■□□ 2.07
PTP4A2-214ENST00000532289 TOGARAM1Q9Y4F4 1720 aa27.97■■■□□ 2.07
PTP4A2-214ENST00000532289 HMGB2P26583 209 aaKnown RBP27.96■■■□□ 2.07
PTP4A2-214ENST00000532289 ZCRB1Q8TBF4 217 aaKnown RBP27.96■■■□□ 2.07
PTP4A2-214ENST00000532289 IP6K1Q92551 441 aa27.95■■■□□ 2.06
PTP4A2-214ENST00000532289 C4BP0C0L5 1744 aa27.95■■■□□ 2.06
PTP4A2-214ENST00000532289 UBR3Q6ZT12 1888 aa27.94■■■□□ 2.06
PTP4A2-214ENST00000532289 AMIGO3Q86WK7 504 aa27.93■■■□□ 2.06
PTP4A2-214ENST00000532289 SBNO2Q9Y2G9 1366 aa27.93■■■□□ 2.06
PTP4A2-214ENST00000532289 RGPD2P0DJD1 1756 aa27.92■■■□□ 2.06
PTP4A2-214ENST00000532289 LTV1Q96GA3 475 aaPredicted RBP27.92■■■□□ 2.06
PTP4A2-214ENST00000532289 FSTL1Q12841 308 aa27.91■■■□□ 2.06
PTP4A2-214ENST00000532289 MEGF6O75095 1541 aa27.91■■■□□ 2.06
PTP4A2-214ENST00000532289 KIAA1551Q9HCM1 1747 aa27.9■■■□□ 2.06
PTP4A2-214ENST00000532289 KIF13BQ9NQT8 1826 aa27.9■■■□□ 2.06
PTP4A2-214ENST00000532289 CD163L1Q9NR16 1453 aa27.89■■■□□ 2.06
PTP4A2-214ENST00000532289 PALLDQ8WX93 1383 aa27.87■■■□□ 2.05
PTP4A2-214ENST00000532289 N4BP2Q86UW6 1770 aaPredicted RBP27.87■■■□□ 2.05
PTP4A2-214ENST00000532289 SLC34A2O95436 690 aa27.87■■■□□ 2.05
PTP4A2-214ENST00000532289 AK7Q96M32 723 aa27.87■■■□□ 2.05
PTP4A2-214ENST00000532289 C16orf71Q8IYS4 520 aaPredicted RBP27.86■■■□□ 2.05
PTP4A2-214ENST00000532289 PXDNLA1KZ92 1463 aa27.86■■■□□ 2.05
PTP4A2-214ENST00000532289 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.85■■■□□ 2.05
PTP4A2-214ENST00000532289 SMIM5Q71RC9 77 aa27.85■■■□□ 2.05
PTP4A2-214ENST00000532289 PHF14O94880 888 aa27.84■■■□□ 2.05
PTP4A2-214ENST00000532289 NSD3Q9BZ95 1437 aa27.84■■■□□ 2.05
PTP4A2-214ENST00000532289 ARHGAP27Q6ZUM4 889 aa27.82■■■□□ 2.04
PTP4A2-214ENST00000532289 BCS1LQ9Y276 419 aa27.82■■■□□ 2.04
PTP4A2-214ENST00000532289 SSFA2P28290 1259 aa27.8■■■□□ 2.04
PTP4A2-214ENST00000532289 TGFB2P61812 414 aa27.8■■■□□ 2.04
PTP4A2-214ENST00000532289 EDC4Q6P2E9 1401 aaKnown RBP27.8■■■□□ 2.04
PTP4A2-214ENST00000532289 CGNL1Q0VF96 1302 aa27.79■■■□□ 2.04
PTP4A2-214ENST00000532289 BRCA1P38398 1863 aaKnown RBP27.78■■■□□ 2.04
PTP4A2-214ENST00000532289 ITGB4P16144 1822 aa27.78■■■□□ 2.04
PTP4A2-214ENST00000532289 PLEKHG2Q9H7P9 1386 aa27.78■■■□□ 2.04
PTP4A2-214ENST00000532289 HOXC9P31274 260 aa27.78■■■□□ 2.04
PTP4A2-214ENST00000532289 PKD1L3Q7Z443 1732 aa27.78■■■□□ 2.04
PTP4A2-214ENST00000532289 C10orf71Q711Q0 1435 aa27.77■■■□□ 2.04
PTP4A2-214ENST00000532289 HSPA1AP0DMV8 641 aaKnown RBP27.77■■■□□ 2.04
PTP4A2-214ENST00000532289 HSPA1BP0DMV9 641 aaKnown RBP27.77■■■□□ 2.04
PTP4A2-214ENST00000532289 MPRIPQ6WCQ1 1025 aa27.77■■■□□ 2.04
PTP4A2-214ENST00000532289 A0A0G2JLW4 131 aa27.76■■■□□ 2.03
PTP4A2-214ENST00000532289 C9orf131Q5VYM1 1079 aa27.76■■■□□ 2.03
PTP4A2-214ENST00000532289 MAP2P11137 1827 aaKnown RBP27.76■■■□□ 2.03
PTP4A2-214ENST00000532289 MAP3K19Q56UN5 1328 aa27.75■■■□□ 2.03
PTP4A2-214ENST00000532289 HDGFL2Q7Z4V5 671 aaPredicted RBP27.75■■■□□ 2.03
PTP4A2-214ENST00000532289 SMARCC1Q92922 1105 aaPredicted RBP27.75■■■□□ 2.03
PTP4A2-214ENST00000532289 KCPQ6ZWJ8 1503 aa27.75■■■□□ 2.03
PTP4A2-214ENST00000532289 MMP10P09238 476 aa27.74■■■□□ 2.03
PTP4A2-214ENST00000532289 TNRC6CQ9HCJ0 1690 aaKnown RBP27.74■■■□□ 2.03
PTP4A2-214ENST00000532289 ARFGEF1Q9Y6D6 1849 aa27.74■■■□□ 2.03
PTP4A2-214ENST00000532289 KDM2BQ8NHM5 1336 aa27.73■■■□□ 2.03
PTP4A2-214ENST00000532289 NBPF6Q5VWK0 638 aa27.72■■■□□ 2.03
PTP4A2-214ENST00000532289 NBPF4Q96M43 638 aa27.72■■■□□ 2.03
PTP4A2-214ENST00000532289 FCHSD2O94868 740 aa27.71■■■□□ 2.03
PTP4A2-214ENST00000532289 AMPHP49418 695 aa27.71■■■□□ 2.03
PTP4A2-214ENST00000532289 LINC00116Q8NCU8 138 aa27.71■■■□□ 2.03
PTP4A2-214ENST00000532289 TMC1Q8TDI8 760 aa27.71■■■□□ 2.03
PTP4A2-214ENST00000532289 RRAGCQ9HB90 399 aa27.71■■■□□ 2.03
PTP4A2-214ENST00000532289 PCDH11XQ9BZA7 1347 aa27.7■■■□□ 2.03
PTP4A2-214ENST00000532289 PCDH11YQ9BZA8 1340 aa27.7■■■□□ 2.03
PTP4A2-214ENST00000532289 SMC1BQ8NDV3 1235 aa27.7■■■□□ 2.02
PTP4A2-214ENST00000532289 RAPGEF4Q8WZA2 1011 aa27.7■■■□□ 2.02
PTP4A2-214ENST00000532289 SLC12A5Q9H2X9 1139 aa27.7■■■□□ 2.02
PTP4A2-214ENST00000532289 DPEP1P16444 411 aa27.69■■■□□ 2.02
PTP4A2-214ENST00000532289 USHBP1Q8N6Y0 703 aa27.68■■■□□ 2.02
PTP4A2-214ENST00000532289 A0A1W2PP64 1363 aa27.68■■■□□ 2.02
PTP4A2-214ENST00000532289 FBLN1P23142 703 aa27.67■■■□□ 2.02
PTP4A2-214ENST00000532289 ROCK2O75116 1388 aaKnown RBP27.67■■■□□ 2.02
PTP4A2-214ENST00000532289 TATP17735 454 aaPredicted RBP27.66■■■□□ 2.02
PTP4A2-214ENST00000532289 GNPATO15228 680 aa27.65■■■□□ 2.02
PTP4A2-214ENST00000532289 PIGBQ92521 554 aa27.65■■■□□ 2.02
PTP4A2-214ENST00000532289 L3MBTL2Q969R5 705 aa27.65■■■□□ 2.02
PTP4A2-214ENST00000532289 TERF2IPQ9NYB0 399 aa27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms