RNA–Protein interactions for RNA: ENST00000530981.1

SF3B2-210, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-210ENST00000530981 CYP27B1O15528 508 aa12.46□□□□□ -0.41
SF3B2-210ENST00000530981 DDX54Q8TDD1 881 aaKnown RBP12.46□□□□□ -0.41
SF3B2-210ENST00000530981 SULT6B1Q6IMI4 303 aa12.45□□□□□ -0.42
SF3B2-210ENST00000530981 FAM196AQ6ZSG2 479 aa12.45□□□□□ -0.42
SF3B2-210ENST00000530981 ZCRB1Q8TBF4 217 aaKnown RBP12.45□□□□□ -0.42
SF3B2-210ENST00000530981 HMOX1P09601 288 aa12.44□□□□□ -0.42
SF3B2-210ENST00000530981 PKD1L3Q7Z443 1732 aa12.44□□□□□ -0.42
SF3B2-210ENST00000530981 KDRP35968 1356 aa12.43□□□□□ -0.42
SF3B2-210ENST00000530981 DIAPH1O60610 1272 aaKnown RBP12.43□□□□□ -0.42
SF3B2-210ENST00000530981 CCDC184Q52MB2 194 aa12.43□□□□□ -0.42
SF3B2-210ENST00000530981 RAPGEF4Q8WZA2 1011 aa12.43□□□□□ -0.42
SF3B2-210ENST00000530981 ACSBG1Q96GR2 724 aa12.43□□□□□ -0.42
SF3B2-210ENST00000530981 BCL9O00512 1426 aa12.43□□□□□ -0.42
SF3B2-210ENST00000530981 TATP17735 454 aaPredicted RBP12.42□□□□□ -0.42
SF3B2-210ENST00000530981 PRKRIP1Q9H875 184 aaPredicted RBP12.42□□□□□ -0.42
SF3B2-210ENST00000530981 KAT6BQ8WYB5 2073 aa12.42□□□□□ -0.42
SF3B2-210ENST00000530981 TOGARAM1Q9Y4F4 1720 aa12.42□□□□□ -0.42
SF3B2-210ENST00000530981 EN1Q05925 392 aaPredicted RBP12.41□□□□□ -0.42
SF3B2-210ENST00000530981 RALBP1Q15311 655 aa12.4□□□□□ -0.42
SF3B2-210ENST00000530981 PROM2Q8N271 834 aa12.4□□□□□ -0.42
SF3B2-210ENST00000530981 PHACTR3Q96KR7 559 aa12.4□□□□□ -0.42
SF3B2-210ENST00000530981 CAMKK2Q96RR4 588 aa12.4□□□□□ -0.42
SF3B2-210ENST00000530981 U2SURPO15042 1029 aaKnown RBP12.39□□□□□ -0.43
SF3B2-210ENST00000530981 PRIM1P49642 420 aaKnown RBP12.39□□□□□ -0.43
SF3B2-210ENST00000530981 EZH2Q15910 746 aaKnown RBP12.39□□□□□ -0.43
SF3B2-210ENST00000530981 BCL11BQ9C0K0 894 aaPredicted RBP12.39□□□□□ -0.43
SF3B2-210ENST00000530981 DOT1LQ8TEK3 1739 aa12.39□□□□□ -0.43
SF3B2-210ENST00000530981 NHSQ6T4R5 1651 aa12.38□□□□□ -0.43
SF3B2-210ENST00000530981 APBA3O96018 575 aa12.38□□□□□ -0.43
SF3B2-210ENST00000530981 PHKG2P15735 406 aa12.38□□□□□ -0.43
SF3B2-210ENST00000530981 CCDC125Q86Z20 511 aa12.38□□□□□ -0.43
SF3B2-210ENST00000530981 RSPH6AQ9H0K4 717 aa12.38□□□□□ -0.43
SF3B2-210ENST00000530981 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.38□□□□□ -0.431e-10■■■□□ 16
SF3B2-210ENST00000530981 BTAF1O14981 1849 aa12.37□□□□□ -0.43
SF3B2-210ENST00000530981 NKX1-1Q15270 411 aaPredicted RBP12.37□□□□□ -0.43
SF3B2-210ENST00000530981 MTHFSDQ2M296 383 aaKnown RBP12.37□□□□□ -0.43
SF3B2-210ENST00000530981 ITGB4P16144 1822 aa12.37□□□□□ -0.43
SF3B2-210ENST00000530981 KDM6AO15550 1401 aaPredicted RBP12.37□□□□□ -0.43
SF3B2-210ENST00000530981 MYBBP1AQ9BQG0 1328 aaKnown RBP12.37□□□□□ -0.43
SF3B2-210ENST00000530981 PCDH11XQ9BZA7 1347 aa12.37□□□□□ -0.43
SF3B2-210ENST00000530981 PCDH11YQ9BZA8 1340 aa12.37□□□□□ -0.43
SF3B2-210ENST00000530981 SPG7Q9UQ90 795 aa12.36□□□□□ -0.43
SF3B2-210ENST00000530981 PRKAR2BP31323 418 aa12.35□□□□□ -0.43
SF3B2-210ENST00000530981 KCNQ4P56696 695 aa12.35□□□□□ -0.43
SF3B2-210ENST00000530981 LGR6Q9HBX8 967 aa12.35□□□□□ -0.43
SF3B2-210ENST00000530981 U2AF1L5P0DN76 240 aaPredicted RBP12.34□□□□□ -0.43
SF3B2-210ENST00000530981 U2AF1Q01081 240 aaKnown RBP eCLIP12.34□□□□□ -0.43
SF3B2-210ENST00000530981 PLEKHO1Q53GL0 409 aaPredicted RBP12.34□□□□□ -0.43
SF3B2-210ENST00000530981 ZNF530Q6P9A1 599 aaPredicted RBP12.34□□□□□ -0.43
SF3B2-210ENST00000530981 MPRIPQ6WCQ1 1025 aa12.34□□□□□ -0.43
SF3B2-210ENST00000530981 CFAP53Q96M91 514 aa12.34□□□□□ -0.43
SF3B2-210ENST00000530981 RREB1Q92766 1687 aa12.33□□□□□ -0.44
SF3B2-210ENST00000530981 IFNL2Q8IZJ0 200 aa12.33□□□□□ -0.44
SF3B2-210ENST00000530981 PIGBQ92521 554 aa12.33□□□□□ -0.44
SF3B2-210ENST00000530981 SYTL4Q96C24 671 aaPredicted RBP12.33□□□□□ -0.44
SF3B2-210ENST00000530981 PLEKHF1Q96S99 279 aa12.33□□□□□ -0.44
SF3B2-210ENST00000530981 LRRC4BQ9NT99 713 aa12.33□□□□□ -0.44
SF3B2-210ENST00000530981 NUP188Q5SRE5 1749 aa12.32□□□□□ -0.44
SF3B2-210ENST00000530981 PLSCR1O15162 318 aa12.32□□□□□ -0.44
SF3B2-210ENST00000530981 BAG6P46379 1132 aa12.32□□□□□ -0.44
SF3B2-210ENST00000530981 SF3B2Q13435 895 aaKnown RBP12.32□□□□□ -0.44
SF3B2-210ENST00000530981 VIRMAQ69YN4 1812 aaKnown RBP12.32□□□□□ -0.44
SF3B2-210ENST00000530981 FCHSD2O94868 740 aa12.31□□□□□ -0.44
SF3B2-210ENST00000530981 AMOTQ4VCS5 1084 aa12.31□□□□□ -0.44
SF3B2-210ENST00000530981 IL17REQ8NFR9 667 aa12.31□□□□□ -0.44
SF3B2-210ENST00000530981 PLEKHG2Q9H7P9 1386 aa12.3□□□□□ -0.44
SF3B2-210ENST00000530981 SCN11AQ9UI33 1791 aa12.3□□□□□ -0.44
SF3B2-210ENST00000530981 ADAMTS7Q9UKP4 1686 aa12.3□□□□□ -0.44
SF3B2-210ENST00000530981 TXNRD1Q16881 649 aa12.3□□□□□ -0.44
SF3B2-210ENST00000530981 ANO8Q9HCE9 1232 aaPredicted RBP12.3□□□□□ -0.44
SF3B2-210ENST00000530981 ASAP1Q9ULH1 1129 aa12.3□□□□□ -0.44
SF3B2-210ENST00000530981 ADAMTS8Q9UP79 889 aa12.3□□□□□ -0.44
SF3B2-210ENST00000530981 LY75O60449 1722 aa12.29□□□□□ -0.44
SF3B2-210ENST00000530981 NFATC2IPQ8NCF5 419 aa12.29□□□□□ -0.44
SF3B2-210ENST00000530981 DCAF5Q96JK2 942 aa12.29□□□□□ -0.44
SF3B2-210ENST00000530981 SLC4A9Q96Q91 983 aa12.29□□□□□ -0.44
SF3B2-210ENST00000530981 PDGFDQ9GZP0 370 aaPredicted RBP12.29□□□□□ -0.44
SF3B2-210ENST00000530981 ATG3Q9NT62 314 aa12.29□□□□□ -0.44
SF3B2-210ENST00000530981 NUDCQ9Y266 331 aa12.29□□□□□ -0.44
SF3B2-210ENST00000530981 SRCAPQ6ZRS2 3230 aa12.28□□□□□ -0.44
SF3B2-210ENST00000530981 RGPD3A6NKT7 1758 aaPredicted RBP12.28□□□□□ -0.44
SF3B2-210ENST00000530981 RGPD4Q7Z3J3 1758 aa12.28□□□□□ -0.44
SF3B2-210ENST00000530981 RNMTO43148 476 aaKnown RBP12.28□□□□□ -0.44
SF3B2-210ENST00000530981 DCTN1Q14203 1278 aa12.28□□□□□ -0.44
SF3B2-210ENST00000530981 AKAP4Q5JQC9 854 aa12.28□□□□□ -0.44
SF3B2-210ENST00000530981 CCDC146Q8IYE0 955 aa12.28□□□□□ -0.44
SF3B2-210ENST00000530981 DLG5Q8TDM6 1919 aa12.28□□□□□ -0.44
SF3B2-210ENST00000530981 PAPPAQ13219 1627 aa12.27□□□□□ -0.44
SF3B2-210ENST00000530981 SENP3-EIF4A1A0A087X0R7 540 aa12.27□□□□□ -0.45
SF3B2-210ENST00000530981 PSDA5PKW4 1024 aaPredicted RBP12.27□□□□□ -0.45
SF3B2-210ENST00000530981 ERVV-2B6SEH9 535 aa12.27□□□□□ -0.45
SF3B2-210ENST00000530981 ZNF827Q17R98 1081 aa12.26□□□□□ -0.45
SF3B2-210ENST00000530981 C1orf141Q5JVX7 400 aa12.26□□□□□ -0.45
SF3B2-210ENST00000530981 SMIM5Q71RC9 77 aa12.26□□□□□ -0.45
SF3B2-210ENST00000530981 MCM10Q7L590 875 aa12.26□□□□□ -0.45
SF3B2-210ENST00000530981 AMIGO3Q86WK7 504 aa12.26□□□□□ -0.45
SF3B2-210ENST00000530981 PNISRQ8TF01 805 aaKnown RBP12.26□□□□□ -0.45
SF3B2-210ENST00000530981 TMOD3Q9NYL9 352 aa12.26□□□□□ -0.45
SF3B2-210ENST00000530981 ANP32CO43423 234 aa12.25□□□□□ -0.45
SF3B2-210ENST00000530981 KCNQ3O43525 872 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms