RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 TATP17735 454 aaPredicted RBP16.07■□□□□ 0.16
LTBP3-219ENST00000530990 IL13P35225 146 aa16.07■□□□□ 0.16
LTBP3-219ENST00000530990 TOGARAM1Q9Y4F4 1720 aa16.07■□□□□ 0.16
LTBP3-219ENST00000530990 RGPD3A6NKT7 1758 aaPredicted RBP16.07■□□□□ 0.16
LTBP3-219ENST00000530990 RGPD4Q7Z3J3 1758 aa16.07■□□□□ 0.16
LTBP3-219ENST00000530990 BTAF1O14981 1849 aa16.06■□□□□ 0.16
LTBP3-219ENST00000530990 PPP2R1AP30153 589 aa16.06■□□□□ 0.16
LTBP3-219ENST00000530990 SF3B2Q13435 895 aaKnown RBP16.06■□□□□ 0.16
LTBP3-219ENST00000530990 KAT6BQ8WYB5 2073 aa16.06■□□□□ 0.16
LTBP3-219ENST00000530990 RREB1Q92766 1687 aa16.05■□□□□ 0.16
LTBP3-219ENST00000530990 ZNF316A6NFI3 1004 aaPredicted RBP16.05■□□□□ 0.16
LTBP3-219ENST00000530990 DEFB132Q7Z7B7 95 aa16.05■□□□□ 0.16
LTBP3-219ENST00000530990 ZCRB1Q8TBF4 217 aaKnown RBP16.05■□□□□ 0.16
LTBP3-219ENST00000530990 DDX54Q8TDD1 881 aaKnown RBP16.05■□□□□ 0.16
LTBP3-219ENST00000530990 AEBP1Q8IUX7 1158 aa16.04■□□□□ 0.16
LTBP3-219ENST00000530990 KDRP35968 1356 aa16.03■□□□□ 0.16
LTBP3-219ENST00000530990 PCDH11XQ9BZA7 1347 aa16.03■□□□□ 0.16
LTBP3-219ENST00000530990 PCDH11YQ9BZA8 1340 aa16.03■□□□□ 0.16
LTBP3-219ENST00000530990 DIAPH1O60610 1272 aaKnown RBP16.03■□□□□ 0.16
LTBP3-219ENST00000530990 ITGB4P16144 1822 aa16.03■□□□□ 0.16
LTBP3-219ENST00000530990 NUP188Q5SRE5 1749 aa16.02■□□□□ 0.16
LTBP3-219ENST00000530990 BAG6P46379 1132 aa16.02■□□□□ 0.16
LTBP3-219ENST00000530990 PTF1AQ7RTS3 328 aa16.02■□□□□ 0.16
LTBP3-219ENST00000530990 VIRMAQ69YN4 1812 aaKnown RBP16.02■□□□□ 0.16
LTBP3-219ENST00000530990 PLEKHG2Q9H7P9 1386 aa16.01■□□□□ 0.15
LTBP3-219ENST00000530990 SULT6B1Q6IMI4 303 aa16.01■□□□□ 0.15
LTBP3-219ENST00000530990 ACSBG1Q96GR2 724 aa16.01■□□□□ 0.15
LTBP3-219ENST00000530990 CYP27B1O15528 508 aa16■□□□□ 0.15
LTBP3-219ENST00000530990 APBA3O96018 575 aa16■□□□□ 0.15
LTBP3-219ENST00000530990 EN1Q05925 392 aaPredicted RBP16■□□□□ 0.15
LTBP3-219ENST00000530990 CFAP53Q96M91 514 aa16■□□□□ 0.15
LTBP3-219ENST00000530990 KCNQ2O43526 872 aa15.99■□□□□ 0.15
LTBP3-219ENST00000530990 BCL11BQ9C0K0 894 aaPredicted RBP15.99■□□□□ 0.15
LTBP3-219ENST00000530990 SPG7Q9UQ90 795 aa15.99■□□□□ 0.15
LTBP3-219ENST00000530990 HMOX1P09601 288 aa15.98■□□□□ 0.15
LTBP3-219ENST00000530990 RALBP1Q15311 655 aa15.98■□□□□ 0.15
LTBP3-219ENST00000530990 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.98■□□□□ 0.15
LTBP3-219ENST00000530990 U2SURPO15042 1029 aaKnown RBP15.97■□□□□ 0.15
LTBP3-219ENST00000530990 SCN11AQ9UI33 1791 aa15.96■□□□□ 0.15
LTBP3-219ENST00000530990 EZH2Q15910 746 aaKnown RBP15.96■□□□□ 0.15
LTBP3-219ENST00000530990 CAMKK2Q96RR4 588 aa15.96■□□□□ 0.15
LTBP3-219ENST00000530990 LY75O60449 1722 aa15.96■□□□□ 0.15
LTBP3-219ENST00000530990 MYBBP1AQ9BQG0 1328 aaKnown RBP15.95■□□□□ 0.14
LTBP3-219ENST00000530990 PHKG2P15735 406 aa15.95■□□□□ 0.14
LTBP3-219ENST00000530990 PLEKHO1Q53GL0 409 aaPredicted RBP15.94■□□□□ 0.14
LTBP3-219ENST00000530990 IFNL2Q8IZJ0 200 aa15.94■□□□□ 0.14
LTBP3-219ENST00000530990 SYTL4Q96C24 671 aaPredicted RBP15.94■□□□□ 0.14
LTBP3-219ENST00000530990 PRIM1P49642 420 aaKnown RBP15.93■□□□□ 0.14
LTBP3-219ENST00000530990 NKX1-1Q15270 411 aaPredicted RBP15.93■□□□□ 0.14
LTBP3-219ENST00000530990 AMOTQ4VCS5 1084 aa15.93■□□□□ 0.14
LTBP3-219ENST00000530990 ZNF530Q6P9A1 599 aaPredicted RBP15.93■□□□□ 0.14
LTBP3-219ENST00000530990 PRKRIP1Q9H875 184 aaPredicted RBP15.93■□□□□ 0.14
LTBP3-219ENST00000530990 KDM6AO15550 1401 aaPredicted RBP15.93■□□□□ 0.14
LTBP3-219ENST00000530990 ADAMTS7Q9UKP4 1686 aa15.92■□□□□ 0.14
LTBP3-219ENST00000530990 PLSCR1O15162 318 aa15.92■□□□□ 0.14
LTBP3-219ENST00000530990 NUDCQ9Y266 331 aa15.92■□□□□ 0.14
LTBP3-219ENST00000530990 PAPPAQ13219 1627 aa15.91■□□□□ 0.14
LTBP3-219ENST00000530990 SRCAPQ6ZRS2 3230 aa15.91■□□□□ 0.14
LTBP3-219ENST00000530990 U2AF1L5P0DN76 240 aaPredicted RBP15.9■□□□□ 0.14
LTBP3-219ENST00000530990 U2AF1Q01081 240 aaKnown RBP eCLIP15.9■□□□□ 0.14
LTBP3-219ENST00000530990 RSPH6AQ9H0K4 717 aa15.9■□□□□ 0.14
LTBP3-219ENST00000530990 PRKAR2BP31323 418 aa15.89■□□□□ 0.13
LTBP3-219ENST00000530990 C1orf141Q5JVX7 400 aa15.89■□□□□ 0.13
LTBP3-219ENST00000530990 DLG5Q8TDM6 1919 aa15.89■□□□□ 0.13
LTBP3-219ENST00000530990 MTHFSDQ2M296 383 aaKnown RBP15.88■□□□□ 0.13
LTBP3-219ENST00000530990 TAF1LQ8IZX4 1826 aa15.88■□□□□ 0.13
LTBP3-219ENST00000530990 MRC1P22897 1456 aa15.88■□□□□ 0.13
LTBP3-219ENST00000530990 C5P01031 1676 aa15.88■□□□□ 0.13
LTBP3-219ENST00000530990 HSP90AB1P08238 724 aaKnown RBP15.87■□□□□ 0.13
LTBP3-219ENST00000530990 TXNRD1Q16881 649 aa15.87■□□□□ 0.13
LTBP3-219ENST00000530990 AKAP4Q5JQC9 854 aa15.87■□□□□ 0.13
LTBP3-219ENST00000530990 MPRIPQ6WCQ1 1025 aa15.87■□□□□ 0.13
LTBP3-219ENST00000530990 PROM2Q8N271 834 aa15.87■□□□□ 0.13
LTBP3-219ENST00000530990 DCAF5Q96JK2 942 aa15.87■□□□□ 0.13
LTBP3-219ENST00000530990 TUBGCP6Q96RT7 1819 aa15.87■□□□□ 0.13
LTBP3-219ENST00000530990 SIPA1L3O60292 1781 aaPredicted RBP15.86■□□□□ 0.13
LTBP3-219ENST00000530990 FCHSD2O94868 740 aa15.85■□□□□ 0.13
LTBP3-219ENST00000530990 PIGBQ92521 554 aa15.85■□□□□ 0.13
LTBP3-219ENST00000530990 PHACTR3Q96KR7 559 aa15.85■□□□□ 0.13
LTBP3-219ENST00000530990 TMOD3Q9NYL9 352 aa15.85■□□□□ 0.13
LTBP3-219ENST00000530990 PALLDQ8WX93 1383 aa15.85■□□□□ 0.13
LTBP3-219ENST00000530990 MAP3K5Q99683 1374 aa15.85■□□□□ 0.13
LTBP3-219ENST00000530990 ANO8Q9HCE9 1232 aaPredicted RBP15.84■□□□□ 0.13
LTBP3-219ENST00000530990 PSDA5PKW4 1024 aaPredicted RBP15.83■□□□□ 0.12
LTBP3-219ENST00000530990 GAS2L2Q8NHY3 880 aa15.83■□□□□ 0.12
LTBP3-219ENST00000530990 QSER1Q2KHR3 1735 aa15.82■□□□□ 0.12
LTBP3-219ENST00000530990 ERVV-2B6SEH9 535 aa15.82■□□□□ 0.12
LTBP3-219ENST00000530990 LRRC4BQ9NT99 713 aa15.82■□□□□ 0.12
LTBP3-219ENST00000530990 ZNF831Q5JPB2 1677 aa15.82■□□□□ 0.12
LTBP3-219ENST00000530990 CASZ1Q86V15 1759 aa15.82■□□□□ 0.12
LTBP3-219ENST00000530990 RNMTO43148 476 aaKnown RBP15.81■□□□□ 0.12
LTBP3-219ENST00000530990 ANP32CO43423 234 aa15.81■□□□□ 0.12
LTBP3-219ENST00000530990 KCNQ4P56696 695 aa15.81■□□□□ 0.12
LTBP3-219ENST00000530990 CABP4P57796 275 aa15.81■□□□□ 0.12
LTBP3-219ENST00000530990 R3HDM1Q15032 1099 aaKnown RBP15.81■□□□□ 0.12
LTBP3-219ENST00000530990 UBR2Q8IWV8 1755 aa15.81■□□□□ 0.12
LTBP3-219ENST00000530990 LGR6Q9HBX8 967 aa15.81■□□□□ 0.12
LTBP3-219ENST00000530990 COL5A3P25940 1745 aaPredicted RBP15.8■□□□□ 0.12
LTBP3-219ENST00000530990 SLC27A3Q5K4L6 730 aa15.8■□□□□ 0.12
LTBP3-219ENST00000530990 NBPF14Q5TI25 921 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms